BAC Information

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BAC

Clone NameB6Ng01-288H15
Chromosome1 (Build37)
Map Location 67,337,357 - 67,488,779
singlet/doubletdoublet
Overlap genenone
Upstream geneMtap2, C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneKif22-ps, Erbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288H15.bB6Ng01-288H15.g
ACCGA086129GA086130
length1,1791,104
definitionB6Ng01-288H15.b B6Ng01-288H15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,337,357 - 67,338,518)(67,487,671 - 67,488,779)
sequence
gaattcaatagagatgcaaatcataggaggaaaatacctaaatgaattgt
cttagtctatttttctcttgataataatgcaatgatacagggtaggtaaa
atatcctcttaagaaagttttacttttgctaatggctctgttttaagttt
gaaggttatcattcagggctggcctggttacagaggactgaggttgtaca
gatgccaaaaaacagttacaaatgtgtgtgtccagtccctcgctttgtaa
aggcatccgatgctcagtcctggggtcccccagtgatgactttaatcctc
tgcctcacaaagattctgtgtctaaatatcacagctctgctgagttttta
agctcttaacatttcaaaatggcatgaaactccaacgtgagatgtagttg
agacaaatacactcaaattgcagtagacatctttaataacgcagcaagtc
tcagcaaatgactgtgctgagactatttaatattaagctgttttgcgtat
catcttataggcatatttattagatgctaagtcacttgaaacgttcttaa
tttgtgtaattctgaacaatactgtcaagtaattattatctcccaaatta
tgggcatctagtcccctatcaaaggatcccatgattctctcctttgttcc
cttttctgtccatccctcttccttttcctctttctccactttagtttgta
cttttccaagttctttccatttctcacctttctttctctttcatttcttc
ttttctttctctctttcctttgctccccccttcctcctcattttctttat
ctcttgttcccctgcttccttacccactatctcaggctcctcatcctttt
ctgtgcatgtctgttacctgtggagattgtgaaaacaatgatttgctcat
atctgagccctttattttgagaggccttggttggaactcaaaactgtgta
cttccaaaaagttcctttagtgataatagttctgctgcaccaaggactat
acttaaagagccagttctttatctgatgtgatggttcagggttcctgctt
ccaaatttaaatcaaataagacctttagaataggagctttagattgttta
gaaaaatttggccctgtattggtcctgtgcaatattttggatcatcaatt
ccacaatgaatggaattggcgtttacaaa
gaattcactctcgcacctgcgtacaaggcttgtttactagttagggcaca
gcggaggcccgcgccatcttataatggcgattgctcgcggcacacacggc
tctcctcagagattactggcggcacacatgcgattgctcgcagcacttac
cggctctccacagctagtgttctgttttattgctacagattgatgtgtct
gggggaaggtctgcaggcagcctaccagggtttctggtagttggggtctg
tgacctattttctgctttgaagccttcattgcagaagattctgaaggcat
gcttgacctacacagtttcactaacttatcagtgaattagacacatgaag
aattgacatttcacctcaaaagtgaaggagatgaacaagaattgtaccag
gctttatataatttattttatgttattattattatttattattaatttgc
aagattattaattcatttactcaatgacatcttgacatttggttcataca
tactgagttgagattaaacagaaaagaaaataagaacaaataacaatgac
tttcattataacaaattgtttttataacaaagattcaattcatgaacaat
tctaaaatgattctaagtcttgatttataaatggttttaaatgaagtata
ccaatgaccctcaaaaaatagctgatatggtattagacaaatgatgtaaa
taagaagagtctggaacctcttgtgctaaaaaggaagtagttaaaagtgg
gtagaaattagagtacataaaaaagacaaaggaatacggtgcagtaataa
taattggactaattgaacattttgataaacatttctatcatgagattata
acgacagggagaatacaataaataaccacctggttagttctattaataaa
tggttagtattcaaggtatactttgacccacccagttcttgaatacttct
tgcttgtaattctcaagataagtgtggaatgtaccaagatagaaaagaac
tgtagagaatatccaagtcttattttctgccattaggaatgtaacagtaa
aggaggaaatggttgccccgaacagctgtttcttgtggagacagttctac
agtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67337357_67338518
seq2: B6Ng01-288H15.b_46_1224

seq1  GAATTCAATAGAGATGCAAATCATAGGAGGAAAATACCTAAATGAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGAGATGCAAATCATAGGAGGAAAATACCTAAATGAATTGT  50

seq1  CTTAGTCTATTTTTCTCTTGATAATAATGCAATGATACAGGGTAGGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTATTTTTCTCTTGATAATAATGCAATGATACAGGGTAGGTAAA  100

seq1  ATATCCTCTTAAGAAAGTTTTACTTTTGCTAATGGCTCTGTTTTAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTCTTAAGAAAGTTTTACTTTTGCTAATGGCTCTGTTTTAAGTTT  150

seq1  GAAGGTTATCATTCAGGGCTGGCCTGGTTACAGAGGACTGAGGTTGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTATCATTCAGGGCTGGCCTGGTTACAGAGGACTGAGGTTGTACA  200

seq1  GATGCCAAAAAACAGTTACAAATGTGTGTGTCCAGTCCCTCGCTTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAAAAAACAGTTACAAATGTGTGTGTCCAGTCCCTCGCTTTGTAA  250

seq1  AGGCATCCGATGCTCAGTCCTGGGGTCCCCCAGTGATGACTTTAATCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCCGATGCTCAGTCCTGGGGTCCCCCAGTGATGACTTTAATCCTC  300

seq1  TGCCTCACAAAGATTCTGTGTCTAAATATCACAGCTCTGCTGAGTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACAAAGATTCTGTGTCTAAATATCACAGCTCTGCTGAGTTTTTA  350

seq1  AGCTCTTAACATTTCAAAATGGCATGAAACTCCAACGTGAGATGTAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAACATTTCAAAATGGCATGAAACTCCAACGTGAGATGTAGTTG  400

seq1  AGACAAATACACTCAAATTGCAGTAGACATCTTTAATAACGCAGCAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATACACTCAAATTGCAGTAGACATCTTTAATAACGCAGCAAGTC  450

seq1  TCAGCAAATGACTGTGCTGAGACTATTTAATATTAAGCTGTTTTGCGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAATGACTGTGCTGAGACTATTTAATATTAAGCTGTTTTGCGTAT  500

seq1  CATCTTATAGGCATATTTATTAGATGCTAAGTCACTTGAAACGTTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTATAGGCATATTTATTAGATGCTAAGTCACTTGAAACGTTCTTAA  550

seq1  TTTGTGTAATTCTGAACAATACTGTCAAGTAATTATTATCTCCCAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAATTCTGAACAATACTGTCAAGTAATTATTATCTCCCAAATTA  600

seq1  TGGGCATCTAGTCCCCTATCAAAGGATCCCATGATTCTCTCCTTTGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCTAGTCCCCTATCAAAGGATCCCATGATTCTCTCCTTTGTTCC  650

seq1  CTTTTCTGTCCATCCCTCTTCCTTTTCCTCTTTCTCCACTTTAGTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTCCATCCCTCTTCCTTTTCCTCTTTCTCCACTTTAGTTTGTA  700

seq1  CTTTTCCAAGTTCTTTCCATTTCTCACCTTTCTTTCTCTTTCATTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAAGTTCTTTCCATTTCTCACCTTTCTTTCTCTTTCATTTCTTC  750

seq1  TTTTCTTTCTCTCTTTCCTTTGCTCCCCCCTTCCTCCTCATTTTCTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTCTCTTTCCTTTGCTCCCCCCTTCCTCCTCATTTTCTTTAT  800

seq1  CTCTTGTTCCCCTGCTTCCTTACCCACTATCTCAGGCTCCTCATCCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCCCCTGCTTCCTTACCCACTATCTCAGGCTCCTCATCCTTTT  850

seq1  CTGTGCATGTCTGTTACCTGTGGAGATTGTGAAAACAATGATTTGCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATGTCTGTTACCTGTGGAGATTGTGAAAACAATGATTTGCTCAT  900

seq1  ATCTGAGCCCTTTA-TTTGAGAGGCCTTGGTTGGAACTCAAAACTGTGTA  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCCCTTTATTTTGAGAGGCCTTGGTTGGAACTCAAAACTGTGTA  950

seq1  CTTCCAAAAAGTT-CTTTAGTGATAATAGTTTCTGCTGCACCAAGGACTA  998
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  CTTCCAAAAAGTTCCTTTAGTGATAATAG-TTCTGCTGCACCAAGGACTA  999

seq1  TACTTAAAGAGCCAGTTCTTTATCTGATGTGAT-GTTCA-GGTTCCTGCT  1046
      ||||||||||||||||||||||||||||||||| ||||| ||||||||||
seq2  TACTTAAAGAGCCAGTTCTTTATCTGATGTGATGGTTCAGGGTTCCTGCT  1049

seq1  TCCAAAATTAAATC-AATAAGA-CTTTAG-ATA-GAGC-TTAGAATTTGT  1091
      |||||| ||||||| ||||||| |||||| ||| |||| |||||  ||||
seq2  TCCAAATTTAAATCAAATAAGACCTTTAGAATAGGAGCTTTAGA--TTGT  1097

seq1  TTAGAAAA--TTG--CCTGTATT-GTCCTG---CATAATTTTGATCATC-  1132
      ||||||||  |||  |||||||| ||||||    ||| ||| ||||||| 
seq2  TTAGAAAAATTTGGCCCTGTATTGGTCCTGTGCAATATTTTGGATCATCA  1147

seq1  ATTCCAC-ATGATGGAAATTGGC-TTTACAAA  1162
      ||||||| ||||  | ||||||| ||||||||
seq2  ATTCCACAATGAATGGAATTGGCGTTTACAAA  1179

seq1: chr1_67487671_67488779
seq2: B6Ng01-288H15.g_69_1172 (reverse)

seq1  AACTGTAG-ACTGTCTCCCACAGAAACAGCCTGTTTGGGGCCAACCATTT  49
      |||||||| |||||||||   |||||||| ||||| |||| |||||||||
seq2  AACTGTAGAACTGTCTCCACAAGAAACAG-CTGTTCGGGG-CAACCATTT  48

seq1  CCTCCCTTACTGTTACAATTCCTAATTGGGCAG-AAATAAGACTTGGATA  98
      ||||| |||||||||| |||||||||  ||||| ||||||||||||||||
seq2  CCTCCTTTACTGTTAC-ATTCCTAAT--GGCAGAAAATAAGACTTGGATA  95

seq1  TTCTCTACAGTTCTTTTCTATCTTGGTACATTCCACACTTATTCTTGAGA  148
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTCTACAGTTCTTTTCTATCTTGGTACATTCCACACTTA-TCTTGAGA  144

seq1  ATTACAAGCAAGAAGTATTCAAGAACTGGGTGGGTCAAAGTATACCTTGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAGCAAGAAGTATTCAAGAACTGGGTGGGTCAAAGTATACCTTGA  194

seq1  ATACTAACCATTTATTTAATAGAACTAACCAGGTGGTTATTTATTGTATT  248
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATACTAACCATTTA-TTAATAGAACTAACCAGGTGGTTATTTATTGTATT  243

seq1  CTCCCTGTCGTTATAATCTCATGATAGAAATGTTTATCAAAATGTTCAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTCGTTATAATCTCATGATAGAAATGTTTATCAAAATGTTCAAT  293

seq1  TAGTCCAATTATTATTACTGCACCGTATTCCTTTGTCTTTTTTATGTACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAATTATTATTACTGCACCGTATTCCTTTGTCTTTTTTATGTACT  343

seq1  CTAATTTCTACCCACTTTTAACTACTTCCTTTTTAGCACAAGAGGTTCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCTACCCACTTTTAACTACTTCCTTTTTAGCACAAGAGGTTCCA  393

seq1  GACTCTTCTTATTTACATCATTTGTCTAATACCATATCAGCTATTTTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCTTATTTACATCATTTGTCTAATACCATATCAGCTATTTTTTG  443

seq1  AGGGTCATTGGTATACTTCATTTAAAACCATTTATAAATCAAGACTTAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCATTGGTATACTTCATTTAAAACCATTTATAAATCAAGACTTAGA  493

seq1  ATCATTTTAGAATTGTTCATGAATTGAATCTTTGTTATAAAAACAATTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTAGAATTGTTCATGAATTGAATCTTTGTTATAAAAACAATTTG  543

seq1  TTATAATGAAAGTCATTGTTATTTGTTCTTATTTTCTTTTCTGTTTAATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGAAAGTCATTGTTATTTGTTCTTATTTTCTTTTCTGTTTAATC  593

seq1  TCAACTCAGTATGTATGAACCAAATGTCAAGATGTCATTGAGTAAATGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCAGTATGTATGAACCAAATGTCAAGATGTCATTGAGTAAATGAA  643

seq1  TTAATAATCTTGCAAATTAATAATAAATAATAATAATAACATAAAATAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATCTTGCAAATTAATAATAAATAATAATAATAACATAAAATAAA  693

seq1  TTATATAAAGCCTGGTACAATTCTTGTTCATCTCCTTCACTTTTGAGGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAAGCCTGGTACAATTCTTGTTCATCTCCTTCACTTTTGAGGTG  743

seq1  AAATGTCAATTCTTCATGTGTCTAATTCACTGATAAGTTAGTGAAACTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAATTCTTCATGTGTCTAATTCACTGATAAGTTAGTGAAACTGT  793

seq1  GTAGGTCAAGCATGCCTTCAGAATCTTCTGCAATGAAGGCTTCAAAGCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCAAGCATGCCTTCAGAATCTTCTGCAATGAAGGCTTCAAAGCAG  843

seq1  AAAATAGGTCACAGACCCCAACTACCAGAAACCCTGGTAGGCTGCCTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGTCACAGACCCCAACTACCAGAAACCCTGGTAGGCTGCCTGCA  893

seq1  GACCTTCCCCCAGACACATCAATCTGTAGCAATAAAACAGAACACTAGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCCCCCAGACACATCAATCTGTAGCAATAAAACAGAACACTAGCT  943

seq1  GTGGAGAGCCGGTAAGTGCTGCGAGCAATCGCATGTGTGCCGCCAGTAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGCCGGTAAGTGCTGCGAGCAATCGCATGTGTGCCGCCAGTAAT  993

seq1  CTCTGAGGAGAGCCGTGTGTGCCGCGAGCAATCGCCATTATAAGATGGCG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGAGAGCCGTGTGTGCCGCGAGCAATCGCCATTATAAGATGGCG  1043

seq1  CGGGCCTCCGCTGTGCCCTAACTAGTAAACAAGCCTTGTACGCAGGTGCG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCTCCGCTGTGCCCTAACTAGTAAACAAGCCTTGTACGCAGGTGCG  1093

seq1  AGAGTGAATTC  1109
      |||||||||||
seq2  AGAGTGAATTC  1104