BAC Information

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BAC

Clone NameB6Ng01-282K23
Chromosome1 (Build37)
Map Location 114,967,744 - 114,968,900
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626897, LOC666615, LOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282K23.bB6Ng01-282K23.g
ACCGA081838GA081839
length1,1621,182
definitionB6Ng01-282K23.b B6Ng01-282K23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattatggggaagagataatatatggctgaacttaattcttctt
gactctccagctctagaaacaccatagaaaagggagtgggaagataaaaa
gagccagaggtcaggaaaaatcagagggaaacagcatcttctggacatga
aaggccagattcattctaaaagggctctctaacaggcccaaaattatgaa
cgtagatccagcagctcttacccacacttcttcaacctccctcactaaac
cattagattatgttcctagagttacccaccatgggctatgcccttatttg
gctaagtccatatgcttgtctaaaactccaaggttcagctattaaaacac
aaaaggtcagcaatcaaaagaaataaataaaaagccaaataaatttatgt
ataaaattcttaaagaataaatgaaaaaaacttcctttcatagcactcag
tttccatgagaaatactgataatgtaactgcctttgtaatacatgctcca
gcaaacatagaggtttaccaatgtagacttggaaggaaacatttctttag
ctttgagtcctattgtatatttataggcatgtctttatatctttcctgga
aaagtaatagtacaatttgcatttgaacataacttcaatagtacaaatag
gtgccttggagcagttgaatgtcccctgctatgagtgataaaccatgcaa
ctacatgccacttgaatgtggagtggagcatctttgttgtaaatcaccat
acagttatatttcccccatatgctgtgatatcacgagtcttcatggtaat
tcagtggtccctattaaggatgatgagatatgtagttgatactatcatgt
ttgccaagagagaatttgtcttcgtaagagaaaactttcagcagaaatta
tatatgtgagtggcacgttgcgtgtttgtctctaatttgatagacaaagt
agataagagatgaaagtataaatatgcacagcataacttacccaagacag
ttattctccatgaagaaccctgtaatttctaggcagtaaccaaatgtaat
taattcaatgcatctccaaattcacccaacagggtggaaggggttaggtt
taaaatattagaatggcctaagtggaaaagaaatttatctttgtccaaat
gcagaacaataa
gaattctcctctgaggaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcgcag
agagatgcgcagagaggcagtgcgcagagaggcagtgcgcagagaggcag
tgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaag
gaaaatacaacaggcatttccagtctttgaaggagccgagggtgggcgtg
tccacgctccggtagaatacttacaaattaaagaactcgccgagtcggtc
cgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggct
cgctggcatggcactaactcctgctgactggcaaacgattgtaaaagccg
ctctccctagtatgggcaaatatatagaatggagagctctttggcatgaa
actgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagca
gagagattggacttttgacttgttaacgggtcagggagcttattctgctg
atcaaacaaactaccattggggagcttatgcccagatttcttccacggct
attagggcctggaaggcgctctcccgagcaggtgaaaccactggtcaatt
aacaaaagttgtccagggacctcaggaatccttctcagattttgtggcca
gaatgacagaggcagcagagcgtatttttggagattcagagcaagccgcg
cctctggtagaacagctaatctatgagcaagccacaaagagtgccgagcg
gccatagccccaagaaagaacaaagcttacagactggctcaggtctgtcg
agagcttgggggacctctcaccaaatgcagcttagcgcgccattctcatt
ctcagaaacggctccatggacagaatgatcagagaccatttttttatgcc
gcaagcctggacatttaggaagatgctggcttcagaataacacgcaaggc
aacctctctaccctcgttgctctctctaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114967744_114968900
seq2: B6Ng01-282K23.b_45_1206 (reverse)

seq1  TTATTGTCTTCCATTGGGAC-AAGATAA--TTCTTTTCCACTTATGCCAT  47
      |||||||  | |||| |||| |||||||  |||||||||||||| |||||
seq2  TTATTGTTCTGCATTTGGACAAAGATAAATTTCTTTTCCACTTAGGCCAT  50

seq1  TCT-ATA-TTTATACCTACCCCTTTCTTCCCTGT--GGTGATTTTGGAGA  93
      ||| ||| |||| ||||| ||| |||  ||||||  ||||| ||||||||
seq2  TCTAATATTTTAAACCTAACCCCTTCCACCCTGTTGGGTGAATTTGGAGA  100

seq1  TGCCATGAATTAAATTACATTTGGTTACTGCCTAGAAATTACA-GGTTCT  142
      |||  |||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TGCATTGAATT-AATTACATTTGGTTACTGCCTAGAAATTACAGGGTTCT  149

seq1  TCATGGAGAATAACTGTCTTGGGTAAGTTATTGCTGTGCATATTTATACT  192
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCATGGAGAATAACTGTCTTGGGTAAGTTA-TGCTGTGCATATTTATACT  198

seq1  TTCATCCTCTTATCTACTTTGTCTATCAAATTAGAGACAAACACGCAACG  242
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAT-CTCTTATCTACTTTGTCTATCAAATTAGAGACAAACACGCAACG  247

seq1  TGCCACTCACATATATAATTTCTGCTGAAAGTTTTCTCTTACGAAGACAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTCACATATATAATTTCTGCTGAAAGTTTTCTCTTACGAAGACAA  297

seq1  ATTCTCTCTTGGCAAACATGATAGTATCAACTACATATCTCATCATCCTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTTGGCAAACATGATAGTATCAACTACATATCTCATCATCCTT  347

seq1  AATAGGGACCACTGAATTACCATGAAGACTCGTGATATCACAGCATATGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGACCACTGAATTACCATGAAGACTCGTGATATCACAGCATATGG  397

seq1  GGGAAATATAACTGTATGGTGATTTACAACAAAGATGCTCCACTCCACAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATATAACTGTATGGTGATTTACAACAAAGATGCTCCACTCCACAT  447

seq1  TCAAGTGGCATGTAGTTGCATGGTTTATCACTCATAGCAGGGGACATTCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGGCATGTAGTTGCATGGTTTATCACTCATAGCAGGGGACATTCA  497

seq1  ACTGCTCCAAGGCACCTATTTGTACTATTGAAGTTATGTTCAAATGCAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCCAAGGCACCTATTTGTACTATTGAAGTTATGTTCAAATGCAAA  547

seq1  TTGTACTATTACTTTTCCAGGAAAGATATAAAGACATGCCTATAAATATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTATTACTTTTCCAGGAAAGATATAAAGACATGCCTATAAATATA  597

seq1  CAATAGGACTCAAAGCTAAAGAAATGTTTCCTTCCAAGTCTACATTGGTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGACTCAAAGCTAAAGAAATGTTTCCTTCCAAGTCTACATTGGTA  647

seq1  AACCTCTATGTTTGCTGGAGCATGTATTACAAAGGCAGTTACATTATCAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTATGTTTGCTGGAGCATGTATTACAAAGGCAGTTACATTATCAG  697

seq1  TATTTCTCATGGAAACTGAGTGCTATGAAAGGAAGTTTTTTTCATTTATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCATGGAAACTGAGTGCTATGAAAGGAAGTTTTTTTCATTTATT  747

seq1  CTTTAAGAATTTTATACATAAATTTATTTGGCTTTTTATTTATTTCTTTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAATTTTATACATAAATTTATTTGGCTTTTTATTTATTTCTTTT  797

seq1  GATTGCTGACCTTTTGTGTTTTAATAGCTGAACCTTGGAGTTTTAGACAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTGACCTTTTGTGTTTTAATAGCTGAACCTTGGAGTTTTAGACAA  847

seq1  GCATATGGACTTAGCCAAATAAGGGCATAGCCCATGGTGGGTAACTCTAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGACTTAGCCAAATAAGGGCATAGCCCATGGTGGGTAACTCTAG  897

seq1  GAACATAATCTAATGGTTTAGTGAGGGAGGTTGAAGAAGTGTGGGTAAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAATCTAATGGTTTAGTGAGGGAGGTTGAAGAAGTGTGGGTAAGA  947

seq1  GCTGCTGGATCTACGTTCATAATTTTGGGCCTGTTAGAGAGCCCTTTTAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGGATCTACGTTCATAATTTTGGGCCTGTTAGAGAGCCCTTTTAG  997

seq1  AATGAATCTGGCCTTTCATGTCCAGAAGATGCTGTTTCCCTCTGATTTTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATCTGGCCTTTCATGTCCAGAAGATGCTGTTTCCCTCTGATTTTT  1047

seq1  CCTGACCTCTGGCTCTTTTTATCTTCCCACTCCCTTTTCTATGGTGTTTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTCTGGCTCTTTTTATCTTCCCACTCCCTTTTCTATGGTGTTTC  1097

seq1  TAGAGCTGGAGAGTCAAGAAGAATTAAGTTCAGCCATATATTATCTCTTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGGAGAGTCAAGAAGAATTAAGTTCAGCCATATATTATCTCTTC  1147

seq1  CCCATAATAGAATTC  1157
      |||||||||||||||
seq2  CCCATAATAGAATTC  1162