BAC Information

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BAC

Clone NameB6Ng01-284O08
Chromosome1 (Build37)
Map Location 70,986,644 - 70,987,777
singlet/doubletsinglet
Overlap genenone
Upstream geneSpag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804
Downstream geneLOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284O08.bB6Ng01-284O08.g
ACCGA083485GA083486
length1,138897
definitionB6Ng01-284O08.b B6Ng01-284O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaagtagaagattcgtttcatggtaacatgaacctatacta
gatagccataggaatcatggtacagttgctgactattctttgttgaaaac
agaaacagaaaaggatgaccaatgtgagtaagcagtgacagaggggataa
aacacacacacatcactgaaaacattctccatacttaataaactaattag
cagatatgtttatacaaaaaaaatgaatactggttgctatttctcttggt
gggaatagggacttgagaacaattaaaatttctggaatatacatttaata
tatttaattaccaaaatataactcattagagaaattgaatcttggaatga
atatggctgaagagcgacttagacatttgaaaatcacacacacacacaca
cacacacacacacacacacacacacacacacacacacaccagtctacatt
taaagcttaaaacacaaaattataaagcagagaaaaattaaaggacccag
aaactggctccagtagtcacaacatctgtctgtcaagcaatccataagga
gaacagagtggatgaaagaaaagagaagtccgagaaagaactctgcccca
cccccacccacccacccacccccaaaaaacactttcagattgaagagcca
ccagtctcaagaaaagtaaattaatggtaaaatttctcattgagccatcc
tcttgcaaaaaaaaaaaattaaacattgaatctataaaaatagctgaaag
gcttgggtggtttggaggagatagccaagaataaaatatagccagatgag
caacgactgcagcacaagtaatgtcaaattctcagtaaacgcactaatgt
ttcaaatgtcagttggaaatgattttaaaataataattttatgattggtc
aaactgtggaatgaaggtatagatgaagtagttacatttttcggacagct
tgagggactggagaaactttatcctccgaaacccctttagtcagaaaaag
cacttaaaggttattgttctagtgcaattgaaaaaagtagttcagtcgga
gaactgatatttaaaggctggtcaacagagcaggagtgtcatgagacagt
cgccccaaggtcaacatcaaagccaagaagttcgaagc
gaattcagatttggtgacctttaaggcagccaaaccaataaaggggaagc
agtgggtttatgcaggtcagaaggaaggccttcccaggctgctgctgtat
tgttgcacataggtggatttgcagctgccacagttcatggtacttgtgat
gattaatcttgattgtcaccctttttggagcctggtcaagtggttcacac
ctgtaaccttagcattcaggaagctgaggcaggagtattactgtgaattg
aaggacaacttggattatgtagctagtgtaaggctagccagagcacaaaa
caaacactctttcccagtcactccactcctgataccaatgtctttcttag
tcactgttctattgctgtgaagaggtaccatgatgaagacagttcttata
aaggaaacacttacttgggggtgtacttagagtttcagagtgttcataat
tattgtgctagaggagtagcttgagagctttactttgaggtctgcaggta
tcaaaaagagacagacagacagagacagatatacagacacacagagagac
agagaatatgagcctgtcggggccttttttatttaaactgccacacattt
tactcccctgatccacatagacttgtagtcacatcacaaatgtaaaagtg
tgttttagtccaattttcaaatgtccttttacatagtctttcagtctcaa
cactgtttaaaagtcaggggtcttttctgagactcaagggcaatctctga
attgtaatccgcttataaaatcagtttccaaaacttagatcacatactac
caacatacaggggtacagaatacgtattaccatttcaaggggggagagaa
gagggaatagtgaaaaaatcttagaccaaaagcttctcttgaaaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70986644_70987777
seq2: B6Ng01-284O08.b_49_1186

seq1  GAATTCTTTCAAGTAGAAGATTCGTTTCATGGTAACATGAACCTATACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAGTAGAAGATTCGTTTCATGGTAACATGAACCTATACTA  50

seq1  GATAGCCATAGGAATCATGGTACAGTTGCTGACTATTCTTTGTTGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCATAGGAATCATGGTACAGTTGCTGACTATTCTTTGTTGAAAAC  100

seq1  AGAAACAGAAAAGGATGACCAATGTGAGTAAGCAGTGACAGAGGGGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGAAAAGGATGACCAATGTGAGTAAGCAGTGACAGAGGGGATAA  150

seq1  AACACACACACATCACTGAAAACATTCTCCATACTTAATAAACTAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACATCACTGAAAACATTCTCCATACTTAATAAACTAATTAG  200

seq1  CAGATATGTTTATACAAAAAAAATGAATACTGGTTGCTATTTCTCTTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGTTTATACAAAAAAAATGAATACTGGTTGCTATTTCTCTTGGT  250

seq1  GGGAATAGGGACTTGAGAACAATTAAAATTTCTGGAATATACATTTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAGGGACTTGAGAACAATTAAAATTTCTGGAATATACATTTAATA  300

seq1  TATTTAATTACCAAAATATAACTCATTAGAGAAATTGAATCTTGGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATTACCAAAATATAACTCATTAGAGAAATTGAATCTTGGAATGA  350

seq1  ATATGGCTGAAGAGCGACTTAGACATTTGAAAATCACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTGAAGAGCGACTTAGACATTTGAAAATCACACACACACACACA  400

seq1  CACACACACACACACACACACACACACACACACACACACCAGTCTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACCAGTCTACATT  450

seq1  TAAAGCTTAAAACACAAAATTATAAAGCAGAGAAAAATTAAAGGACCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTAAAACACAAAATTATAAAGCAGAGAAAAATTAAAGGACCCAG  500

seq1  AAACTGGCTCCAGTAGTCACAACATCTGTCTGTCAAGCAATCCATAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCTCCAGTAGTCACAACATCTGTCTGTCAAGCAATCCATAAGGA  550

seq1  GAACAGAGTGGATGAAAGAAAAGAGAAGTCCGAGAAAGAACTCTGCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGTGGATGAAAGAAAAGAGAAGTCCGAGAAAGAACTCTGCCCCA  600

seq1  CCCCCACCCACCCACCCACCCCCAAAAAACACTTTCAGATTGAAGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCACCCACCCACCCCCAAAAAACACTTTCAGATTGAAGAGCCA  650

seq1  CCAGTCTCAAGAAAAGTAAATTAATGGTAAAATTTCTCATTGAGCCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCAAGAAAAGTAAATTAATGGTAAAATTTCTCATTGAGCCATCC  700

seq1  TCTTGCAAAAAAAAAAAATTAAACATTGAATCTATAAAAATAGCTGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAAAAAAAAAAAATTAAACATTGAATCTATAAAAATAGCTGAAAG  750

seq1  GCTTGGGTGGTTTGGAGGAGATAGCCAAGAATAAAATATAGCCAGATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGTGGTTTGGAGGAGATAGCCAAGAATAAAATATAGCCAGATGAG  800

seq1  CAACGACTGCAGCACAAGTAATGTCAAATTCTCAGTAAACGCACTAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGACTGCAGCACAAGTAATGTCAAATTCTCAGTAAACGCACTAATGT  850

seq1  TTCAAATGTCAGTTGGAAATGA-TTTAAAATAATAATTTTATGATTGGTC  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCAAATGTCAGTTGGAAATGATTTTAAAATAATAATTTTATGATTGGTC  900

seq1  AAACTGTGGAATGAAGGTATAGATGAAGTAGTTACATTTTTCGGACAGC-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAACTGTGGAATGAAGGTATAGATGAAGTAGTTACATTTTTCGGACAGCT  950

seq1  TGAGGGACTGGAGAAAC-TTATCCTCCGAAAACCC-TTAGTCAG-AAAAG  995
      ||||||||||||||||| ||||||||||||| ||| |||||||| |||||
seq2  TGAGGGACTGGAGAAACTTTATCCTCCGAAACCCCTTTAGTCAGAAAAAG  1000

seq1  CACTTAAA-GTTATTG-TCTAGTGCAA-TGAAAAAAGTAGTTCAAGTCGG  1042
      |||||||| ||||||| |||||||||| ||||||||||||||| ||||||
seq2  CACTTAAAGGTTATTGTTCTAGTGCAATTGAAAAAAGTAGTTC-AGTCGG  1049

seq1  AGAAATTGATATTAAAGAAATGGTGGAACAGAGCCAGGAGTGTCATGAGA  1092
      || || ||||||| ||    ||||  ||||||| ||||||||||||||||
seq2  AG-AACTGATATTTAAAGGCTGGT-CAACAGAG-CAGGAGTGTCATGAGA  1096

seq1  CAGTCGCCCCAGGTTCCAACATCAAAG-CAAGAAGTCCGAAGC  1134
      ||||||||||| | | ||||||||||| |||||||| ||||||
seq2  CAGTCGCCCCAAGGT-CAACATCAAAGCCAAGAAGTTCGAAGC  1138