BAC Information

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BAC

Clone NameB6Ng01-289D11
Chromosome1 (Build37)
Map Location 92,271,159 - 92,368,048
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665688, Centg2, Gbx2, Asb18, Iqca, Cxcr7
Downstream geneCops8, Col6a3, Mlph, Prlh, Rab17, Lrrfip1, Gm817, LOC665766, Ramp1, Ube2f, LOC665783, Scly, Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289D11.bB6Ng01-289D11.g
ACCGA086678GA086679
length1,134103
definitionB6Ng01-289D11.b B6Ng01-289D11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,366,909 - 92,368,048)(92,271,159 - 92,271,261)
sequence
gaattcatttaagtgaagaagaagaagaagaaaaaagattgacttgggaa
aacataggagttaccctcatgcacaagctgggcggcactcagatgaccta
agtccgagggctcacggtggttctcggcctagctgtccaactctgggcaa
agcacaacaaagatgtgtctgctttggaggaaagcgtgcttctcagccaa
gttcaacaggaataatgtgacagaatataattaaagagcaagtaatttgt
cacagatgcaaattccataaaagttcaaagctgtgtgggctggagggcgt
taggggaggaggaggcggaggccaccgtagaattcttggcggcagacaca
ggtggggcagagaaaggaacgcatccagggactgtgggccaggagggggc
tggtgtggtgcaaatggatttgggtttttggggcagaatcccaggttggg
taacacttggggctaaggaatttgcagacaaattgaaggtaggaaatgag
gattctgcaccactgaacattagattccccaggatgcaggagccctccca
gggtcacttttggcagcaccacccagagtctgtggttgagcccatgccag
aggaagacagagcatccttggtagatgctgcgtcagtgtgaggctggggt
cctcggtcaaggcacgagtcggggagaagcttttccaggaccaagaagag
atagccctacgaaggcagagatgagcttactcatggcagacaatgaggga
gtcagagggccagcttctcctgcagccctcatacccagagaggcagtgag
aatgctgaaagctcgcaggagtggcttccttgaagagccccttgtggaga
tggctcttttgggtgggtacctggcagagctgaactttgcttcccctcct
tctgcaggagtccattgtgttgcccggctgggagtcgtgtgatggacacg
tttgcatctgggagggaagctgaacatccagagagactaagagaaaacac
accttgctgatgtcagcgtggggatggggcagggaaggctgaggaggcct
tccaggatagatccatgcacataggcaggatgcagagctctctcactggg
gcgaagaagcatgcctcctgcaacttctgtcttt

actcacatggcacgggagataagagatgaagggactgcttcatgcatgca
aatcaaacccacttgtattcctgaatataatgatggggggtgggggtagg
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_92366909_92368048
seq2: B6Ng01-289D11.b_43_1176 (reverse)

seq1  AAAGACAGAGGTTTGCAGGGAGCATGC-TCTTCGCCCCAGTTGAGAGAGC  49
      ||||||||| | |||||||  |||||| |||||||||||| |||||||||
seq2  AAAGACAGAAG-TTGCAGGAGGCATGCTTCTTCGCCCCAG-TGAGAGAGC  48

seq1  TCTGGCATCCTGGCCTATGTGCATGGATCCTTAATCCTGGAAGCCCTTCC  99
      ||| ||||||| |||||||||||||||||    |||||||||| || |||
seq2  TCT-GCATCCT-GCCTATGTGCATGGATC---TATCCTGGAAGGCC-TCC  92

seq1  TCAGCCCTTCCCTGCCCCTTCCCCACGCTGACATCAGC-AGGTGTGTTTT  148
      |||| ||||||||||||| ||||||||||||||||||| |||||||||||
seq2  TCAG-CCTTCCCTGCCCCATCCCCACGCTGACATCAGCAAGGTGTGTTTT  141

seq1  CTCTTAGTCTCTCTGGATGTTCAGCTTCCCT-CCAGATGCAAACGTGTCC  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTCTTAGTCTCTCTGGATGTTCAGCTTCCCTCCCAGATGCAAACGTGTCC  191

seq1  ATCACACGACTCCCAGCC-GGCAACACAATGGACTCCTGCAGAAGGAGGG  246
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCACACGACTCCCAGCCGGGCAACACAATGGACTCCTGCAGAAGGAGGG  241

seq1  GAAGCAAAGTTCAGCTCTGCCAGGTACCCACCCAAAAGAGCCATCTCCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAAGTTCAGCTCTGCCAGGTACCCACCCAAAAGAGCCATCTCCAC  291

seq1  AAGGGGGCTCTTCAAGGAAGCCACTCCTGCGAGCTTTCAGCATTCTCACT  346
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GGGGCTCTTCAAGGAAGCCACTCCTGCGAGCTTTCAGCATTCTCACT  340

seq1  GCCTCTCTGGGTATGAGGGCTGCAGGAGAAGCTGGCCCTCTGACTCCCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCTGGGTATGAGGGCTGCAGGAGAAGCTGGCCCTCTGACTCCCTC  390

seq1  ATTGTCTGCCATGAGTAAGCTCATCTCTGCCTTCGTAGGGCTATCTCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTGCCATGAGTAAGCTCATCTCTGCCTTCGTAGGGCTATCTCTTC  440

seq1  TTGGTCCTGGAAAAGCTTCTCCCCGACTCGTGCCTTGACCGAGGACCCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCTGGAAAAGCTTCTCCCCGACTCGTGCCTTGACCGAGGACCCCA  490

seq1  GCCTCACACTGACGCAGCATCTACCAAGGATGCTCTGTCTTCCTCTGGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACACTGACGCAGCATCTACCAAGGATGCTCTGTCTTCCTCTGGCA  540

seq1  TGGGCTCAACCACAGACTCTGGGTGGTGCTGCCAAAAGTGACCCTGGGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCAACCACAGACTCTGGGTGGTGCTGCCAAAAGTGACCCTGGGAG  590

seq1  GGCTCCTGCATCCTGGGGAATCTAATGTTCAGTGGTGCAGAATCCTCATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTGCATCCTGGGGAATCTAATGTTCAGTGGTGCAGAATCCTCATT  640

seq1  TCCTACCTTCAATTTGTCTGCAAATTCCTTAGCCCCAAGTGTTACCCAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTTCAATTTGTCTGCAAATTCCTTAGCCCCAAGTGTTACCCAAC  690

seq1  CTGGGATTCTGCCCCAAAAACCCAAATCCATTTGCACCACACCAGCCCCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTCTGCCCCAAAAACCCAAATCCATTTGCACCACACCAGCCCCC  740

seq1  TCCTGGCCCACAGTCCCTGGATGCGTTCCTTTCTCTGCCCCACCTGTGTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCACAGTCCCTGGATGCGTTCCTTTCTCTGCCCCACCTGTGTC  790

seq1  TGCCGCCAAGAATTCTACGGTGGCCTCCGCCTCCTCCTCCCCTAACGCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCCAAGAATTCTACGGTGGCCTCCGCCTCCTCCTCCCCTAACGCCC  840

seq1  TCCAGCCCACACAGCTTTGAACTTTTATGGAATTTGCATCTGTGACAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCACACAGCTTTGAACTTTTATGGAATTTGCATCTGTGACAAAT  890

seq1  TACTTGCTCTTTAATTATATTCTGTCACATTATTCCTGTTGAACTTGGCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCTCTTTAATTATATTCTGTCACATTATTCCTGTTGAACTTGGCT  940

seq1  GAGAAGCACGCTTTCCTCCAAAGCAGACACATCTTTGTTGTGCTTTGCCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACGCTTTCCTCCAAAGCAGACACATCTTTGTTGTGCTTTGCCC  990

seq1  AGAGTTGGACAGCTAGGCCGAGAACCACCGTGAGCCCTCGGACTTAGGTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGACAGCTAGGCCGAGAACCACCGTGAGCCCTCGGACTTAGGTC  1040

seq1  ATCTGAGTGCCGCCCAGCTTGTGCATGAGGGTAACTCCTATGTTTTCCCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTGCCGCCCAGCTTGTGCATGAGGGTAACTCCTATGTTTTCCCA  1090

seq1  AGTCAATCTTTTTTCTTCTTCTTCTTCTTCACTTAAATGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATCTTTTTTCTTCTTCTTCTTCTTCACTTAAATGAATTC  1134


seq1: chr1_92271159_92271261
seq2: B6Ng01-289D11.g_74_176

seq1  ACTCACATGGCACGGGAGATAAGAGATGAAGGGACTGCTTCATGCATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATGGCACGGGAGATAAGAGATGAAGGGACTGCTTCATGCATGCA  50

seq1  AATCAAACCCACTTGTATTCCTGAATATAATGATGGGGGGTGGGGGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACCCACTTGTATTCCTGAATATAATGATGGGGGGTGGGGGTAGG  100

seq1  GAG  103
      |||
seq2  GAG  103


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