BAC Information

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BAC

Clone NameB6Ng01-276B20
Chromosome1 (Build37)
Map Location 150,443,621 - 150,563,477
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276B20.bB6Ng01-276B20.g
ACCGA076974GA076975
length1,1401,134
definitionB6Ng01-276B20.b B6Ng01-276B20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,562,321 - 150,563,477)(150,443,621 - 150,444,671)
sequence
gaattctccttacaggaatgcattcctgaactatgttctgatacctgagg
acaggtcagaagagggcaggggtaaagagaagaagcctaagttgcagcaa
tgaccccagaaattggaggtatctgaaagttgggtgtccaccaagaacag
cagttgtgaggtagagcttgtgagatgaaatatgtttgctgtgaatggca
gaatcagagagagaattatctaaaaaaaacatttcattcagaggactttg
agtaaattttaatttttaatatatgtattaatatttattaatccaaaagt
cacctttgacaaacatcacaaagatgctcaataattagatattattcttc
aatgtatagcataactaatattttatttatatttatgtttattttattgt
gtttttctgtctgtttatctgtgaagagtttgtgtatatttgatgtacca
gaaaaattgtttgaatcatctatgcctggatttacaggtgacttggttct
gggaacttcccttaggacctctggagagtaacaagtacttgtaaatacca
agtcatctcttgagttcttaacattaagaataatgatgcataaaaatact
atgcaagctaccatggtaggaaagcgattaagcagtcctacccagctgta
acatgcatgaaccatgataattactagcatggcacaatatgcatcaaggt
gcaataagtggcacttacttaacagaatccaccaacagctgtctaattgg
acttaaggcccactcaaagcaggggaattattccaggtactctaaaacta
gccacctgaaccagagctaatgaggtcatagaacctagaaaatcttagct
agatcagcattattgcttaccacattataaatcccatacattctcaaata
taatggagcagaaagttaaatttggggagaatcatttgtgtatgtaaagg
caattttctctgtagtccatcttgctatactcaaactttattacatagtt
gatattaagaaaacttcattttacttggtttcctgacatgtatcatacaa
tgatagcacagtctagatgtactgaaaaaaatagtctagataaaatagac
tgtctgtatagttagaatcgatctacagaatgaatcctta

gaattcctctgactggagtagagacataccctttgtactcacctttaatc
tataacaatgaaggtaaaattagtttgtagaaggaatcagccatatttga
agttgaaatctaattgagggccagacaaagtgatgaatcacagaaagttt
tgacagaatgagtcagagatagaatactccctactctctcaaaaacagca
aaggaaagataatctatttaggagcagtgcaaggagaaagagtcaatctc
ttgagagtcaactcaatgaatgaaatgtagtggagctgggtttacttgag
agttcatgcagtttatttcaggtcgagagaggcaatggaagctagagaat
aagaaggaaatagaatattagaacaaattgacaaagttagttttcagcca
ggcagagcaattcaatcagaaactgagagaggccagattaaatcagtcag
cttggagggacatttgaaccagaacagctcagttaaagcagtcagccaga
tttcagaaagagctggaaagggtgagattattcaacagtaagcctctgat
atgacaattacatctggtgaataaaacatagttttacaggatttaaacct
gtttgaaaatatgtcataagtaaaagttttgatattatgtctaaaaaagg
taccgtttgaaaaattcaataataatggggactatttcaaaggatttttc
acatctattttcaaagtattttattttgtccccctttctgcttccctaca
catttgtgtttaatattcataagggaccctctaaaatgtgccagagacct
gggaggtgagagattctcagtactcaaagggagagatcttggatgaaatg
cccaacagtagaaagagggaacttgtagagacctcttctagtagaaagac
agaacatcaagtggagggatggggttgccatcttacagtcaaaatttctg
acccaggaattgtttctatctgaaagaactgcagagacaaaaaatttttt
attatcaatctaggccggctgggggcagggtccttgggtctggaaagcga
agcttgtagctgatagacaggcattaaaactatccaacaaaggtctttat
acactctgtaatttcaggagtctaggaggatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150562321_150563477
seq2: B6Ng01-276B20.b_47_1186 (reverse)

seq1  TAAGAATTCATTCTGTTAGATCTGAATCCTAACTAATACAGACCAGGTCT  50
      |||| |||||||||| ||||||   || |||||| ||||||||   ||||
seq2  TAAGGATTCATTCTG-TAGATC--GATTCTAACT-ATACAGAC--AGTCT  44

seq1  TATTTTTATCTAGAACTATTTTTTTTCAGTACAATCTAGGACTGTGCTTA  100
         |||||||||| |||| ||||||||||||| ||||| |||||||||  
seq2  --ATTTTATCTAG-ACTA-TTTTTTTCAGTAC-ATCTA-GACTGTGCT--  86

seq1  TTCATTGTATGAATAACAATGTCAGGAAACCAAGTAAAATGAAGTTTTCT  150
       |||||||||| |||   ||||||||||||||||||||||||||||||||
seq2  ATCATTGTATG-ATA--CATGTCAGGAAACCAAGTAAAATGAAGTTTTCT  133

seq1  TAATATCAACTATGTAATAAAGTTTGAGTATAGCAAGATGGACTACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCAACTATGTAATAAAGTTTGAGTATAGCAAGATGGACTACAGAG  183

seq1  AAAATTGCCTTTACATACACAAATGATTCTCCCCAAATTTAACTTTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCCTTTACATACACAAATGATTCTCCCCAAATTTAACTTTCTGC  233

seq1  TCCATTATATTTGAGAATGTATGGGATTTATAATGTGGTAAGCAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATATTTGAGAATGTATGGGATTTATAATGTGGTAAGCAATAATG  283

seq1  CTGATCTAGCTAAGATTTTCTAGGTTCTATGACCTCATTAGCTCTGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTAGCTAAGATTTTCTAGGTTCTATGACCTCATTAGCTCTGGTTC  333

seq1  AGGTGGCTAGTTTTAGAGTACCTGGAATAATTCCCCTGCTTTGAGTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCTAGTTTTAGAGTACCTGGAATAATTCCCCTGCTTTGAGTGGGC  383

seq1  CTTAAGTCCAATTAGACAGCTGTTGGTGGATTCTGTTAAGTAAGTGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTCCAATTAGACAGCTGTTGGTGGATTCTGTTAAGTAAGTGCCAC  433

seq1  TTATTGCACCTTGATGCATATTGTGCCATGCTAGTAATTATCATGGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCACCTTGATGCATATTGTGCCATGCTAGTAATTATCATGGTTCA  483

seq1  TGCATGTTACAGCTGGGTAGGACTGCTTAATCGCTTTCCTACCATGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTACAGCTGGGTAGGACTGCTTAATCGCTTTCCTACCATGGTAG  533

seq1  CTTGCATAGTATTTTTATGCATCATTATTCTTAATGTTAAGAACTCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATAGTATTTTTATGCATCATTATTCTTAATGTTAAGAACTCAAGA  583

seq1  GATGACTTGGTATTTACAAGTACTTGTTACTCTCCAGAGGTCCTAAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTTGGTATTTACAAGTACTTGTTACTCTCCAGAGGTCCTAAGGGA  633

seq1  AGTTCCCAGAACCAAGTCACCTGTAAATCCAGGCATAGATGATTCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAGAACCAAGTCACCTGTAAATCCAGGCATAGATGATTCAAACA  683

seq1  ATTTTTCTGGTACATCAAATATACACAAACTCTTCACAGATAAACAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGGTACATCAAATATACACAAACTCTTCACAGATAAACAGACA  733

seq1  GAAAAACACAATAAAATAAACATAAATATAAATAAAATATTAGTTATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACACAATAAAATAAACATAAATATAAATAAAATATTAGTTATGCT  783

seq1  ATACATTGAAGAATAATATCTAATTATTGAGCATCTTTGTGATGTTTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGAAGAATAATATCTAATTATTGAGCATCTTTGTGATGTTTGTC  833

seq1  AAAGGTGACTTTTGGATTAATAAATATTAATACATATATTAAAAATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGACTTTTGGATTAATAAATATTAATACATATATTAAAAATTAAA  883

seq1  ATTTACTCAAAGTCCTCTGAATGAAATGTTTTTTTTAGATAATTCTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCAAAGTCCTCTGAATGAAATGTTTTTTTTAGATAATTCTCTCT  933

seq1  CTGATTCTGCCATTCACAGCAAACATATTTCATCTCACAAGCTCTACCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCTGCCATTCACAGCAAACATATTTCATCTCACAAGCTCTACCTC  983

seq1  ACAACTGCTGTTCTTGGTGGACACCCAACTTTCAGATACCTCCAATTTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCTGTTCTTGGTGGACACCCAACTTTCAGATACCTCCAATTTCT  1033

seq1  GGGGTCATTGCTGCAACTTAGGCTTCTTCTCTTTACCCCTGCCCTCTTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCATTGCTGCAACTTAGGCTTCTTCTCTTTACCCCTGCCCTCTTCT  1083

seq1  GACCTGTCCTCAGGTATCAGAACATAGTTCAGGAATGCATTCCTGTAAGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTCCTCAGGTATCAGAACATAGTTCAGGAATGCATTCCTGTAAGG  1133

seq1  AGAATTC  1157
      |||||||
seq2  AGAATTC  1140


seq1: chr1_150443621_150444671
seq2: B6Ng01-276B20.g_154_1198

seq1  GCCATATTTGAAGTTGAAATCTAATTGAGGGCCAGACAAAGTGATGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATTTGAAGTTGAAATCTAATTGAGGGCCAGACAAAGTGATGAATC  50

seq1  ACAGAAAGTTTTGACAGAATGAGTCAGAGATAGAATACTCCCTACTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTTTTGACAGAATGAGTCAGAGATAGAATACTCCCTACTCTCT  100

seq1  CAAAAACAGCAAAGGAAAGATAATCTATTTAGGAGCAGTGCAAGGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAGCAAAGGAAAGATAATCTATTTAGGAGCAGTGCAAGGAGAAA  150

seq1  GAGTCAATCTCTTGAGAGTCAACTCAATGAATGAAATGTAGTGGAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAATCTCTTGAGAGTCAACTCAATGAATGAAATGTAGTGGAGCTGG  200

seq1  GTTTACTTGAGAGTTCATGCAGTTTATTTCAGGTCGAGAGAGGCAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTGAGAGTTCATGCAGTTTATTTCAGGTCGAGAGAGGCAATGGA  250

seq1  AGCTAGAGAATAAGAAGGAAATAGAATATTAGAACAAATTGACAAAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGAATAAGAAGGAAATAGAATATTAGAACAAATTGACAAAGTTA  300

seq1  GTTTTCAGCCAGGCAGAGCAATTCAATCAGAAACTGAGAGAGGCCAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCCAGGCAGAGCAATTCAATCAGAAACTGAGAGAGGCCAGATT  350

seq1  AAATCAGTCAGCTTGGAGGGACATTTGAACCAGAACAGCTCAGTTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTCAGCTTGGAGGGACATTTGAACCAGAACAGCTCAGTTAAAGC  400

seq1  AGTCAGCCAGATTTCAGAAAGAGCTGGAAAGGGTGAGATTATTCAACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCAGATTTCAGAAAGAGCTGGAAAGGGTGAGATTATTCAACAGT  450

seq1  AAGCCTCTGATATGACAATTACATCTGGTGAATAAAACATAGTTTTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTGATATGACAATTACATCTGGTGAATAAAACATAGTTTTACAG  500

seq1  GATTTAAACCTGTTTGAAAATATGTCATAAGTAAAAGTTTTGATATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAACCTGTTTGAAAATATGTCATAAGTAAAAGTTTTGATATTATG  550

seq1  TCTAAAAAAGGTACCGTTTGAAAAATTCAATAATAATGGGGACTATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAAAGGTACCGTTTGAAAAATTCAATAATAATGGGGACTATTTCA  600

seq1  AAGGATTTTTCACATCTATTTTCAAAGTATTTTATTTTGTCCCCCTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTTTCACATCTATTTTCAAAGTATTTTATTTTGTCCCCCTTTCT  650

seq1  GCTTCCCTACACATTTGTGTTTAATATTCATAAGGGACCCTCTAAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTACACATTTGTGTTTAATATTCATAAGGGACCCTCTAAAATGT  700

seq1  GCCAGAGACCTGGGAGGTGAGAGATTCTCAGTACTCAAAGGGAGAGATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGACCTGGGAGGTGAGAGATTCTCAGTACTCAAAGGGAGAGATCT  750

seq1  TGGATGAAATGCCCAACAGTAGAAAGAGGGAACTTGTAGAGACCTCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAATGCCCAACAGTAGAAAGAGGGAACTTGTAGAGACCTCTTCT  800

seq1  AGTAGAAAGACAGAACATCAAGTGGAGGGATGGGGTTGCCATCTTACAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAAGACAGAACATCAAGTGGAGGGATGGGGTTGCCATCTTACAGT  850

seq1  CAAAATTTCTGACCCA-GAATTGTTTCTATCTGAAAGAACTGCAGAGACA  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAAATTTCTGACCCAGGAATTGTTTCTATCTGAAAGAACTGCAGAGACA  900

seq1  AAAA--TTTTTATTATCAATCTAGGCCGGCTGGGGGCAGGGGCCCTTGGG  947
      ||||  |||||||||||||||||||||||||||||||| ||| |||||||
seq2  AAAAATTTTTTATTATCAATCTAGGCCGGCTGGGGGCA-GGGTCCTTGGG  949

seq1  TCTGG-AAGCGAAGCTTTGGTAGCTGGATTAAGACAAGGCATTAAAACCT  996
      ||||| |||||||||||  |||||| |||  |||| ||||||||||| ||
seq2  TCTGGAAAGCGAAGCTT--GTAGCT-GAT--AGAC-AGGCATTAAAA-CT  992

seq1  ATTCCCAACAAAAGTCTTTATACATGTCTGT-ATTTTAGGAGTCTAGGAG  1045
      ||  |||||||| |||||||||||  ||||| |||| |||||||||||||
seq2  AT--CCAACAAAGGTCTTTATACA-CTCTGTAATTTCAGGAGTCTAGGAG  1039

seq1  GATATT  1051
      ||||||
seq2  GATATT  1045


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