BAC Information

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BAC

Clone NameB6Ng01-278J19
Chromosome1 (Build37)
Map Location 150,891,251 - 151,003,276
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278J19.bB6Ng01-278J19.g
ACCGA078809GA078810
length1,0891,073
definitionB6Ng01-278J19.b B6Ng01-278J19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,002,261 - 151,003,276)(150,891,251 - 150,892,150)
sequence
gaattctcaacagaggaatctcaaatgttaaagaagcatttaaagaaatg
ttcaccttccttaatcaccaggaaagtacaaattaaaacaattctgagac
accaatcagaatgattaaaataaaaaaaaattaaaaactcaagtgacagc
atatgctggctaggatgtacagaaagcagaatactcctccattgctggtg
ggattgcaaactggtacaacctatctaataatcaatctggtggttcctca
gaaaattggaaatagttctaccagaagacccaagtataccactcctggac
atattcacaaagatgccccaccataccacaagggcatacttcactatgtt
catagcaaacttattcctaatagacagaaacaggaatcaacccagatgtc
tctcaactgaggaatagatatagaaaatgtggttcctttacacaatgaaa
taatattcagctataaaaaaatcaaatacatcatacattttcgtaggcaa
atggatgaaatgagaaaatatcatcctgaatgagttaacccaaacagaaa
atggcattcatggtacaacttaagttatctttttttttcttttttttaac
tgaatattttcttcatttacatttcaaatgctatcccaaaagtcccctgt
accctctccgcctccgacccccccccacctgctcccctacccactcactc
ccacttcttggccctgtctttcccctgtactggggcacataaagtttgct
ggaccaaggatcctctcttcccaatgacggccaataggtcatcttctgca
acatatgcagctagagacacgagttctgggggtactgattagtttcatat
ttttgtttctgctataggattgcagacccctccagctcttgggtactttc
tctaactccctacattggggggccctgtgttccatcctatagatgattgt
gagcatccacttctgtatttgccaggcactgggcaagcctcacaggagac
agctatatcagtcctttcagcaaggtcttgctgcatatgcaatagtgtct
tgcattgtaagctgattatggatggaccaagctgaaggt

gaattctctttgaaaagtaatctttttatgtaacatttttgtctgtttaa
aagagaagcttatttgatcagggaataaaatctaccttacctgtgggaat
aaaaataagaatttagattgctgttctgaattatgctagattagcaagtt
gctgctagtaggtcctcctctaagatctacaactttgctagatctgggga
gtgtctatgtttctagtaccaggcagtttccatctcccagacccccaaca
ccattgagcaagcccacatctaatcagacaacttttggttatcaccaaga
tgtgagcgcctctattgcaacacttaagtatatcttactctataggatat
ggttgtagttcatagatgacacaactggataggactattttttcatctct
cttttttgggagcttacatactgtcttgcagtactatataaactagtcct
tggggaggagctttcaggtcagatcctgtgtcctaagtgtatggtgtctt
cagcaatggatacttacatttcttgggaggcaactaatggcaataataat
agactatattgtttggggagtctcttggcctcttgggggaacaattgtca
gcccaagtaaaataacttcatttaaataatatgtgcattcacatatgttt
tcatataatatgtataattttacataataaaacaaattagtttcttcttt
atggcttttttaaatgttcactggttttatatgttccacccctctcctta
aatattgaactctgactttggtcattgttctgctgctttgtagggacacc
atgaacaagaacacatttaaaaaagaaagcattgaattagagtcttgctt
tatggtttcagaagtttaagtcccattgtcatggtgggagcatgactctg
cggcagtagctgataggtatgttgtcatccgctgaacagagacaatttct
ttcatttgaattcagagggctctggtacgttgcctggatcatgatttacc
aggaatagaagtgattaactaactctctgctattattcacacttccccct
ctacccatttccaccgtttagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151002261_151003276
seq2: B6Ng01-278J19.b_123_1137 (reverse)

seq1  AACTTCAGCCTTGTCCATCCCATAATCAGCTACCAAATGC-AGACACTAT  49
      | ||||||| | |||||| ||||||||||||  | ||||| |||||||||
seq2  ACCTTCAGCTTGGTCCAT-CCATAATCAGCTTAC-AATGCAAGACACTAT  48

seq1  TGCATATGCCAGCAAGACTTTGCTGAAAGGACCCTGATATAGCTGTCTCC  99
      |||||||| ||||||||| ||||||||||||  |||||||||||||||||
seq2  TGCATATG-CAGCAAGACCTTGCTGAAAGGA--CTGATATAGCTGTCTCC  95

seq1  TGTGAGGCTTTGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAATC  149
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCTTGCCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAATC  145

seq1  ATCTATAGGATGGAACACAGGG-CCCCCAATGTA-GGAGTTAGAGAAAGT  197
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  ATCTATAGGATGGAACACAGGGCCCCCCAATGTAGGGAGTTAGAGAAAGT  195

seq1  ACCCAAGAGCTGGAGGGGTCTGCAATCCTATAGCAGAAACAAAAATATG-  246
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACCCAAGAGCTGGAGGGGTCTGCAATCCTATAGCAGAAACAAAAATATGA  245

seq1  AACTAATCAGTACCCCCAGAACTCGTGTCTCTAGCTGCATATGTTGCAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATCAGTACCCCCAGAACTCGTGTCTCTAGCTGCATATGTTGCAGA  295

seq1  AGATGACCTATTGGCCGTCATTGGGAAGAGAGGATCCTTGGTCCAGCAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACCTATTGGCCGTCATTGGGAAGAGAGGATCCTTGGTCCAGCAAA  345

seq1  CTTTATGTGCCCCAGTACAGGGGAAAGACAGGGCCAAGAAGTGGGAGTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTGCCCCAGTACAGGGGAAAGACAGGGCCAAGAAGTGGGAGTGA  395

seq1  GTGGGTAGGGGAGCAGGTGGGGGGGGGTCGGAGGCGGAGAGGGTACAGGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGGGAGCAGGTGGGGGGGGGTCGGAGGCGGAGAGGGTACAGGG  445

seq1  GACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATATTCAGTTAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATATTCAGTTAAA  495

seq1  AAAAAGAAAAAAAAAGATAACTTAAGTTGTACCATGAATGCCATTTTCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAAAAAGATAACTTAAGTTGTACCATGAATGCCATTTTCTG  545

seq1  TTTGGGTTAACTCATTCAGGATGATATTTTCTCATTTCATCCATTTGCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTAACTCATTCAGGATGATATTTTCTCATTTCATCCATTTGCCT  595

seq1  ACGAAAATGTATGATGTATTTGATTTTTTTATAGCTGAATATTATTTCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAATGTATGATGTATTTGATTTTTTTATAGCTGAATATTATTTCAT  645

seq1  TGTGTAAAGGAACCACATTTTCTATATCTATTCCTCAGTTGAGAGACATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAAGGAACCACATTTTCTATATCTATTCCTCAGTTGAGAGACATC  695

seq1  TGGGTTGATTCCTGTTTCTGTCTATTAGGAATAAGTTTGCTATGAACATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGATTCCTGTTTCTGTCTATTAGGAATAAGTTTGCTATGAACATA  745

seq1  GTGAAGTATGCCCTTGTGGTATGGTGGGGCATCTTTGTGAATATGTCCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTATGCCCTTGTGGTATGGTGGGGCATCTTTGTGAATATGTCCAG  795

seq1  GAGTGGTATACTTGGGTCTTCTGGTAGAACTATTTCCAATTTTCTGAGGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTATACTTGGGTCTTCTGGTAGAACTATTTCCAATTTTCTGAGGA  845

seq1  ACCACCAGATTGATTATTAGATAGGTTGTACCAGTTTGCAATCCCACCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGATTGATTATTAGATAGGTTGTACCAGTTTGCAATCCCACCAG  895

seq1  CAATGGAGGAGTATTCTGCTTTCTGTACATCCTAGCCAGCATATGCTGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGGAGTATTCTGCTTTCTGTACATCCTAGCCAGCATATGCTGTC  945

seq1  ACTTGAGTTTTTAATTTTTTTTTATTTTAATCATTCTGATTGGTGTCTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTTTTTAATTTTTTTTTATTTTAATCATTCTGATTGGTGTCTCA  995

seq1  GAATTGTTTTAATTTGTACT  1016
      ||||||||||||||||||||
seq2  GAATTGTTTTAATTTGTACT  1015


seq1: chr1_150891251_150892150
seq2: B6Ng01-278J19.g_240_1140

seq1  AGATCTACAACTTTGCTAGATCTGGGGAGTGTCTATGTTTCTAGTACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACAACTTTGCTAGATCTGGGGAGTGTCTATGTTTCTAGTACCAG  50

seq1  GCAGTTTCCATCTCCCAGACCCCCAACACCATTGAGCAAGCCCACATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCCATCTCCCAGACCCCCAACACCATTGAGCAAGCCCACATCTA  100

seq1  ATCAGACAACTTTTGGTTATCACCAAGATGTGAGCGCCTCTATTGCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACAACTTTTGGTTATCACCAAGATGTGAGCGCCTCTATTGCAACA  150

seq1  CTTAAGTATATCTTACTCTATAGGATATGGTTGTAGTTCATAGATGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTATATCTTACTCTATAGGATATGGTTGTAGTTCATAGATGACAC  200

seq1  AACTGGATAGGACTATTTTTTCATCTCTCTTTTTTGGGAGCTTACATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATAGGACTATTTTTTCATCTCTCTTTTTTGGGAGCTTACATACT  250

seq1  GTCTTGCAGTACTATATAAACTAGTCCTTGGGGAGGAGCTTTCAGGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCAGTACTATATAAACTAGTCCTTGGGGAGGAGCTTTCAGGTCAG  300

seq1  ATCCTGTGTCCTAAGTGTATGGTGTCTTCAGCAATGGATACTTACATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGTCCTAAGTGTATGGTGTCTTCAGCAATGGATACTTACATTTC  350

seq1  TTGGGAGGCAACTAATGGCAATAATAATAGACTATATTGTTTGGGGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCAACTAATGGCAATAATAATAGACTATATTGTTTGGGGAGTC  400

seq1  TCTTGGCCTCTTGGGGGAACAATTGTCAGCCCAAGTAAAATAACTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCCTCTTGGGGGAACAATTGTCAGCCCAAGTAAAATAACTTCATT  450

seq1  TAAATAATATGTGCATTCACATATGTTTTCATATAATATGTATAATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATATGTGCATTCACATATGTTTTCATATAATATGTATAATTTTA  500

seq1  CATAATAAAACAAATTAGTTTCTTCTTTATGGC-TTTTTAAATGTTCACT  549
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATAATAAAACAAATTAGTTTCTTCTTTATGGCTTTTTTAAATGTTCACT  550

seq1  GGTTTTATATGTTCCACCCCTCTCCTTAAATATTGAACTCTGAC-TTGGT  598
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTTTTATATGTTCCACCCCTCTCCTTAAATATTGAACTCTGACTTTGGT  600

seq1  CATTGTTCTGCTGCTTTGTAGGGACACCATGAACAAGAACACATTTAAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTCTGCTGCTTTGTAGGGACACCATGAACAAGAACACATTTAAAA  650

seq1  AAGAAAGCATTGAATTAGAGTCTTGC-TTATGGTTTCAGAAGTTT-AGT-  695
      |||||||||||||||||||||||||| |||||||||||||||||| ||| 
seq2  AAGAAAGCATTGAATTAGAGTCTTGCTTTATGGTTTCAGAAGTTTAAGTC  700

seq1  CCATTGTCATGGTGGGAGCATGACTCTGCGGCAGTAGCTGATAGGTATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCATGGTGGGAGCATGACTCTGCGGCAGTAGCTGATAGGTATGT  750

seq1  TGTCATCCGCTGACAAGAGACAAATTCTTTCATTTGGAATTCAGAGGGCT  795
      |||||||||||||  |||||||| ||||||||||| ||||||||||||||
seq2  TGTCATCCGCTGAACAGAGACAATTTCTTTCATTT-GAATTCAGAGGGCT  799

seq1  CTGGTACGTGGCTGGAATCATGATTTACCAGGAATAGAAAGTGGATTAAC  845
      ||||||||| ||  | ||||||||||||||||||||| |||| |||||||
seq2  CTGGTACGTTGCCTGGATCATGATTTACCAGGAATAG-AAGT-GATTAAC  847

seq1  TAACTCTCTGCTA-TATTCACACCTCCCCCTCTACCCAATTTCACACGTT  894
      ||||||||||||| ||||||||| ||||||||||||| ||||| |||  |
seq2  TAACTCTCTGCTATTATTCACACTTCCCCCTCTACCC-ATTTC-CACCGT  895

seq1  TTAGCA  900
      ||||||
seq2  TTAGCA  901


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