BAC Information

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BAC

Clone NameB6Ng01-289B07
Chromosome1 (Build37)
Map Location 27,301,436 - 27,302,596
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289B07.bB6Ng01-289B07.g
ACCGA086576GA086577
length9861,168
definitionB6Ng01-289B07.b B6Ng01-289B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagttacctgaaaaatt
gttcaacataatcatcaggtatatgcaaatcaaaacgaacctgagattcc
acctcataccagtcagaaaggctaagatcaaaaactcaggtgaaagtaga
tgctggcgaggatgtggagaaagatgaacactcctccattgttggtagga
ctgcaagcttgtacaaccactattgaaaccagtctggcggttcctcagaa
aattggacatagtactaccggaggaaccagcaatacctctcctgggcata
tatccagaagatgtttcaactggtaataacaacacatgctccactatgtt
catagcagccttatttataatagccagaaactagaaagaacccagatgtc
cctcaacagaggaatggatacaaaaatgtagtacatttacacaatggagt
actactcagctattaaaaacaatgaatttatgaaattcttaggcaaatgg
atgaatctggagggtatcatcctgagtgaagtaaccaaatcacaaaagaa
ctaacatgatatgcactcactgagaagtggatattagcccagaaacatag
aatacacaagatacaatttgcaaagcacatgaaactcaagaaggaagacc
aaagtgtggatactttgtccctccttggaatggggaacaaaatatccatg
gaaggagttacagagacaaaattggaactgagaggaaaggatggaccatc
cagagactgccccaccttgggatccatcccataatcagccaccaaatgca
gacactttttgcatatgctagcaagattttgctgaaagtaccctgatata
tctgtctctttttgaggctatggccagtgcctggcaatacagatgtggga
tgcttcattcgactggatggaacacaggggcccccattgggaggagctag
aagaaaagttccccaaggaagctgaagggaatctgc

gaattctttttgggttcagtttttcatcagagaactggtgtttgcttaaa
tttaaataaaattcacagtagagcaataaataaaacttggcatcttcata
attgatatttgggaaatcttacagtttatgacagatcaaaaattatactc
tgacatgctgtcaaattttttaaattagagaaaagtcatggagtttgaaa
catagcagtaggaagatacatacatatttgaagtacattgtatcttattt
ttatagtaatcataaaaacattagaaaatacaccatataatttattacag
tttcaaaaagtatttcctgataaactcttggcatgcttttaatggtaact
gttacaaacataacttagagatatttttcagattgtgaggtgtgatattg
gtcatctagaatcaacatgaaatgggcttatgcctcataatcaaactagg
cttattgctcctttgctttttaaaggcaaatacctcatatgtacttttca
ctcaacttcactgacattgtataaattagtttgacattgaaaattactga
tctatgtttttaaaatatgcattcctatatgcgctgtgtatacatgtctg
tgtaggcaagaggtctgtggtggatctggaagtttagcattttaagctgg
actggctggagagcaaattgcagtcatctaccagtatttgtctaccacac
cagcacagggataataagtatgagccacagtgactggcattttatatgga
cccagggatgctaatcaaggccttctgtttgagagtcccctttatgaact
gagttgtggcttaacccttgactgtctgcttcttttaaacatattcataa
aactacaaacaatttgtcatttattctttgcagtaaactgttttaagagg
ctggcttagcctatgttttaatataattgggcaagtgagagttatattta
gagttgttttcttgtgagtatgaatagcttttaggtacctaaacctgagc
acaggaacaatgagcattcagtagacttcttaggcaatagaagaaggagt
caaattacaaagcatgtctgcttgaagtcagtgactcttgaattatccac
tggaagcctcatttttccagaagaaatacacatgtatgtagaaacagcgt
gacattctagtaaaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27301436_27302596
seq2: B6Ng01-289B07.g_70_1237 (reverse)

seq1  CTCTTTTACT-GAATGTTCCACCCTGTTTCTTCCT-CATGTGTAT---CT  45
      |||||||||| ||||||  ||| |||||||| | | |||||||||    |
seq2  CTCTTTTACTAGAATGT--CACGCTGTTTCTACATACATGTGTATTTCTT  48

seq1  CTGG--AAATGAGACTCTCAGTGGATAA-TCCAGAGTCACTGACTTC-AG  91
      ||||  ||||||| ||  |||||||||| || ||||||||||||||| ||
seq2  CTGGAAAAATGAGGCTTCCAGTGGATAATTCAAGAGTCACTGACTTCAAG  98

seq1  CAGGACCATCCTTTGT-ATTTGACCTCCTTTCTTCTATTGCCT-AGAAGT  139
      |||   ||| |||||| |||||| |||| |||||||||||||| ||||||
seq2  CAG--ACATGCTTTGTAATTTGA-CTCC-TTCTTCTATTGCCTAAGAAGT  144

seq1  CTACTTGATGCTCATTGTTCTTGTGCCTCAGGTTTAGGTACCT-AAAGCT  188
      |||||  ||||||||||||| |||| ||||||||||||||||| ||||||
seq2  CTACTGAATGCTCATTGTTCCTGTG-CTCAGGTTTAGGTACCTAAAAGCT  193

seq1  ATTCATACTCACAAGAAAACAACTCT-AATATAACTCTCACTTGCCCAAT  237
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTCATACTCACAAGAAAACAACTCTAAATATAACTCTCACTTGCCCAAT  243

seq1  TATA-TAAAACATAGGCCTAAGCCAGCCTCTTAAAACAGTTTACTGCAAA  286
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATATTAAAACATAGG-CTAAGCCAGCCTCTTAAAACAGTTTACTGCAAA  292

seq1  GAATAAATGAC-AATTGTTTGTAGTTTTATGAATATGTTTAAAAGAAGCA  335
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGACAAATTGTTTGTAGTTTTATGAATATGTTTAAAAGAAGCA  342

seq1  GACAGTCAAGGGTTAAGCCACAACTCAGTTCATAAAGGGGACTCTCAAAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCAAGGGTTAAGCCACAACTCAGTTCATAAAGGGGACTCTCAAAC  392

seq1  AGAAGGCCTTGATTAGCATCCCTGGGTCCATATAAAATGCCAGTCACTGT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCCTTGATTAGCATCCCTGGGTCCATATAAAATGCCAGTCACTGT  442

seq1  GGCTCATACTTATTATCCCTGTGCTGGTGTGGTAGACAAATACTGGTAGA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATACTTATTATCCCTGTGCTGGTGTGGTAGACAAATACTGGTAGA  492

seq1  TGACTGCAATTTGCTCTCCAGCCAGTCCAGCTTAAAATGCTAAACTTCCA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCAATTTGCTCTCCAGCCAGTCCAGCTTAAAATGCTAAACTTCCA  542

seq1  GATCCACCACAGACCTCTTGCCTACACAGACATGTATACACAGCGCATAT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACCACAGACCTCTTGCCTACACAGACATGTATACACAGCGCATAT  592

seq1  AGGAATGCATATTTTAAAAACATAGATCAGTAATTTTCAATGTCAAACTA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCATATTTTAAAAACATAGATCAGTAATTTTCAATGTCAAACTA  642

seq1  ATTTATACAATGTCAGTGAAGTTGAGTGAAAAGTACATATGAGGTATTTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACAATGTCAGTGAAGTTGAGTGAAAAGTACATATGAGGTATTTG  692

seq1  CCTTTAAAAAGCAAAGGAGCAATAAGCCTAGTTTGATTATGAGGCATAAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAAGCAAAGGAGCAATAAGCCTAGTTTGATTATGAGGCATAAG  742

seq1  CCCATTTCATGTTGATTCTAGATGACCAATATCACACCTCACAATCTGAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCATGTTGATTCTAGATGACCAATATCACACCTCACAATCTGAA  792

seq1  AAATATCTCTAAGTTATGTTTGTAACAGTTACCATTAAAAGCATGCCAAG  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCTAAGTTATGTTTGTAACAGTTACCATTAAAAGCATGCCAAG  842

seq1  AGTTTATCAGGAAATACTTTTTGAAACTGTAATAAATTATATGGTGTATT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCAGGAAATACTTTTTGAAACTGTAATAAATTATATGGTGTATT  892

seq1  TTCTAATGTTTTTATGATTACTATAAAAATAAGATACAATGTACTTCAAA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGTTTTTATGATTACTATAAAAATAAGATACAATGTACTTCAAA  942

seq1  TATGTATGTATCTTCCTACTGCTATGTTTCAAACTCCATGACTTTTCTCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTATCTTCCTACTGCTATGTTTCAAACTCCATGACTTTTCTCT  992

seq1  AATTTAAAAAATTTGACAGCATGTCAGAGTATAATTTTTGATCTGTCATA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAAATTTGACAGCATGTCAGAGTATAATTTTTGATCTGTCATA  1042

seq1  AACTGTAAGATTTCCCAAATATCAATTATGAAGATGCCAAGTTTTATTTA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAGATTTCCCAAATATCAATTATGAAGATGCCAAGTTTTATTTA  1092

seq1  TTGCTCTACTGTGAATTTTATTTAAATTTAAGCAAACACCAGTTCTCTGA  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTACTGTGAATTTTATTTAAATTTAAGCAAACACCAGTTCTCTGA  1142

seq1  TGAAAAACTGAACCCAAAAAGAATTC  1161
      ||||||||||||||||||||||||||
seq2  TGAAAAACTGAACCCAAAAAGAATTC  1168


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