BAC Information

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BAC

Clone NameB6Ng01-283O11
Chromosome1 (Build37)
Map Location 96,539,364 - 96,540,494
singlet/doubletsinglet
Overlap genenone
Upstream geneBok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1, LOC666012, LOC666025
Downstream geneLOC100040685, LOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283O11.bB6Ng01-283O11.g
ACCGA082744GA082745
length1,1281,142
definitionB6Ng01-283O11.b B6Ng01-283O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggaggctttcttcagagagggtctactttatgccctccagaa
ctcattccacttcacatgaaaacacatattctttctgtttcaaagtcccc
cagatcttatatcataacagcaactgtccaaagggcaaaagtctcatagt
tcaaattgtttatctatggtccttagacagtttaagtttccaaggtcaaa
aatgtgagcatagattacctgattcttctatttagcttttggacaaaact
tataacccatgttgaggtgtggctctgtattacatgggaatgtactaagg
aatgattcattcccagactctttcagattactagaaggattcattttcaa
gaaatgctataactaaaatacctgcgttttaggaaagtctaggtgacaga
taacaatgatcagctgtggtgagccactaggggctataagtcttcagata
ataggcaagacctacatggagacatcaactacatagtcacaaaaaaaaaa
aaaaaaaagacttcttacaacaacctaagaaaaacctaggtgtcaatcct
cacttggatatctggtatatgattctagaaccagcctgttttgatggaaa
atgaaaagatacttgctatatgtaatcaaaatgggaaatttttatgacaa
tttttccttagacaaagaataagttaatatgtgtgaaatactttctaaga
accaacattataaaggacaatatttgacattttactaaatttcatagaaa
cctgtttaacctgaggatataattatttttgttaatgtcaataaagtgag
taattttcagtatattggtgaaaaggctatattaattcaagacacttcat
taagtcaacagactatgaattttccagatattacgattattactttgtca
gtatgacagcttcttcaacaaattttaatttgtagtgcttattatttcta
tatctttgaatctaaaaactgagttcccccagggaattagtgagaaaagg
cagtcgggatttgaccatatccagtatcatcaaaagcaattttttctagc
acatcttgtggcatgttttttttaaccctatttctttattatggtgagtt
tttatcctacactataatgcatttaatt

gaattctctttctattggtatgtgtttgtgatacacaaagaatgagggtt
ggtttttttggggggttctgatactatcctagagcatgactatcttagaa
aaggaccacatctaaggctgacttggtgcttcttcatataacaagtgtga
tggatagagttttctaattcttttttgattttgtgaagctttgtcttgct
ttaattttggtggtgtgatggctattcctggttatcaacttgactacatc
tagaatgaactacaatccagaaatggaggacatgtttttcattttctttt
ttttttttcttagactttgtaactttgtttaattacaggaatcttgttaa
atctacaggaaccacatagaaatttagaaaggtattcagttttcttatag
tatttaataatatctttataattttgttatcaataggaattacagtgact
ataaaaacatttcctccttttgagaatttaatatatgaataatgtattca
catcatttccacccctggcttttcccactcaattcttccctcaactccct
cttgaattcattacttcttctataattatcagagagagagagagagagac
agagagagagagagagacagagacagagacagagacagaaacagacagag
agagagagacagagacagagacagagacagagaggcagagagagacaaag
agagtccattgtatgttgttgcttgtacgtaaatgtgcttatagatggcc
acctgggattggtaaccaagcaagtgtcccaagaaaaaaaactgattctc
ctctcagcagccattgattatgtgtagctttttagtaaggagagaggctt
tgtgagatttcctgttttcactggcaaggcaatatttttgatccaggtca
tgagccatagtggccatgaaaagcttagtcccaagcaaggtataatacac
cattattccaggaagggatatgaagcagctgaacagagcagttcaaagct
agatgtggtgtacacactttatctgggcagacccttggatgaagcttact
aggtgacgagagaacactcactcttgttcatctgcttgcattatggcagc
cactcgtgactatcgtcaggaattcacttaactgagatcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_96539364_96540494
seq2: B6Ng01-283O11.b_45_1172

seq1  GAATTCTTGGAGGCTTTCTTCAGAGAGGGTCTACTTTATGCCCTCCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAGGCTTTCTTCAGAGAGGGTCTACTTTATGCCCTCCAGAA  50

seq1  CTCATTCCACTTCACATGAAAACACATATTCTTTCTGTTTCAAAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCCACTTCACATGAAAACACATATTCTTTCTGTTTCAAAGTCCCC  100

seq1  CAGATCTTATATCATAACAGCAACTGTCCAAAGGGCAAAAGTCTCATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTATATCATAACAGCAACTGTCCAAAGGGCAAAAGTCTCATAGT  150

seq1  TCAAATTGTTTATCTATGGTCCTTAGACAGTTTAAGTTTCCAAGGTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTGTTTATCTATGGTCCTTAGACAGTTTAAGTTTCCAAGGTCAAA  200

seq1  AATGTGAGCATAGATTACCTGATTCTTCTATTTAGCTTTTGGACAAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGCATAGATTACCTGATTCTTCTATTTAGCTTTTGGACAAAACT  250

seq1  TATAACCCATGTTGAGGTGTGGCTCTGTATTACATGGGAATGTACTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCCATGTTGAGGTGTGGCTCTGTATTACATGGGAATGTACTAAGG  300

seq1  AATGATTCATTCCCAGACTCTTTCAGATTACTAGAAGGATTCATTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTCATTCCCAGACTCTTTCAGATTACTAGAAGGATTCATTTTCAA  350

seq1  GAAATGCTATAACTAAAATACCTGCGTTTTAGGAAAGTCTAGGTGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTATAACTAAAATACCTGCGTTTTAGGAAAGTCTAGGTGACAGA  400

seq1  TAACAATGATCAGCTGTGGTGAGCCACTAGGGGCTATAAGTCTTCAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGATCAGCTGTGGTGAGCCACTAGGGGCTATAAGTCTTCAGATA  450

seq1  ATAGGCAAGACCTACATGGAGACATCAACTACATAGTCACAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAAGACCTACATGGAGACATCAACTACATAGTCACAAAAAAAAAA  500

seq1  AAAAAAAAGACTTCTTACAACAACCTAAGAAAAACCTAGGTGTCAATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGACTTCTTACAACAACCTAAGAAAAACCTAGGTGTCAATCCT  550

seq1  CACTTGGATATCTGGTATATGATTCTAGAACCAGCCTGTTTTGATGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGATATCTGGTATATGATTCTAGAACCAGCCTGTTTTGATGGAAA  600

seq1  ATGAAAAGATACTTGCTATATGTAATCAAAATGGGAAATTTTTATGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGATACTTGCTATATGTAATCAAAATGGGAAATTTTTATGACAA  650

seq1  TTTTTCCTTAGACAAAGAATAAGTTAATATGTGTGAAATACTTTCTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTAGACAAAGAATAAGTTAATATGTGTGAAATACTTTCTAAGA  700

seq1  ACCAACATTATAAAGGACAATATTTGACATTTTACTAAATTTCATAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACATTATAAAGGACAATATTTGACATTTTACTAAATTTCATAGAAA  750

seq1  CCTGTTTAACCTGAGGATATAATTATTTTTGTTAATGTCAATAAAGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTAACCTGAGGATATAATTATTTTTGTTAATGTCAATAAAGTGAG  800

seq1  TAATTTTCAGTATATTGGTGAAAAGGCTATATTAATTCAAGACACTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCAGTATATTGGTGAAAAGGCTATATTAATTCAAGACACTTCAT  850

seq1  TAAGTCAACAGACTATGAATTTTCCAGATATTACGATTATTACTTTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAACAGACTATGAATTTTCCAGATATTACGATTATTACTTTGTCA  900

seq1  GTATGACAGCTTCTTCAACAAATTTTAATTTGTAGTGCTTATTATTTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACAGCTTCTTCAACAAATTTTAATTTGTAGTGCTTATTATTTCTA  950

seq1  TATCTTTGAATCTAAAAACTGAGTTCCCCCAGGAAATTAGTGAGAAAAGG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATCTTTGAATCTAAAAACTGAGTTCCCCCAGGGAATTAGTGAGAAAAGG  1000

seq1  CAGTC-GGATTTGACCATATCCCAGTATCAATCAAAAGC-ATTTTTCTTA  1048
      ||||| |||||||||||||| |||||||| ||||||||| ||||||  ||
seq2  CAGTCGGGATTTGACCATAT-CCAGTATC-ATCAAAAGCAATTTTTTCTA  1048

seq1  GCAACATCTTGTTGGCAATGTTTTTTTTAA-CCTATTTCTTTATTAATGT  1097
      || |||||||| |||| ||||||||||||| |||||||||||||||  ||
seq2  GC-ACATCTTG-TGGC-ATGTTTTTTTTAACCCTATTTCTTTATTATGGT  1095

seq1  GAGTTTTTATCTAACAACTATAATGCATATAATT  1131
      |||||||||||  || |||||||||||| |||||
seq2  GAGTTTTTATCCTAC-ACTATAATGCATTTAATT  1128


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