BAC Information

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BAC

Clone NameB6Ng01-291L19
Chromosome1 (Build37)
Map Location 73,316,458 - 73,317,480
singlet/doubletsinglet
Overlap genenone
Upstream genePecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291L19.bB6Ng01-291L19.g
ACCGA088549GA088550
length1,0251,190
definitionB6Ng01-291L19.b B6Ng01-291L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctttctgttttgtctatttatcttctgggatccactggtaag
agcttttcagtttctctgtgtcctgggtcttatctgctttaaaaacaaac
cacaagcaaacaaatccccctaatcaaaacaaacaaacgaacaaacaaac
aaacaaacttgcccatatcaatcaatttttatttccttccttccttcctt
ccttccttccatacttccttccttccttccttccccctcccttccttcct
tttctttctttctttttttcttttcaatttttgtgttgaatgtgaatgtt
tgtatccatgcctaatatacctttctttacctaaaagtaaaataagaggt
agacccagttttggggtggaatatagctgtgaacttgtacactacaatcc
ctaaagttaccgagtcctttagctgagctcctctaaacccactgagcaaa
ctaagatactcgtgacttagaaatatttacgttacatccctctggttgta
agctaggtctctttaagtatttgtgagcttgcctacgctctctcctttat
tctttctctcttccatccgaccactgtgcatttctctttttccttcccaa
ctgtgagtaatccaggagaaaaaatcatgtatgtgagtgggtatcatgga
ccctcccaaatttaaaaacaaaaagatttactagttcccttacacatttt
ttttaagactaagggagagtttaaaaaaatgaagcaaaggatgaagggaa
cgaagaaggaagaaaacaaaagaggatgaagatgagctggggcattgggt
gatgtagagaaaacaccatatatcacccagatgttgtctacagtgcccaa
acatcaggctttgggggagacaatcggaagacacaatgcttctttcatgg
cagactacttgctcacagccccatggcctctctccctgtggagtgtgtca
tccctttcaaacctttttggggtcaagttataaaggcttgttagtaggtg
tggatgacgtcccactgtaccacaa
gaattcaataactcacttcaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cactggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctatggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaagccaata
caaggacgggaaccacgccctagaaaaaaacaagaagatattccctcaac
aaacctaaaaagaagaacagccacaaggaacagaatgccaacttacacaa
aaataacagagcaacattacttctatatctctaatatcaatggaactcat
cccattaaggactagactaacgactgctaccaacagactacatcctgtct
gcctacagggaaaccccatctctctcaggtaaaaagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73316458_73317480
seq2: B6Ng01-291L19.b_49_1073

seq1  GAATTCTCCTTTCTGTTTTGTCTATTTATCTTCTGGGATCCACTGGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTCTGTTTTGTCTATTTATCTTCTGGGATCCACTGGTAAG  50

seq1  AGCTTTTCAGTTTCTCTGTGTCCTGGGTCTTATCTGCTTTAAAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCAGTTTCTCTGTGTCCTGGGTCTTATCTGCTTTAAAAACAAAC  100

seq1  CACAAGCAAACAAATCCCCCTAATCAAAACAAACAAACGAACAAACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCAAACAAATCCCCCTAATCAAAACAAACAAACGAACAAACAAAC  150

seq1  AAACAAACTTGCCCATATCAATCAATTTTTATTTCCTTCCTTCCTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTTGCCCATATCAATCAATTTTTATTTCCTTCCTTCCTTCCTT  200

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCCCTCCCTTCCTTCCT  250
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCATACTTCCTTCCTTCCTTCCTTCCCCCTCCCTTCCTTCCT  250

seq1  TTTCTTTCTTTCTTTTTTTCTTTTCAATTTTTGTGTTGAATGTGAATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTTTTTCTTTTCAATTTTTGTGTTGAATGTGAATGTT  300

seq1  TGTATCCATGCCTAATATACCTTTCTTTACCTAAAAGTAAAATAAGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCATGCCTAATATACCTTTCTTTACCTAAAAGTAAAATAAGAGGT  350

seq1  AGACCCAGTTTTGGGGTGGAATATAGCTGTGAACTTGTACACTACAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGTTTTGGGGTGGAATATAGCTGTGAACTTGTACACTACAATCC  400

seq1  CTAAAGTTACCGAGTCCTTTAGCTGAGCTCCTCTAAACCCACTGAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTTACCGAGTCCTTTAGCTGAGCTCCTCTAAACCCACTGAGCAAA  450

seq1  CTAAGATACTCGTGACTTAGAAATATTTACGTTACATCCCTCTGGTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATACTCGTGACTTAGAAATATTTACGTTACATCCCTCTGGTTGTA  500

seq1  AGCTAGGTCTCTTTAAGTATTTGTGAGCTTGCCTACGCTCTCTCCTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGTCTCTTTAAGTATTTGTGAGCTTGCCTACGCTCTCTCCTTTAT  550

seq1  TCTTTCTCTCTTCCATCCGACCACTGTGCATTTCTCTTTTTCCTTCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTCTTCCATCCGACCACTGTGCATTTCTCTTTTTCCTTCCCAA  600

seq1  CTGTGAGTAATCCAGGAGAAAAAATCATGTATGTGAGTGGGTATCATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTAATCCAGGAGAAAAAATCATGTATGTGAGTGGGTATCATGGA  650

seq1  CCCTCCCAAATTTAAAAACAAAAAGATTTACTAGTTCCCTTACACATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCAAATTTAAAAACAAAAAGATTTACTAGTTCCCTTACACATTTT  700

seq1  TTTTAAGACTAAGGGAGAGTTTAAAAAAATGAAGCAAAGGATGAAGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGACTAAGGGAGAGTTTAAAAAAATGAAGCAAAGGATGAAGGGAA  750

seq1  CGAAGAAGGAAGAAAACAAAAGAGGATGAAGATGAGCTGGGGCATTGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAAGGAAGAAAACAAAAGAGGATGAAGATGAGCTGGGGCATTGGGT  800

seq1  GATGTAGAGAAAACACCATATATCACCCAGATGTTTGTCTACAGTGCCCA  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GATGTAGAGAAAACACCATATATCACCCAGATG-TTGTCTACAGTGCCCA  849

seq1  AACATCAGGCTTT-GGGGAGACAATCGGAAGACACAATGCTTCTTTCAGG  899
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  AACATCAGGCTTTGGGGGAGACAATCGGAAGACACAATGCTTCTTTCATG  899

seq1  GCAGACAAC-TGCTCACAGCCCCATGGCCTCTCTCCCTGT-GAGTGTGTC  947
      |||||| || |||||||||||||||||||||||||||||| |||||||||
seq2  GCAGACTACTTGCTCACAGCCCCATGGCCTCTCTCCCTGTGGAGTGTGTC  949

seq1  TATCCCTTTCAAACCTTTTTGTGGTCAAGTTATAAAGGCCTGTTTAGTAG  997
       |||||||||||||||||||| ||||||||||||||||| || |||||||
seq2  -ATCCCTTTCAAACCTTTTTGGGGTCAAGTTATAAAGGCTTG-TTAGTAG  997

seq1  GTG-GGATGACGTCACACTG-ACCACAA  1023
      ||| |||||||||| ||||| |||||||
seq2  GTGTGGATGACGTCCCACTGTACCACAA  1025