BAC Information

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BAC

Clone NameB6Ng01-277B05
Chromosome1 (Build37)
Map Location 118,068,283 - 118,069,366
singlet/doubletsinglet
Overlap geneCntnap5a
Upstream geneLOC227506
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277B05.bB6Ng01-277B05.g
ACCGA077690GA077691
length1,0821,178
definitionB6Ng01-277B05.b B6Ng01-277B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcctttgccttatttgtttgcttctatgatttttagttattt
attggtctgtattgacatgccacattataacattttcataatttatggag
gtatttttattatgtgtaccccattgtcctcttttgtgactctgagtcct
gctggtcttatatttttttcccaaatacccctaccctttgtcttcttttt
cagtggaccaaaagtttaatgggaattacttatagaaacatgtgtgaggg
gttactaacatgagcatgagcaacttaccagtgagttcaccactgaaaat
cattgtctcttcccttctcctatcactgttaactgcctagaatctccttg
cagctccatgatggaatactggtgggttcagtcttggacacttcttgttt
agtttgacatggttgttttgctattcatctctcacatccatgactacctg
catatttttgatgtattaaagctactaaatcattcattcatcagctttaa
tctactttgtgttatttatttgactacagtctaaaatcaagaggtacctg
tccctgttcatacagtttataagaggatcatgcagaagaagtgggcttaa
agagtgagggatagatgaggacaatggaggaaccagaaaggtagagtgta
aatgtggcagggaaaagatgtgtcttatcagtcgtttcagtgctcttcat
aggaatctgaatgtactaatgtaaattcatagggatttcatgttgagatg
gatattgggaaataagagacaaatttcaattgcctcaaaaaggaatgcac
ttgtaagacaagcaagatgcttcattctctggctccataatacaccttag
agaaatgggcactggagtcattacacacttcctttcttagctggatcaga
cagcatgtgtctgtaatctcataattgaggcagaagtaggaagattttga
gtttgagggtggcctgggcagagttaaaccttgtctaaaaaccagggcta
gaatagagctgaggtggtgctacactagacttgctttgtatgtaacagta
tccagcttgatgccagctcacacattaagtag

gaattccactatactggttgcatagaacctgcacaggaccaagggcctct
cctaccattaatgaccaactaggacatcctctgctacctatgcagctaga
gacatgagtcccactatgtgttttcttttattggtggtttagtcccaggg
agctctgagggtactggttagttcataatgttgttcctcctatggggctg
caaactccttcagctccttgggtactgtctctacctccttcattggggac
cctgtgcttcatccaatggatggctgtgagcatccacttctgtatttatc
aggcactaaaagagcctctgaggagatagctatatcaggctcctgtcagc
aatctctcgttggcattcgcaatagtgtctgtgcttggtggttttctatg
ggatggatcccgaggtggggcagtctctggatgttcattccttcagtttc
tgctgtgaactgtgtctctgtaactccttccatggatattttgttcccca
ttctaagaaggattgaagtatccacactttgttctttctctttcttgagt
ttcatgtgttttgaaaattttatctggggtactctgatcttctgggctaa
tataaacttaccagtgagtgtatatcatgtgtgttcttttgtgattgggt
tgtctcaattaggatgttatcctccagctccatccatttatccaagagtt
tcacaaattcattgtttttaatagcttcatagatggtcacacatcttgtt
attggtattttttttcccttgtttctttgttcaccctggatagactgaga
tgactaataacactttgtgaggcattttaaatccctgtctgggatttaaa
atgtttgtgtgtgtttcttcactgttacatacatgggactcactggcctc
taagcttccagagtctcctgtttatatctgccactttttccatagcgttg
gtaggattatagaaactaactactacatccacattttgtattggttctgg
ggatccaaatcagccttacattttgtgcagtcagagttactaatcatctc
caaggacaatgctgtgtttataataaatttctaataatcacaatacattc
aataggtgctatttcgttactgtattcatttagttaaaggaggacctcat
tcctatctctgtaactatctgcttacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_118068283_118069366
seq2: B6Ng01-277B05.b_44_1125

seq1  GAATTCCTTCCTTTGCCTTATTTGTTTGCTTCTATGATTTTTAGTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTTGCCTTATTTGTTTGCTTCTATGATTTTTAGTTATTT  50

seq1  ATTGGTCTGTATTGACATGCCACATTATAACATTTTCATAATTTATGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTGTATTGACATGCCACATTATAACATTTTCATAATTTATGGAG  100

seq1  GTATTTTTATTATGTGTACCCCATTGTCCTCTTTTGTGACTCTGAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTATTATGTGTACCCCATTGTCCTCTTTTGTGACTCTGAGTCCT  150

seq1  GCTGGTCTTATATTTTTTTCCCAAATACCCCTACCCTTTGTCTTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCTTATATTTTTTTCCCAAATACCCCTACCCTTTGTCTTCTTTTT  200

seq1  CAGTGGACCAAAAGTTTAATGGGAATTACTTATAGAAACATGTGTGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGACCAAAAGTTTAATGGGAATTACTTATAGAAACATGTGTGAGGG  250

seq1  GTTACTAACATGAGCATGAGCAACTTACCAGTGAGTTCACCACTGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAACATGAGCATGAGCAACTTACCAGTGAGTTCACCACTGAAAAT  300

seq1  CATTGTCTCTTCCCTTCTCCTATCACTGTTAACTGCCTAGAATCTCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTCTTCCCTTCTCCTATCACTGTTAACTGCCTAGAATCTCCTTG  350

seq1  CAGCTCCATGATGGAATACTGGTGGGTTCAGTCTTGGACACTTCTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCATGATGGAATACTGGTGGGTTCAGTCTTGGACACTTCTTGTTT  400

seq1  AGTTTGACATGGTTGTTTTGCTATTCATCTCTCACATCCATGACTACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGACATGGTTGTTTTGCTATTCATCTCTCACATCCATGACTACCTG  450

seq1  CATATTTTTGATGTATTAAAGCTACTAAATCATTCATTCATCAGCTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGATGTATTAAAGCTACTAAATCATTCATTCATCAGCTTTAA  500

seq1  TCTACTTTGTGTTATTTATTTGACTACAGTCTAAAATCAAGAGGTACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTTGTGTTATTTATTTGACTACAGTCTAAAATCAAGAGGTACCTG  550

seq1  TCCCTGTTCATACAGTTTATAAGAGGATCATGCAGAAGAAGTGGGCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTCATACAGTTTATAAGAGGATCATGCAGAAGAAGTGGGCTTAA  600

seq1  AGAGTGAGGGATAGATGAGGACAATGGAGGAACCAGAAAGGTAGAGTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGGGATAGATGAGGACAATGGAGGAACCAGAAAGGTAGAGTGTA  650

seq1  AATGTGGCAGGGAAAAGATGTGTCTTATCAGTCGTTTCAGTGCTCTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCAGGGAAAAGATGTGTCTTATCAGTCGTTTCAGTGCTCTTCAT  700

seq1  AGGAATCTGAATGTACTAATGTAAATTCATAGGGATTTCATGTTGAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCTGAATGTACTAATGTAAATTCATAGGGATTTCATGTTGAGATG  750

seq1  GATATTGGGAAATAAGAGACAAATTTCAATTGCCTCAAAAAGGAATGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGGAAATAAGAGACAAATTTCAATTGCCTCAAAAAGGAATGCAC  800

seq1  TTGTAAGACAAGCAAGATGCTTCATTCTCTGGCTCCATAATACACCTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGACAAGCAAGATGCTTCATTCTCTGGCTCCATAATACACCTTAG  850

seq1  AGAAATGGGCACTGGAGTCATTACACACTTCC-TTCTTAGCTGGATCAGA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAAATGGGCACTGGAGTCATTACACACTTCCTTTCTTAGCTGGATCAGA  900

seq1  CAGCATGTGTCTGTAATCTCATAATTGAGGCAGAAGTAGGAAGATTTTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTGTCTGTAATCTCATAATTGAGGCAGAAGTAGGAAGATTTTGA  950

seq1  GTTTGAGGGTGGCCTGGGCAAGAGTTAAACCTTGTCTAAAAACCAAGGGC  999
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  GTTTGAGGGTGGCCTGGGC-AGAGTTAAACCTTGTCTAAAAACC-AGGGC  998

seq1  TAGAATAGAGCTGA-GTGGTGCTACACTAGACTTGCTTTGTATGT-ACAG  1047
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  TAGAATAGAGCTGAGGTGGTGCTACACTAGACTTGCTTTGTATGTAACAG  1048

seq1  TATCCCAGCTTTGATGCCCAGCCTCACACA-TAAGTAG  1084
      ||| ||||| |||||| |||| |||||||| |||||||
seq2  TAT-CCAGC-TTGATG-CCAG-CTCACACATTAAGTAG  1082


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