BAC Information

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BAC

Clone NameB6Ng01-287A04
Chromosome1 (Build37)
Map Location 144,361,584 - 144,362,744
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287A04.bB6Ng01-287A04.g
ACCGA085053GA085054
length1,162950
definitionB6Ng01-287A04.b B6Ng01-287A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatggtgatttcattaaatccatagattacttttggtggaaca
aaaagcattttactatagcaattccatttatccatgagattgagagatct
ttccaacttctgctatcttcaccaaattttttaattacttcaagcatcta
tcataaaaggtgtttactatttcggttagaattaacccaagatatcttat
attatttgatactattctaaaagacattgcttctttctcagtctgttcat
tgtttgaatataggagtgctactgatttgattttacatgttgaatttttg
ccgagctactttgtttaaaaaatgtttactaattataggagattcctggt
gaatcttttaggtaaagaaatttaggaaaacattatttccccttgatttg
ccttgttcaactttgatagggtagtttttgttttaacttactgtattttg
tttttaaagcttagaagaggcctgtttggtttgaatgagaaatggaatta
tatatatggataggagtgcagatgtgaggaactttagaaagtagggggag
taaaaatcataatcagggtatattatgggataaaaatacaaatcatattg
cattacatcgatactattatatcaccttaaaatacagatactttgacttc
ttcctttccaatttgtttcctctttatcttcttcagatttcttattgtcc
tagttaagaaatcatgaaatagggctagagagatggctcagtggttaaga
gcactgactgctcttcaaaaggtcctaaaaaacaaaaaatgaaatcatga
aatatactgaataggcatgaagagatttgataacatttgctttttcctga
tcgtaatggattttgttttgtttttgtttctctctacttaagttggtgtt
gactatgggatatgcagtacccacaagtaatacaaacacagagatgtgga
tcctaggttaatagatatatctacaaaatattcttgtacataaggcttag
gtgacatattcagattaggaggctggaagattataagagccaagagatta
ggcactttgttctgaaaatgtatcactagtattatcagaagcttatacct
aaagtcttaccggatggtatagaggatgacatacaaatcagtatggactc
tcccagaccaaa

gaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactt
tctaaggaaattcaagacagtctatcagaagtaaagtggaaaatggcttt
acaagttaggtttggccttgaattttttctggtgttaggagcccttttgt
tccttttcacatgttatatagtgcttaagatagggctgaaaattctagag
gaaattcaggacagtctatcagaagtaaagcggggagagagagtaggagc
aaggagaaacggtaagtatacaggcctttccaagggtcttgaacccgagg
aaaagttaaggtcaggtaggaatacctggggagagattagaaggaagaaa
aagaaaaaagaaaagaaaaaagatcaattagcggaggtctctaggagata
ctcgtcactagatgagctcaggaagccagctcttagtaactctgaagcaa
gtgaagaatcctcctctgaggaaacagactgggagaaaaaagcggctcat
tatgaaagaaaaggataccagccgccaagtaaagtgctaactagtcattt
aaggaaaaagccaaaagcggctggcgaaggccagtttgctaattggcctc
agggcaatcggctaccaggtgcactcccgccctatgcggagtccccgccc
tgcgtagtgcgtcagcccgtagtgcgtcagcaatgcgcagagaggcagtg
cgcagactcattcattccccgagaggaacaaagaaaaatacaacaggcat
ttccagtctttgaaggagccgagggtgggcgtgtccacgctccggtagaa
tatgtgcagattaaatatggaatcaatgctaattttgccttggtgcagtt
ggacaggcttgccggcgtggcactgactcctgccgactggcaaatgattg
caaaagccgctctccctagtatggcccaaatatgtgggaatggccgagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144361584_144362744
seq2: B6Ng01-287A04.b_46_1207

seq1  GAATTCTAATGGTGATTTCATTAAATCCATAGATTACTTTTGGTGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGGTGATTTCATTAAATCCATAGATTACTTTTGGTGGAACA  50

seq1  AAAAGCATTTTACTATAGCAATTCCATTTATCCATGAGATTGAGAGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTTTACTATAGCAATTCCATTTATCCATGAGATTGAGAGATCT  100

seq1  TTCCAACTTCTGCTATCTTCACCAAATTTTTTAATTACTTCAAGCATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTTCTGCTATCTTCACCAAATTTTTTAATTACTTCAAGCATCTA  150

seq1  TCATAAAAGGTGTTTACTATTTCGGTTAGAATTAACCCAAGATATCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAGGTGTTTACTATTTCGGTTAGAATTAACCCAAGATATCTTAT  200

seq1  ATTATTTGATACTATTCTAAAAGACATTGCTTCTTTCTCAGTCTGTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGATACTATTCTAAAAGACATTGCTTCTTTCTCAGTCTGTTCAT  250

seq1  TGTTTGAATATAGGAGTGCTACTGATTTGATTTTACATGTTGAATTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAATATAGGAGTGCTACTGATTTGATTTTACATGTTGAATTTTTG  300

seq1  CCGAGCTACTTTGTTTAAAAAATGTTTACTAATTATAGGAGATTCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCTACTTTGTTTAAAAAATGTTTACTAATTATAGGAGATTCCTGGT  350

seq1  GAATCTTTTAGGTAAAGAAATTTAGGAAAACATTATTTCCCCTTGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTTAGGTAAAGAAATTTAGGAAAACATTATTTCCCCTTGATTTG  400

seq1  CCTTGTTCAACTTTGATAGGGTAGTTTTTGTTTTAACTTACTGTATTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCAACTTTGATAGGGTAGTTTTTGTTTTAACTTACTGTATTTTG  450

seq1  TTTTTAAAGCTTAGAAGAGGCCTGTTTGGTTTGAATGAGAAATGGAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGCTTAGAAGAGGCCTGTTTGGTTTGAATGAGAAATGGAATTA  500

seq1  TATATATGGATAGGAGTGCAGATGTGAGGAACTTTAGAAAGTAGGGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGATAGGAGTGCAGATGTGAGGAACTTTAGAAAGTAGGGGGAG  550

seq1  TAAAAATCATAATCAGGGTATATTATGGGATAAAAATACAAATCATATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCATAATCAGGGTATATTATGGGATAAAAATACAAATCATATTG  600

seq1  CATTACATCGATACTATTATATCACCTTAAAATACAGATACTTTGACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATCGATACTATTATATCACCTTAAAATACAGATACTTTGACTTC  650

seq1  TTCCTTTCCAATTTGTTTCCTCTTTATCTTCTTCAGATTTCTTATTGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCAATTTGTTTCCTCTTTATCTTCTTCAGATTTCTTATTGTCC  700

seq1  TAGTTAAGAAATCATGAAATAGGGCTAGAGAGATGGCTCAGTGGTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGAAATCATGAAATAGGGCTAGAGAGATGGCTCAGTGGTTAAGA  750

seq1  GCACTGACTGCTCTTCAAAAGGTCCTAAAAAACAAAAAATGAAATCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGACTGCTCTTCAAAAGGTCCTAAAAAACAAAAAATGAAATCATGA  800

seq1  AATATACTGAATAGGCATGAAGAGATTTGATAACATTTGCTTTTTCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGAATAGGCATGAAGAGATTTGATAACATTTGCTTTTTCCTGA  850

seq1  TCGTAATGGATTTTGTTTTGTTTTTGTTTCTCTCTACTTAAGTTGGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAATGGATTTTGTTTTGTTTTTGTTTCTCTCTACTTAAGTTGGTGTT  900

seq1  GACTAT-GGATATGCAGTACCCACAAGTAATACAAACACAGAGATGTGGA  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGGGATATGCAGTACCCACAAGTAATACAAACACAGAGATGTGGA  950

seq1  TCCTAGGTTAATAGATATATCTACAAAATATTCTTGTACATAAGGCTTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTAATAGATATATCTACAAAATATTCTTGTACATAAGGCTTAG  1000

seq1  GTGACATA-TCAGATTAAGAGGCTGGAAGATTATAAGAGCCAGAGGATTA  1048
      |||||||| |||||||| ||||||||||||||||||||||||   |||| 
seq2  GTGACATATTCAGATTAGGAGGCTGGAAGATTATAAGAGCCAAGAGATT-  1049

seq1  AGGCAC-TTGTTCTGAAAATGTATCACTAAGTATTATCAGAAGC-TATAC  1096
      |||||| ||||||||||||||||||||| ||||||||||||||| |||||
seq2  AGGCACTTTGTTCTGAAAATGTATCACT-AGTATTATCAGAAGCTTATAC  1098

seq1  CCAAAAGGTCTTACCAGAAGGTATAGAGGATGACA-ACAAATCAGTATGA  1145
      | |||  |||||||| || |||||||||||||||| ||||||||||||| 
seq2  CTAAA--GTCTTACCGGATGGTATAGAGGATGACATACAAATCAGTATGG  1146

seq1  ACTCACCAAGACCAAA  1161
      |||| || ||||||||
seq2  ACTCTCCCAGACCAAA  1162


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