BAC Information

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BAC

Clone NameB6Ng01-284M07
Chromosome1 (Build37)
Map Location 84,396,133 - 84,397,182
singlet/doubletsinglet
Overlap geneDner
Upstream gene4930544G21Rik, 5033414K04Rik, LOC100039638
Downstream geneTrip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M07.bB6Ng01-284M07.g
ACCGA083389GA083390
length1,1841,056
definitionB6Ng01-284M07.b B6Ng01-284M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttttatcat
acagatctttcacttccttccgttagagtcacacgagatattttatattt
atttgtggctattgagaaggtgttgttttccctaatttcttttctcagcc
tggtttattccttgtgtgagaaaggccatgacttgtttgagttaattata
tccagctacttcacgaagctgttttatcaggttaagggatctctcggttt
gaactttgaggtcctttatatacatatctatcactcgcaaggtagtttga
actccctcttcagagtgtgactagctcttgagct
gaattcaaggtttactgctcagaatacctcagggaagccaccaagggtcc
catcttagcagcaagacacaacaatcactccagtagagggtcaaaacaaa
gtgatcaacataaaaaggttggcattataaaactagccccaccactcaca
gtgttaacatacaatgaccagaaagaggaggagaggatgatgtagtaaga
gtccacctgtccacttttaaaagtcatgtagctacagtagattttagatg
tcaaggctgtattggcaattgaacaggcacatcgatcaacaaaaaagaag
aaagaactcaaaatagaccaacacaaatattgccaactgatttttgacca
aggttcaaaagcagttcgatgaaaggaaacagatggcctttgtaactaat
gaaacaaagtttaaaaggaaaaaaacaaaacaaaacaaataatgtctagt
tggaaaattccataaaggaacgcagttggtgaagcaaagtaacactcaag
gacagggcttgaaaacctgggatgccgacctaataactttggaaaggagt
tgcattagaatgctgtccctgttgagatagggtcttatgtagtccagact
gactttgaacttactatgtagtaaaggatacatagtgaccttgaatcctc
ctgcctccacctccggagtgctgagatttatatgtttgaaccaccatgcc
tgcttaggcttggttaaactaattaaactataagcacaccctatattcta
gctggaaaaatgattgcctaaaagaacataaggtagcaagtttgctactg
ctatggcccatattggaattgaaagacaactgaatggatgttggaagtag
aaactacttaggttgctgttggtgtggggagttatggataaataagaaaa
gaccaagaggattccttgttgtgcttgattagagttggatatcaccattt
aaccctccattaaacctagataggtccagataagttgcatgggtgggatg
tacacgtaccatttacgcacattagtatacgtacatagcactttcctgtt
cagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84396133_84397182
seq2: B6Ng01-284M07.g_71_1126

seq1  GAATTCAAGGTTTACTGCTCAGAATACCTCAGGGAAGCCACCAAGGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTTTACTGCTCAGAATACCTCAGGGAAGCCACCAAGGGTCC  50

seq1  CATCTTAGCAGCAAGACACAACAATCACTCCAGTAGAGGGTCAAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGCAGCAAGACACAACAATCACTCCAGTAGAGGGTCAAAACAAA  100

seq1  GTGATCAACATAAAAAGGTTGGCATTATAAAACTAGCCCCACCACTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAACATAAAAAGGTTGGCATTATAAAACTAGCCCCACCACTCACA  150

seq1  GTGTTAACATACAATGACCAGAAAGAGGAGGAGAGGATGATGTAGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAACATACAATGACCAGAAAGAGGAGGAGAGGATGATGTAGTAAGA  200

seq1  GTCCACCTGTCCACTTTTAAAAGTCATGTAGCTACAGTAGATTTTAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACCTGTCCACTTTTAAAAGTCATGTAGCTACAGTAGATTTTAGATG  250

seq1  TCAAGGCTGTATTGGCAATTGAACAGGCACATCGATCAACAAAAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTGTATTGGCAATTGAACAGGCACATCGATCAACAAAAAAGAAG  300

seq1  AAAGAACTCAAAATAGACCAACACAAATATTGCCAACTGATTTTTGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTCAAAATAGACCAACACAAATATTGCCAACTGATTTTTGACCA  350

seq1  AGGTTCAAAAGCAGTTCGATGAAAGGAAACAGATGGCCTTTGTAACTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAAAAGCAGTTCGATGAAAGGAAACAGATGGCCTTTGTAACTAAT  400

seq1  GAAACAAAGTTTAAAAGGAAAAAAACAAAACAAAACAAATAATGTCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGTTTAAAAGGAAAAAAACAAAACAAAACAAATAATGTCTAGT  450

seq1  TGGAAAATTCCATAAAGGAACGCAGTTGGTGAAGCAAAGTAACACTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTCCATAAAGGAACGCAGTTGGTGAAGCAAAGTAACACTCAAG  500

seq1  GACAGGGCTTGAAAACCTGGGATGCCGACCTAATAACTTTGGAAAGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGCTTGAAAACCTGGGATGCCGACCTAATAACTTTGGAAAGGAGT  550

seq1  TGCATTAGAATGCTGTCCCTGTTGAGATAGGGTCTTATGTAGTCCAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAATGCTGTCCCTGTTGAGATAGGGTCTTATGTAGTCCAGACT  600

seq1  GACTTTGAACTTACTATGTAGTAAAGGATACATAGTGACCTTGAATCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGAACTTACTATGTAGTAAAGGATACATAGTGACCTTGAATCCTC  650

seq1  CTGCCTCCACCTCCGGAGTGCTGAGATTTATATGTTTGAACCACCATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCACCTCCGGAGTGCTGAGATTTATATGTTTGAACCACCATGCC  700

seq1  TGCTTAGGCTTGGTTAAACTAATTAAACTATAAGCACACCCTATATTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGGCTTGGTTAAACTAATTAAACTATAAGCACACCCTATATTCTA  750

seq1  GCTGGAAAAATGATTGCCTAAAAGAACATAAGGTAGCAAGTTTGCTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAAATGATTGCCTAAAAGAACATAAGGTAGCAAGTTTGCTACTG  800

seq1  CTATGGCCCATATTGGAATTGAAAGACAACTGAATGGATGTTGGAAGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCCCATATTGGAATTGAAAGACAACTGAATGGATGTTGGAAGTAG  850

seq1  AAACTACTTAGGTTGCTGTTGGTGTGGGGAGTTATGGATAAATAAGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTTAGGTTGCTGTTGGTGTGGGGAGTTATGGATAAATAAGAAAA  900

seq1  GACCAAGAGGATTCC-TGTGGTGCTGGATTAGAGTTGGATATCACCATT-  948
      ||||||||||||||| ||| ||||| ||||||||||||||||||||||| 
seq2  GACCAAGAGGATTCCTTGTTGTGCTTGATTAGAGTTGGATATCACCATTT  950

seq1  -AACCTCCATTAAACTTAAGATAGGTCCAGATAAG-TGCAT-GGTGGGAT  995
       | |||||||||||| | ||||||||||||||||| ||||| ||||||||
seq2  AACCCTCCATTAAACCT-AGATAGGTCCAGATAAGTTGCATGGGTGGGAT  999

seq1  GTACACGTACCATTTACGCACATTAGTATACATACATA-CAC-TTCCTTG  1043
      ||||||||||||||||||||||||||||||| |||||| ||| |||||  
seq2  GTACACGTACCATTTACGCACATTAGTATACGTACATAGCACTTTCCTGT  1049

seq1  TCAGCCA  1050
      |||||||
seq2  TCAGCCA  1056