BAC Information

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BAC

Clone NameB6Ng01-289F14
Chromosome1 (Build37)
Map Location 74,312,109 - 74,478,301
singlet/doubletdoublet
Overlap geneArpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1
Upstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra
Downstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289F14.bB6Ng01-289F14.g
ACCGA086777GA086778
length1,145154
definitionB6Ng01-289F14.b B6Ng01-289F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,477,173 - 74,478,301)(74,312,109 - 74,312,262)
sequence
gaattcacagcctcatatcccaagcctacatgctaaacatatctccaata
agtagcagagagactgaaggagtcacaatcatcctacctggaggactatt
cctcaccatgactgtgcttagagacggcaccatttcccccagggcaagca
ggccatggcttaagttcatcagcccacctaagcctttcatttaaagcatg
cagaacctggagctgaggagacggctcaaaggatagatacttgctgtgtg
agcgttaggcctgaagtttagatccccgtcacacaaaaaaacatgccgag
tccacctgtaatagcacaccccggaagcaaagacaggaatcccagaggca
ggcaagccactagaccagctgaaatggaaggctctggatttgcaaaatac
cctgcccaatcagggaagacattccatatcagcctctgacctccacacac
gaaagagcacacacaatgaaaaaacaaaaccacgcatgttcctaagagcc
aactcaaatggagccttgacatctgctaactttggttctagctttgattt
gtttgtttgtttgtttgttttgagtctcagtgtctctacctggtcatcct
gcctctgcctcctcagctgcctcctcggttctgcaattatagtcacgcac
cactatgccgagaaaaaaaatctgcattttaatatgctgcctcatgggtg
ctaaaaaatctgtttcactatgaaatggagtcagctgggcagtggtggca
cacgcctttaatcccagcacttgggaggcagaggcaggtggatttctgag
tttgaggccagcttggtctacggagtgagttccaggacagccagggctac
acagagaaaccctgcctttaaaaaacaaaaaaagaaaaagaaatggcatt
gtatgctacacagcaaggactttccacaagaaaagggaagagattggggg
tggcatataagaatgcaggatgtctcctaacatggtcagctcccaccgga
caggaccacctttcaggcatttcagagccaggcgtgccacttgtacttaa
cgtcagcaatctggctccaggtccccagaagtttcccagctcttgcctta
aggtcatcaatagaattggtgtttcttgccaaattaaagtacaca
caaggtcagtgagaaaccctgtttcaaaaaataagacgaagagccaagca
tggcagcacacgaatttaaccccaggactcacttggaaggcagaggcatg
gcttcagtgatttcttggttgttttggttttgtttggggtatgtggttgg
ttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_74477173_74478301
seq2: B6Ng01-289F14.b_49_1193 (reverse)

seq1  TGTGTACTTTA--TTTGCA--GAACACCAAATCCTATGATGACCTTAAGG  46
      |||||||||||  || |||   |||||||| ||   ||||||||||||||
seq2  TGTGTACTTTAATTTGGCAAGAAACACCAATTCTATTGATGACCTTAAGG  50

seq1  C-AGAGCTGGGAAAC-TCTGGGGA-CTGGAGCCAGATTGCTGACG-TAAG  92
      | ||||||||||||| |||||||| |||||||||||||||||||| ||||
seq2  CAAGAGCTGGGAAACTTCTGGGGACCTGGAGCCAGATTGCTGACGTTAAG  100

seq1  TAC-AGTGGCACGGCTGGCTCTGAATGGCCTG-AAGGTGGTCCTGT-CGG  139
      ||| ||||||||| |||||||||||  ||||| ||||||||||||| |||
seq2  TACAAGTGGCACGCCTGGCTCTGAAATGCCTGAAAGGTGGTCCTGTCCGG  150

seq1  TGGGAGCTGA-CATGTTAGGAGACAT-CTGCA-TCTTATATGCCA-CCCC  185
      |||||||||| ||||||||||||||| ||||| |||||||||||| ||||
seq2  TGGGAGCTGACCATGTTAGGAGACATCCTGCATTCTTATATGCCACCCCC  200

seq1  AATCTCTTCCCTTTTCTTGTGG-AAGTCCTTGCTGTGTAGCATACAATGC  234
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATCTCTTCCCTTTTCTTGTGGAAAGTCCTTGCTGTGTAGCATACAATGC  250

seq1  CATTTCTTTTTCTTTTTTTGTTTTTTAAAGGCAGGGTTTCTCTGTGTAGC  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTTTCTTTTTTTGTTTTTTAAAGGCAGGGTTTCTCTGTGTAGC  300

seq1  CCTGGCTGTCCTGGAACTCACTCCGTAGACCAAGCTGGCCTCAAACTCAG  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTCCGTAGACCAAGCTGGCCTCAAACTCAG  350

seq1  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCA  400

seq1  CCACTGCCCAGCTGACTCCATTTCATAGTGAAACAGATTTTTTAGCACCC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCCAGCTGACTCCATTTCATAGTGAAACAGATTTTTTAGCACCC  450

seq1  ATGAGGCAGCATATTAAAATGCAGATTTTTTTTCTCGGCATAGTGGTGCG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAGCATATTAAAATGCAGATTTTTTTTCTCGGCATAGTGGTGCG  500

seq1  TGACTATAATTGCAGAACCGAGGAGGCAGCTGAGGAGGCAGAGGCAGGAT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATAATTGCAGAACCGAGGAGGCAGCTGAGGAGGCAGAGGCAGGAT  550

seq1  GACCAGGTAGAGACACTGAGACTCAAAACAAACAAACAAACAAACAAATC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTAGAGACACTGAGACTCAAAACAAACAAACAAACAAACAAATC  600

seq1  AAAGCTAGAACCAAAGTTAGCAGATGTCAAGGCTCCATTTGAGTTGGCTC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGAACCAAAGTTAGCAGATGTCAAGGCTCCATTTGAGTTGGCTC  650

seq1  TTAGGAACATGCGTGGTTTTGTTTTTTCATTGTGTGTGCTCTTTCGTGTG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACATGCGTGGTTTTGTTTTTTCATTGTGTGTGCTCTTTCGTGTG  700

seq1  TGGAGGTCAGAGGCTGATATGGAATGTCTTCCCTGATTGGGCAGGGTATT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGAGGCTGATATGGAATGTCTTCCCTGATTGGGCAGGGTATT  750

seq1  TTGCAAATCCAGAGCCTTCCATTTCAGCTGGTCTAGTGGCTTGCCTGCCT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATCCAGAGCCTTCCATTTCAGCTGGTCTAGTGGCTTGCCTGCCT  800

seq1  CTGGGATTCCTGTCTTTGCTTCCGGGGTGTGCTATTACAGGTGGACTCGG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTCCTGTCTTTGCTTCCGGGGTGTGCTATTACAGGTGGACTCGG  850

seq1  CATGTTTTTTTGTGTGACGGGGATCTAAACTTCAGGCCTAACGCTCACAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTTTTGTGTGACGGGGATCTAAACTTCAGGCCTAACGCTCACAC  900

seq1  AGCAAGTATCTATCCTTTGAGCCGTCTCCTCAGCTCCAGGTTCTGCATGC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTATCTATCCTTTGAGCCGTCTCCTCAGCTCCAGGTTCTGCATGC  950

seq1  TTTAAATGAAAGGCTTAGGTGGGCTGATGAACTTAAGCCATGGCCTGCTT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGAAAGGCTTAGGTGGGCTGATGAACTTAAGCCATGGCCTGCTT  1000

seq1  GCCCTGGGGGAAATGGTGCCGTCTCTAAGCACAGTCATGGTGAGGAATAG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGGGAAATGGTGCCGTCTCTAAGCACAGTCATGGTGAGGAATAG  1050

seq1  TCCTCCAGGTAGGATGATTGTGACTCCTTCAGTCTCTCTGCTACTTATTG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGGTAGGATGATTGTGACTCCTTCAGTCTCTCTGCTACTTATTG  1100

seq1  GAGATATGTTTAGCATGTAGGCTTGGGATATGAGGCTGTGAATTC  1129
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATGTTTAGCATGTAGGCTTGGGATATGAGGCTGTGAATTC  1145

seq1: chr1_74312109_74312262
seq2: B6Ng01-289F14.g_73_226

seq1  CAAGGTCAGTGAGAAACCCTGTTTCAAAAAATAAGACGAAGAGCCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCAGTGAGAAACCCTGTTTCAAAAAATAAGACGAAGAGCCAAGCA  50

seq1  TGGCAGCACACGAATTTAACCCCAGGACTCACTTGGAAGGCAGAGGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCACACGAATTTAACCCCAGGACTCACTTGGAAGGCAGAGGCATG  100

seq1  GCTTCAGTGATTTCTTGGTTGTTTTGGTTTTGTTTGGGGTATGTGGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTGATTTCTTGGTTGTTTTGGTTTTGTTTGGGGTATGTGGTTGG  150

seq1  TTGG  154
      ||||
seq2  TTGG  154