BAC Information

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BAC

Clone NameB6Ng01-287L11
Chromosome1 (Build37)
Map Location 105,650,357 - 105,651,474
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041067
Downstream geneLOC383546, LOC100041134
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287L11.bB6Ng01-287L11.g
ACCGA085563GA085564
length1,1101,200
definitionB6Ng01-287L11.b B6Ng01-287L11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatttatgttttcaagaaaacacaatgaatgacagctacctaa
aaaaaaaaaaaaaaaaaaaaaattatctccacgttcctattgaacagagg
gaaggggaaggtcatttattgtcttcttttctcctatctatcagaaaata
ccagaacaatacccttttaaagaaaaaaatggtttagaatcctagattac
aatcctcatttcagggaattcaaggctgctggggcatgcagtagctcttg
tctacacagacaagagaaaagagcaatgacacattgaatggttgttaact
atcagctcactatctcttcattcactcaggattccagcccctgaaatggt
ccatgacatttctagtgtagctcttcacactttaattaacctagttaaga
aattttctcataggcataccattatagtctaacttagtctaaataataac
tcattgagatttcttcctagttacaatttcttcctagttgacaaattctt
acaatttatcaagccaacaaagatatttagatatcacaacccattcagat
tacaattgatgtttatttgaacagctggagttatctaataattaaagtgg
cttattgttttctctaatatcatcttccaaaaaattcaaaaggtacaaaa
ttctatggaaactgaagaagttcagatacttgccttcccacacatgagca
aattatatgtgacagatgcaacttaacagtcaagtctatcttaatcccac
ctctgaactcttttccttggacatagtttgttctttccctttaaaaaaga
ccatgctgtttgatttccactttaattatactgaaatgtggttggacaat
taagaagcaattatatcagaggatctctacctttaaggatgcattaaaac
atttctaccaagtttatatcaggtcttactaaagtaaacttctcattaaa
aacaccctgactagacctctcactctcctgaacacagatctattgtccac
tatgaataaatataataaagcctccataagtgtcgctgcatatctaggac
ttctggctttcacatcataaatcaagtaatatattctctaattaattaac
ttagtctcag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaaccctcctccattgttggtg
ggattgcaagcttctacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccacaactggtaagaaggaaacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacataaaatgtggtacatctacataatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaaccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcccaaa
tgaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aagaatgaagactgaagtgtgaacactatgcctctccttagaattgggaa
caaaacacccattgaaggagttacagagacaaagtttggaggtgagatga
aaggatggaccacgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcaccagggctcc
caaatggaaggagctagataaagtaccaaggagctaaagggatctgcacc
ctattaggtggaacaacattatgaacttacagtaccccggagctctgact
ctagctgcaatattgtatcaaagatgggcctagttcgcattccactggaa
agagaaggtcatgacaaggcaaatttatatcgcctcagtaatgttaacgc
agggtcaaatggggactggtggcctaagtgtagacgtgagagctcgtcgt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_105650357_105651474
seq2: B6Ng01-287L11.b_48_1157

seq1  GAATTCAGATTTATGTTTTCAAGAAAACACAATGAATGACAGCTACCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTATGTTTTCAAGAAAACACAATGAATGACAGCTACCTAA  50

seq1  AAAAAAAAAAAAAAAAAAAAAATTATCTCCACGTTCCTATTGAACAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAATTATCTCCACGTTCCTATTGAACAGAGG  100

seq1  GAAGGGGAAGGTCATTTATTGTCTTCTTTTCTCCTATCTATCAGAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAAGGTCATTTATTGTCTTCTTTTCTCCTATCTATCAGAAAATA  150

seq1  CCAGAACAATACCCTTTTAAAGAAAAAAATGGTTTAGAATCCTAGATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACAATACCCTTTTAAAGAAAAAAATGGTTTAGAATCCTAGATTAC  200

seq1  AATCCTCATTTCAGGGAATTCAAGGCTGCTGGGGCATGCAGTAGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCATTTCAGGGAATTCAAGGCTGCTGGGGCATGCAGTAGCTCTTG  250

seq1  TCTACACAGACAAGAGAAAAGAGCAATGACACATTGAATGGTTGTTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACAGACAAGAGAAAAGAGCAATGACACATTGAATGGTTGTTAACT  300

seq1  ATCAGCTCACTATCTCTTCATTCACTCAGGATTCCAGCCCCTGAAATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCACTATCTCTTCATTCACTCAGGATTCCAGCCCCTGAAATGGT  350

seq1  CCATGACATTTCTAGTGTAGCTCTTCACACTTTAATTAACCTAGTTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACATTTCTAGTGTAGCTCTTCACACTTTAATTAACCTAGTTAAGA  400

seq1  AATTTTCTCATAGGCATACCATTATAGTCTAACTTAGTCTAAATAATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCATAGGCATACCATTATAGTCTAACTTAGTCTAAATAATAAC  450

seq1  TCATTGAGATTTCTTCCTAGTTACAATTTCTTCCTAGTTGACAAATTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGATTTCTTCCTAGTTACAATTTCTTCCTAGTTGACAAATTCTT  500

seq1  ACAATTTATCAAGCCAACAAAGATATTTAGATATCACAACCCATTCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTATCAAGCCAACAAAGATATTTAGATATCACAACCCATTCAGAT  550

seq1  TACAATTGATGTTTATTTGAACAGCTGGAGTTATCTAATAATTAAAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTGATGTTTATTTGAACAGCTGGAGTTATCTAATAATTAAAGTGG  600

seq1  CTTATTGTTTTCTCTAATATCATCTTCCAAAAAATTCAAAAGGTACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTTTCTCTAATATCATCTTCCAAAAAATTCAAAAGGTACAAAA  650

seq1  TTCTATGGAAACTGAAGAAGTTCAGATACTTGCCTTCCCACACATGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGGAAACTGAAGAAGTTCAGATACTTGCCTTCCCACACATGAGCA  700

seq1  AATTATATGTGACAGATGCAACTTAACAGTCAAGTCTATCTTAATCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATGTGACAGATGCAACTTAACAGTCAAGTCTATCTTAATCCCAC  750

seq1  CTCTGAACTCTTTTCCTTGGACATAGTTTGTTCTTTCCCTTTAAAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACTCTTTTCCTTGGACATAGTTTGTTCTTTCCCTTTAAAAAAGA  800

seq1  CCATGCTGTTTGATTTCCACTTTAATTATACTGAAATGTGGTTGGACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGTTTGATTTCCACTTTAATTATACTGAAATGTGGTTGGACAAT  850

seq1  TAAGAAGCAATTATATCAGAGGATCTCTACCTTTAAGGATGCATTAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGCAATTATATCAGAGGATCTCTACCTTTAAGGATGCATTAAAAC  900

seq1  ATTTCTACCAAGTTTATATCAGGTCTTACTAAAGTAAAC-TCTCATTAAA  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTCTACCAAGTTTATATCAGGTCTTACTAAAGTAAACTTCTCATTAAA  950

seq1  AACACCCTGACTAGACCTCTCACTCTCCTGAACACAGATCTAATTGTCCA  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACACCCTGACTAGACCTCTCACTCTCCTGAACACAGATCT-ATTGTCCA  999

seq1  CTATGAATTAAATTATAATAAAGCCTCCATAAGTTGTCGCTGCCATATCT  1049
      ||||||||  || |||||||||||||||||||| |||||||| |||||||
seq2  CTATGAAT--AAATATAATAAAGCCTCCATAAG-TGTCGCTG-CATATCT  1045

seq1  AGGACTTCCTGGCTTTCCACATCATAAATCAAAGTAATATATTCTTCTTA  1099
      ||||||| |||||||| ||||||||||||| ||||||||||||||   ||
seq2  AGGACTT-CTGGCTTT-CACATCATAAATC-AAGTAATATATTCT--CTA  1090

seq1  ATTAATT-ACCTAGTCTCAG  1118
      ||||||| || |||||||||
seq2  ATTAATTAACTTAGTCTCAG  1110