BAC Information

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BAC

Clone NameB6Ng01-283D01
Chromosome1 (Build37)
Map Location 80,547,114 - 80,548,268
singlet/doubletsinglet
Overlap geneDock10
Upstream geneAp1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik
Downstream geneLOC665092, 9430031J16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283D01.bB6Ng01-283D01.g
ACCGA082213GA082214
length1,2011,142
definitionB6Ng01-283D01.b B6Ng01-283D01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagctgtgatttcactgagatatgttcataaaagacatagtaagt
atcagaaagcagaagttgcaaaagcatggaaaaaaatcaaaatgcataaa
acctcatgtattgcttgttttaatccttcttaaaaatgtaagagcagggg
ttggtgagatggctcagcattggcttgtcttccagagaacctggctttct
agcaccaaaataatggctcacacccacctttaactccagttccagggaat
ctgacatcttcttctggcaggcaaatacagtagatatgcaacaagacctt
tgtatacataaaataggtaaataaaatacaaaaaatagacaattcttaaa
agttttgaaaggagagttacaagagactagtctacccaggtgagagtgca
gactacagaagcaacacggcttctgggacataacccattttgggctccag
acatctgggcaccttccccaacagaggagatgtgtccacctggaagggct
ctttcagagaaggtgaggaagccatcttgggtccctggtccctcagagac
tagtctgcgcaggtgagagtatggactacagaagcaacacagcttctggg
acagacccagtttcaggctccagatatccgggcaccttccctgctaaagg
agaggtatctgccccagagggctctgcctgcaggaacaggtgagggagcc
atctgggtcccgggtccctcagagaccaatctgtgcaggtgagctggaat
actgcagaggctacacatcttctgggacaggccctgtatcagaccttcat
cttcagccagggggtatgtctgaacaacagacctctgtgtgtcttccctg
caagaggaaagcttgcctgcagagactactctgaccactgagagagctgg
actcccaggactgctgacagggactaacagaaatcacaggagggaacaag
ctccaagcagagacattataataacttaactccagagatttaccagatgg
caaaaggcaaatgtagatcttactacagaaccagaccacttcaccatcat
cagacctagcacctccccacctcagcccagtcttgtataccccaaaacac
ccaaaaagcaggactcgattcaaaatcatatcctcatgatgcctggctag
agaaccttcagaacgctttattaccctccacttttaaaggagtataccca
g
gaattctatttctggcaacaacattcaataatgtagaaaactgccatttc
aaacaagaagagtatttgatgtgttcttttgtatttgagcaagtatataa
ttaaattgcacacacgtattaattattcttcactgaggatatactaattg
atcttcagaaaatatataggcctagtgcaattatacttaaatggagatta
ttcacacttcatgcatcataggtgtgcaaatggatagtctttaaagaaat
atttaaaggaccttatacagccaaggttatgtttacaatggagtttgcag
gtatgagtgcgtctgtgaaaaaaatgagaaagatctcaaataatagctta
atgtacaatttacggtctcagataaagaggaatttgcaaacctcaaaagg
aaggagtagttaccagaaataatgaaggtctagggaagaaattaatgaaa
taggaactaaaagaacaacataaagaatcaactgaagagttggttctttg
gaaagataaatatgactgacataccctatccaaactaattaggaaaaaaa
atccaaattaacaaaattagagataaaaggagtattgtaataaactacaa
tgaagtccagaagactgttagggaatatttaaaactataaccctgaacat
ctagaataaatgaatgttattaatgatatgttatctaataaaattaaatt
atgagaataaaaataacttgaatatccataggaatgagattaaaatagtt
ataagaagtctgtcagcaaagaaaagttccaaaccagatggtagagacct
tcttttatgactcatgaaatggatgctaggtcagtgtttcaggcagattc
acacagagcttaccttagttaccatgctgggttagaccaaccattactcc
cattctcggtccttacctttaaactcaccagaagagacatgctgatgtaa
ttgttcacatcttaaacacgaaatccccgggtccataaatgtaagcagcg
ctaggagatatatcccaagtcaatcgtttactgtgggacttagaaagacg
aattatatactgatcaggagtatagtcaactagtgttgcctatgtgttca
atattattttgaagtcctaaagcatgtggaaacacccatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80547114_80548268
seq2: B6Ng01-283D01.g_66_1207

seq1  GAATTCTATTTCTGGCAACAACATTCAATAATGTAGAAAACTGCCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTCTGGCAACAACATTCAATAATGTAGAAAACTGCCATTTC  50

seq1  AAACAAGAAGAGTATTTGATGTGTTCTTTTGTATTTGAGCAAGTATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAAGAGTATTTGATGTGTTCTTTTGTATTTGAGCAAGTATATAA  100

seq1  TTAAATTGCACACACGTATTAATTATTCTTCACTGAGGATATACTAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGCACACACGTATTAATTATTCTTCACTGAGGATATACTAATTG  150

seq1  ATCTTCAGAAAATATATAGGCCTAGTGCAATTATACTTAAATGGAGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGAAAATATATAGGCCTAGTGCAATTATACTTAAATGGAGATTA  200

seq1  TTCACACTTCATGCATCATAGGTGTGCAAATGGATAGTCTTTAAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTTCATGCATCATAGGTGTGCAAATGGATAGTCTTTAAAGAAAT  250

seq1  ATTTAAAGGACCTTATACAGCCAAGGTTATGTTTACAATGGAGTTTGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGACCTTATACAGCCAAGGTTATGTTTACAATGGAGTTTGCAG  300

seq1  GTATGAGTGCGTCTGTGAAAAAAATGAGAAAGATCTCAAATAATAGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTGCGTCTGTGAAAAAAATGAGAAAGATCTCAAATAATAGCTTA  350

seq1  ATGTACAATTTACGGTCTCAGATAAAGAGGAATTTGCAAACCTCAAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAATTTACGGTCTCAGATAAAGAGGAATTTGCAAACCTCAAAAGG  400

seq1  AAGGAGTAGTTACCAGAAATAATGAAGGTCTAGGGAAGAAATTAATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTAGTTACCAGAAATAATGAAGGTCTAGGGAAGAAATTAATGAAA  450

seq1  TAGGAACTAAAAGAACAACATAAAGAATCAACTGAAGAGTTGGTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTAAAAGAACAACATAAAGAATCAACTGAAGAGTTGGTTCTTTG  500

seq1  GAAAGATAAATATGACTGACATACCCTATCCAAACTAATTAGGAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAAATATGACTGACATACCCTATCCAAACTAATTAGGAAAAAAA  550

seq1  ATCCAAATTAACAAAATTAGAGATAAAAGGAGTATTGTAATAAACTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATTAACAAAATTAGAGATAAAAGGAGTATTGTAATAAACTACAA  600

seq1  TGAAGTCCAGAAGACTGTTAGGGAATATTTAAAACTATAACCCTGAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCAGAAGACTGTTAGGGAATATTTAAAACTATAACCCTGAACAT  650

seq1  CTAGAATAAATGAATGTTATTAATGATATGTTATCTAATAAAATTAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATAAATGAATGTTATTAATGATATGTTATCTAATAAAATTAAATT  700

seq1  ATGAGAATAAAAATAACTTGAATATCCATAGGAATGAGATTAAAATAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATAAAAATAACTTGAATATCCATAGGAATGAGATTAAAATAGTT  750

seq1  ATAAGAAGTCTGTCAGCAAAGAAAAGTTCCAAACCAGATGGTAGAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGTCTGTCAGCAAAGAAAAGTTCCAAACCAGATGGTAGAGACCT  800

seq1  TCTTTTATGACTCATGAAATGGATGCTAGGTCAGTGTTTCAGGCAGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATGACTCATGAAATGGATGCTAGGTCAGTGTTTCAGGCAGATTC  850

seq1  ACACAGAGCTTACCTTAGTTACCATGCTGGGTTAGACCAACCATTACTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGCTTACCTTAGTTACCATGCTGGGTTAGACCAACCATTACTCC  900

seq1  CATTCTCGGTCCTTACC-TTAAACTCACCAGAAGAGAACATGCTGATGTA  949
      ||||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  CATTCTCGGTCCTTACCTTTAAACTCACCAGAAGAG-ACATGCTGATGTA  949

seq1  ATTGTTCACCATCTTAAACACG-AATCCCC-GGTCCATAAATGTAAAGCA  997
      |||||||| ||||||||||||| ||||||| ||||||||||||| |||||
seq2  ATTGTTCA-CATCTTAAACACGAAATCCCCGGGTCCATAAATGT-AAGCA  997

seq1  GCGCTAGGAAGATATAATCCCAAAGTCAAATCGTTTTACTTGTGGGACTT  1047
      |||||||| |||||| ||||| ||||| ||||| ||||| ||||||||||
seq2  GCGCTAGG-AGATAT-ATCCC-AAGTC-AATCG-TTTAC-TGTGGGACTT  1041

seq1  TAGGAAAGACG-ATTATATACTGAATCA-GAGTAATAGTCAACTAAGTGT  1095
         |||||||| ||||||||||| |||| |||| |||||||||| |||||
seq2  --AGAAAGACGAATTATATACTG-ATCAGGAGT-ATAGTCAACT-AGTGT  1086

seq1  --GCTATGTGTTTCTATTTATTTATTTTTTAAATCTCTAAAGCATGTGAG  1143
         ||||||| ||| |  ||||   |||| || || ||||||||||||  
seq2  TGCCTATGTG-TTCAA--TATT--ATTTTGAAGTC-CTAAAGCATGTGGA  1130

seq1  AACACCCATCTG  1155
      ||||||||||||
seq2  AACACCCATCTG  1142