MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-294D20
Chromosome	1 (Build37)
Map Location	34,728,933 - 34,862,401
singlet/doublet	doublet
Overlap gene	Arhgef4
Upstream gene	Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik, Dst, LOC100040913, LOC383629, LOC100040938, Ccdc115, Imp4, Ptpn18, Tesp1, Cfc1, Tesp2, 9430069J07Rik, AA619741
Downstream gene	BC043098, Plekhb2, LOC666261
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rab23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19335 MGI:99833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bag2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213539 MGI:1891254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp451 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98403 MGI:2137896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000022109 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 151 ESTs, 11 Proteins

name	B230209C24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320705 MGI:2444572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dst (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13518 MGI:104627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040913 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs

name	LOC383629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100040938 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Ccdc115 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69668 MGI:1916918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Imp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27993 MGI:106572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptpn18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19253 MGI:108410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21755 MGI:1270856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cfc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12627 MGI:109448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21756 MGI:1270857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9430069J07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211383 MGI:3026939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA619741 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241051 MGI:3035322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins

name	Arhgef4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226970 MGI:2442507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC043098 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214469 MGI:2448487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226971 MGI:2385825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666261 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Rab23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377153 GeneID:19335 MGI:99833
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB23, member RAS oncogene family transcript_id : NM_008999.3

name	Bag2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110031 GeneID:213539 MGI:1891254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl2-associated athanogene 2 transcript_id : NM_145392.2

name	Zfp451 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370012 GeneID:98403 MGI:2137896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 451 transcript_id : NM_133817.2

name	OTTMUSG00000022109 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363253 GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000022109, transcript variant 4 transcript_id : XM_897987.2

name	OTTMUSG00000022109 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363252 GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000022109, transcript variant 3 transcript_id : XM_897976.2

name	B230209C24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254313 GeneID:320705 MGI:2444572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230209C24 gene transcript_id : NM_177235.3

name	Dst (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154075 GeneID:13518 MGI:104627
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dystonin transcript_id : NM_134448.2

name	Dst (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154081 GeneID:13518 MGI:104627
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dystonin transcript_id : NM_133833.2

name	LOC100040913 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233785 GeneID:100040913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs product : hypothetical protein LOC100040913 transcript_id : XM_001475478.1

name	LOC100040938 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233787 GeneID:100040938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040938 transcript_id : XM_001475521.1

name	Ccdc115 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037168 GeneID:69668 MGI:1916918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 115 transcript_id : NM_027159.1

name	Imp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340630 GeneID:27993 MGI:106572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) transcript_id : NM_178601.2

name	Ptpn18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199760 GeneID:19253 MGI:108410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 18 transcript_id : NM_011206.2

name	Tesp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130424 GeneID:21755 MGI:1270856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testicular serine protease 1 transcript_id : NM_009355.2

name	Cfc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366288 GeneID:12627 MGI:109448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cripto, FRL-1, cryptic family 1 transcript_id : NM_007685.2

name	Tesp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112734837 GeneID:21756 MGI:1270857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testicular serine protease 2 transcript_id : NM_009356.2

name	9430069J07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47523375 GeneID:211383 MGI:3026939
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9430069J07 gene transcript_id : NM_213727.1

name	AA619741 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363281 GeneID:241051 MGI:3035322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins product : expressed sequence AA619741 transcript_id : XM_915584.2

name	Arhgef4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56699447 GeneID:226970 MGI:2442507
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho guanine nucleotide exchange factor (GEF) 4 transcript_id : NM_183019.2

name	BC043098 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239369 GeneID:214469 MGI:2448487
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC043098 transcript_id : NM_174997.1

name	Plekhb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637809 GeneID:226971 MGI:2385825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family B (evectins) member 2 transcript_id : NM_145516.2

name	Rab23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543565 GeneID:19335 MGI:99833
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI] [Evidence IMP]; GO:0042733 - embryonic digit morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence IMP]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : open brain 2 product : RAB23, member RAS oncogene family protein_id : NP_033025.2

name	Bag2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703784 CCDS:CCDS14864.1 GeneID:213539 MGI:1891254
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0030188 - chaperone regulator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0019538 - protein metabolism [Evidence ISS] codon_start : 1 product : Bcl2-associated athanogene 2 protein_id : NP_663367.1

name	Zfp451 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789329 CCDS:CCDS14865.1 GeneID:98403 MGI:2137896
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 451 protein_id : NP_598578.1

name	OTTMUSG00000022109 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878798 GeneID:433287 MGI:3705563
definition	codon_start : 1 product : similar to RNA binding motif protein 10 isoform 4 protein_id : XP_903080.1

name	OTTMUSG00000022109 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878796 GeneID:433287 MGI:3705563
definition	codon_start : 1 product : similar to RNA binding motif protein 10 isoform 3 protein_id : XP_903069.1

name	B230209C24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254314 GeneID:320705 MGI:2444572
definition	codon_start : 1 product : hypothetical protein LOC320705 protein_id : NP_796209.2

name	Dst (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154076 GeneID:13518 MGI:104627
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030056 - hemidesmosome [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA]; GO:0045104 - intermediate filament cytoskeleton organization and biogenesis [Evidence ISS]; GO:0008090 - retrograde axon cargo transport [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant b; bullous pemphigoid antigen 1; dystonia musculorum product : dystonin isoform b protein_id : NP_604443.2

name	Dst (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154082 GeneID:13518 MGI:104627
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030056 - hemidesmosome [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA]; GO:0045104 - intermediate filament cytoskeleton organization and biogenesis [Evidence ISS]; GO:0008090 - retrograde axon cargo transport [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant a; bullous pemphigoid antigen 1; dystonia musculorum product : dystonin isoform a protein_id : NP_598594.2

name	LOC100040913 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233786 GeneID:100040913
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475528.1

name	LOC100040938 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233788 GeneID:100040938
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475571.1

name	Ccdc115 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037169 CCDS:CCDS14866.1 GeneID:69668 MGI:1916918
definition	GO_component : GO:0005764 - lysosome [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : coiled-coil domain containing 115 protein_id : NP_081435.1

name	Imp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519917 GeneID:27993 MGI:106572
definition	GO_component : GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence ISS]; GO:0030519 - snoRNP binding [Evidence ISS] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence TAS] codon_start : 1 exception : mismatches in translation product : U3 snoRNP protein 4 homolog protein_id : NP_848716.1

name	Ptpn18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199761 CCDS:CCDS14867.1 GeneID:19253 MGI:108410
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004726 - non-membrane spanning protein tyrosine phosphatase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] codon_start : 1 product : protein tyrosine phosphatase, non-receptor type 18 protein_id : NP_035336.2

name	Tesp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678293 CCDS:CCDS14868.1 GeneID:21755 MGI:1270856
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 product : testicular serine protease 1 protein_id : NP_033381.1

name	Cfc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671742 CCDS:CCDS14869.1 GeneID:12627 MGI:109448
definition	GO_process : GO:0007275 - development [Evidence IEA]; GO:0007369 - gastrulation [Evidence IEA] codon_start : 1 product : cripto, FRL-1, cryptic family 1 protein_id : NP_031711.1

name	Tesp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112734838 CCDS:CCDS14870.1 GeneID:21756 MGI:1270857
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 product : testicular serine protease 2 protein_id : NP_033382.2

name	9430069J07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47523376 CCDS:CCDS14871.1 GeneID:211383 MGI:3026939
definition	codon_start : 1 product : hypothetical protein LOC211383 protein_id : NP_998892.1

name	AA619741 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363282 GeneID:241051 MGI:3035322
definition	codon_start : 1 product : hypothetical protein protein_id : XP_920677.2

name	Arhgef4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56699448 CCDS:CCDS14872.1 GeneID:226970 MGI:2442507
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : APC-stimulated guanine nucleotide exchange factor product : Rho guanine nucleotide exchange factor 4 protein_id : NP_898840.2

name	BC043098 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239370 CCDS:CCDS14873.1 GeneID:214469 MGI:2448487
definition	codon_start : 1 product : hypothetical protein LOC214469 protein_id : NP_778162.1

name	Plekhb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704016 CCDS:CCDS14874.1 GeneID:226971 MGI:2385825
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : evectin-2; pleckstrin homology domain-containing product : pleckstrin homology domain containing, family B (evectins) member 2 protein_id : NP_663491.1

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 1 pseudo : _no_value

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 2 pseudo : _no_value

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 3 pseudo : _no_value

name	LOC666261 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666261
definition	number : 1 pseudo : _no_value

name	LOC666261 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666261
definition	number : 2 pseudo : _no_value

name	LOC666261 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666261
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:178372
definition	standard_name : AW545388

name	(CDS detail)
type	STS
link
xref	UniSTS:234100
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178371
definition	standard_name : AI596398

name	(CDS detail)
type	STS
link
xref	UniSTS:128676
definition	standard_name : D1Mit318

name	(CDS detail)
type	STS
link
xref	UniSTS:234098
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234099
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123887
definition	standard_name : 30.MHAa96c6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:258462
definition	standard_name : px-8a1

name	(CDS detail)
type	STS
link
xref	UniSTS:234101
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:247835
definition	standard_name : BF405229

name	(CDS detail)
type	STS
link
xref	UniSTS:178373
definition	standard_name : AW554249

name	(CDS detail)
type	STS
link
xref	UniSTS:142284
definition	standard_name : RH125719

name	(CDS detail)
type	STS
link
xref	UniSTS:161723
definition	standard_name : RH124901

name	(CDS detail)
type	STS
link
xref	UniSTS:167274
definition	standard_name : C86466

name	(CDS detail)
type	STS
link
xref	UniSTS:178368
definition	standard_name : AI427118

name	(CDS detail)
type	STS
link
xref	UniSTS:144301
definition	standard_name : Ptpn18

name	(CDS detail)
type	STS
link
xref	UniSTS:163245
definition	standard_name : U52523

name	(CDS detail)
type	STS
link
xref	UniSTS:178369
definition	standard_name : AV265756

name	(CDS detail)
type	STS
link
xref	UniSTS:234102
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234376
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234104
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234106
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128931
definition	standard_name : D1Mit72

name	(CDS detail)
type	STS
link
xref	UniSTS:492533
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234105
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210061
definition	standard_name : RH136066

name	(CDS detail)
type	STS
link
xref	UniSTS:158783
definition	standard_name : AU018239

name	(CDS detail)
type	STS
link
xref	UniSTS:128454
definition	standard_name : D1Mit121

name	(CDS detail)
type	STS
link
xref	UniSTS:128587
definition	standard_name : D1Mit243

name	(CDS detail)
type	STS
link
xref	UniSTS:122520
definition	standard_name : d9rat157

name	(CDS detail)
type	STS
link
xref	UniSTS:128930
definition	standard_name : D1Mit71

name	(CDS detail)
type	STS
link
xref	UniSTS:131148
definition	standard_name : D7Mit252.1

name	(CDS detail)
type	STS
link
xref	UniSTS:131147
definition	standard_name : MT2785

name	(CDS detail)
type	STS
link
xref	UniSTS:125327
definition	standard_name : MHAa78e6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122839
definition	standard_name : 05.MMHAP9FLB2.seq

clone name	MSMg01-447I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171O21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262F17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-529D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-176L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-294D20.b	B6Ng01-294D20.g
ACC	GA090419	GA090420
length	1,108	369
definition	B6Ng01-294D20.b	B6Ng01-294D20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(34,861,297 - 34,862,401)	(34,728,933 - 34,729,307)
sequence	gaattctctccctctgcctgacctttgggagtctgaatcaagagttcttt ggtgaccagatgcagcctaagattggaactggtcatttgttctcttgggt ataatcacgctgtctatgcctcctcccatatttctacccctcagggctgt gtgtgttccacggttcccacagtctagcttagtgatgcattaaagtggtc gaattctgaagcatcatattcttacatttctgatctgctcttctctgtgg ccctagagggctggcaagcaggggattgaatgtctgtgccacagttctga tcctatacccatctggttggaggcaaacagagagggtgcggtccaccccc catgcctgggactgcagcgctgtttggggcccagacttctgagcagagcc aagagtcttcaatccacccccacccccacccccaccctaggaaagtacag actggagccgtacccgtacaaagctggcagggaaccacccctcgccatct gccactcggccccaccaccattccctgttggtggcatccatcacttcgat gacatccccagctttgaagcccagctcctggtcatccatggtgacatggt cccacagggcttcagcacacaccacactgccatcactgatgagctgtaga gagagagtgtcaaggccagtaggtcagtgaggcagggctaccctactcta ctccatacccagcagccctagaaagggatcctggcctgctttacagagaa atgaatgaagtttccctccaggccagcagctcttctggacgcagggctat gcctaaagcatgcctagactgtttgaagctcaatgagagaacacaaaatg ggactgactgtcatgggccccttctctgttcagccacaccttcagcttgg ttgagtttatggcttcagcttcaacgtcctacccctgagatgttaggcta ggactgggacatggccaattggcagctactacctgctctcctaggcagcc atttaagggggaggaggatggagtccgctccctctgcaggatcttgtgac ttgcatggcttgtgagtcattcaggttaacagtgctgcatgcaatgaaca gtgcccac	tcagctgagagaaaagaactgcaactctcagagctggtgctattgagtca gagcagtttttcaggccctgctgaaattctcagcctcgagaaagaggaga gagaaatctcacccaagggaaagggtcttaaaacgaggggtagctctgaa ttcaagaaatttcctctgggaccatgcagatggtcactctgaccaaaggg aaatgagagcttaccagatctgggttagcaagcatggatctcttgttgtg gctaaggtgggctgcaaacctgcagagtttctagatccaagtcacgatgc accaatgttgtgaccataaaaagagaaagagctataagaatatgctctgg catggtgtggggggagggg
quality values	Open. Hide. 58 26 35 26 58 58 58 58 58 58 58 58 58 58 62 62 62 62 62 62 47 42 62 62 62 62 54 62 62 43 42 56 56 56 32 37 50 56 47 56 44 56 62 62 62 62 62 62 62 62 62 59 62 62 59 44 59 59 62 59 62 62 62 62 62 62 62 46 62 62 62 59 59 62 62 62 62 62 59 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 49 43 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 62 37 37 38 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 54 62 62 56 62 56 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 52 52 52 47 52 48 62 62 54 62 47 62 58 58 58 54 58 54 54 58 58 58 58 58 58 58 54 52 58 58 54 58 52 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 45 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 54 58 54 58 58 54 52 54 52 54 58 58 52 58 58 54 58 58 52 51 58 52 58 42 41 58 58 48 49 54 51 46 41 58 58 53 58 58 58 58 37 58 46 58 51 52 52 51 50 58 58 58 50 54 58 58 58 58 51 58 58 52 58 58 53 51 51 58 53 53 58 53 58 39 49 53 42 53 51 41 40 51 58 58 52 58 37 37 40 51 58 58 51 58 58 50 34 53 52 37 38 49 48 58 53 53 33 52 53 53 52 52 50 37 44 46 52 50 39 50 50 51 50 51 39 58 53 52 53 53 51 39 42 49 58 28 52 47 49 41 54 34 53 39 46 53 53 50 52 41 32 29 29 52 53 37 51 54 42 53 39 41 52 34 26 51 38 53 53 37 45 45 52 30 54 31 39 19 49 42 37 51 31 35 54 51 38 40 47 49 52 39 42 49 39 32 42 30 42 39 35 51 35 42 37 44 45 33 52 47 46 42 37 29 32 54 20 26 54 22 37 31 28 51 40 47 42 30 37 32 53 29 51 52 46 37 35 37 30 51 19 51 51 41 29 37 35 39 31 32 39 34 29 42 53 45 31 52 40 40 30 28 21 33 46 32 33 32 32 36 31 15 40 31 39 53 40 34 34 32 34 34 33 29 34 16 9 49 31 37 43 25 31 31 42 33 31 11 51 8 10 14 13 24 36 31 41 31 31 13 9 20 33 42 10 51 10 15 25 32 22 37 42 32 36 32 32 42 38 17 43 26 32 29 26 18 31 14 46 46 21 18 41 46 42 32 22 31 31 30 20 36 43 32 38 18 36 20 47 20 46 46 46 31 25 35 31 31 31 21 26 17 27 31 26 18 30 39 22 36 31 32 25 27 29 31 33 35 34 28 17 31 21 9 21 32 33 11 15 47 16 26 28 31 35 19 29 37 26 21 24 31 21 29 33 20 26 31 22 28 48 34 32 10 6 41 48 24 16 18 33 22 33 20 38 25 25 23 21 21 11 10 9 15 20 31 19 27 42 48 8 21 16 13 18 12 28 6 6 27 23 32 37 17 25 21 28 19 32 31 31 34 32 32 17 37 34 33 32 18 14 10 8 33 12 15 13 21 21 32 19 11 15 12 23 48 26 31 19 6 27 24 31 19 31 8 7 22 11 12 30 12 25 11 27 11 28 12 6 3 7 19 18 40 19 19 18 24 28 19 26 16 14 28 27 18 7 11 28 17 20 3 4 4 11 11 16 9 13 12 18 11 11 5 9 8 10 21 30 7 24 20 15 7 30 7 4 5 14 7 28 24 20 13 10 7 9 14 11 20 16 13 21 4 3 3 12 20 11 6 15 5 7 13 16 21 9 30 16 5 6	Open. Hide. 62 47 44 56 62 43 35 35 15 24 22 24 28 45 51 51 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 49 59 51 46 56 56 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 21 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_34861297_34862401
seq2: B6Ng01-294D20.b_48_1155 (reverse)

seq1  GTGGGCACTG-TCATTGGCAATGCAGCACTGTTAA-CTGGATGACCTCAC  48
      |||||||||| ||||||   ||||||||||||||| ||| |||| |||||
seq2  GTGGGCACTGTTCATTG--CATGCAGCACTGTTAACCTGAATGA-CTCAC  47

seq1  AAGCCATGCAAGTCCACAAGATCCTGCAGAGGGAGC-GACTCCATCCTCC  97
      ||||||||||||| |||||||||||||||||||||| |||||||||||||
seq2  AAGCCATGCAAGT-CACAAGATCCTGCAGAGGGAGCGGACTCCATCCTCC  96

seq1  TCCCCCTTTAAATGGCTGCCTAGGAGAGCAGGTAGTAGCTGCCAATT-GC  146
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCCCC-TTAAATGGCTGCCTAGGAGAGCAGGTAGTAGCTGCCAATTGGC  145

seq1  CATGTCCCAGTCCTAGCCTAACATCTCA-GGGTAGGACGTTGAAGCTGAA  195
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGTCCCAGTCCTAGCCTAACATCTCAGGGGTAGGACGTTGAAGCTGAA  195

seq1  GCCATAAACTCAACCAAGCTGAAGGTGTGGCTGAACAGAGAAGGGG-CCA  244
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCATAAACTCAACCAAGCTGAAGGTGTGGCTGAACAGAGAAGGGGCCCA  245

seq1  TGACAGTCAGTCCCATTTTGTGTTCTCTCATTGAGCTTC-AACAGTCTAG  293
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGACAGTCAGTCCCATTTTGTGTTCTCTCATTGAGCTTCAAACAGTCTAG  295

seq1  GCATGCCTTAGGCATAGCCCTGCGTCCAGAAGAGCTGCTGGCCTGGAGGG  343
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTTAGGCATAGCCCTGCGTCCAGAAGAGCTGCTGGCCTGGAGGG  345

seq1  AAACTTCATTCATTTCTCTGTAAAGCAGGCCAGGATCCC-TTCTAGGGCT  392
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAACTTCATTCATTTCTCTGTAAAGCAGGCCAGGATCCCTTTCTAGGGCT  395

seq1  GCTGGGTATGGAGTAGAGTAGGGTAGCCCTGCCTCACTGACCTACTGGCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTATGGAGTAGAGTAGGGTAGCCCTGCCTCACTGACCTACTGGCC  445

seq1  TTGACACTCTCTCTCTACAGCTCATCAGTGATGGCAGTGTGGTGTGTGCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACTCTCTCTCTACAGCTCATCAGTGATGGCAGTGTGGTGTGTGCT  495

seq1  GAAGCCCTGTGGGACCATGTCACCATGGATGACCAGGAGCTGGGCTTCAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTGTGGGACCATGTCACCATGGATGACCAGGAGCTGGGCTTCAA  545

seq1  AGCTGGGGATGTCATCGAAGTGATGGATGCCACCAACAGGGAATGGTGGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGATGTCATCGAAGTGATGGATGCCACCAACAGGGAATGGTGGT  595

seq1  GGGGCCGAGTGGCAGATGGCGAGGGGTGGTTCCCTGCCAGCTTTGTACGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCGAGTGGCAGATGGCGAGGGGTGGTTCCCTGCCAGCTTTGTACGG  645

seq1  GTACGGCTCCAGTCTGTACTTTCCTAGGGTGGGGGTGGGGGTGGGGGTGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGCTCCAGTCTGTACTTTCCTAGGGTGGGGGTGGGGGTGGGGGTGG  695

seq1  ATTGAAGACTCTTGGCTCTGCTCAGAAGTCTGGGCCCCAAACAGCGCTGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGACTCTTGGCTCTGCTCAGAAGTCTGGGCCCCAAACAGCGCTGC  745

seq1  AGTCCCAGGCATGGGGGGTGGACCGCACCCTCTCTGTTTGCCTCCAACCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGGCATGGGGGGTGGACCGCACCCTCTCTGTTTGCCTCCAACCA  795

seq1  GATGGGTATAGGATCAGAACTGTGGCACAGACATTCAATCCCCTGCTTGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTATAGGATCAGAACTGTGGCACAGACATTCAATCCCCTGCTTGC  845

seq1  CAGCCCTCTAGGGCCACAGAGAAGAGCAGATCAGAAATGTAAGAATATGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTCTAGGGCCACAGAGAAGAGCAGATCAGAAATGTAAGAATATGA  895

seq1  TGCTTCAGAATTCGACCACTTTAATGCATCACTAAGCTAGACTGTGGGAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGAATTCGACCACTTTAATGCATCACTAAGCTAGACTGTGGGAA  945

seq1  CCGTGGAACACACACAGCCCTGAGGGGTAGAAATATGGGAGGAGGCATAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGAACACACACAGCCCTGAGGGGTAGAAATATGGGAGGAGGCATAG  995

seq1  ACAGCGTGATTATACCCAAGAGAACAAATGACCAGTTCCAATCTTAGGCT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTGATTATACCCAAGAGAACAAATGACCAGTTCCAATCTTAGGCT  1045

seq1  GCATCTGGTCACCAAAGAACTCTTGATTCAGACTCCCAAAGGTCAGGCAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGTCACCAAAGAACTCTTGATTCAGACTCCCAAAGGTCAGGCAG  1095

seq1  AGGGAGAGAATTC  1105
      |||||||||||||
seq2  AGGGAGAGAATTC  1108

seq1: chr1_34728933_34729307
seq2: B6Ng01-294D20.g_68_442

seq1  GAATTCTCAGCTGAGAGAAAAGAACTGCAACTCTCAGAGCTGGTGCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTGAGAGAAAAGAACTGCAACTCTCAGAGCTGGTGCTATT  50

seq1  GAGTCAGAGCAGTTTTTCAGGCCCTGCTGAAATTCTCAGCCTCGAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGCAGTTTTTCAGGCCCTGCTGAAATTCTCAGCCTCGAGAAAG  100

seq1  AGGAGAGAGAAATCTCACCCAAGGGAAAGGGTCTTAAAACGAGGGGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGAAATCTCACCCAAGGGAAAGGGTCTTAAAACGAGGGGTAGC  150

seq1  TCTGAATTCAAGAAATTTCCTCTGGGACCATGCAGATGGTCACTCTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTCAAGAAATTTCCTCTGGGACCATGCAGATGGTCACTCTGACC  200

seq1  AAAGGGAAATGAGAGCTTACCAGATCTGGGTTAGCAAGCATGGATCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAATGAGAGCTTACCAGATCTGGGTTAGCAAGCATGGATCTCTT  250

seq1  GTTGTGGCTAAGGTGGGCTGCAAACCTGCAGAGTTTCTAGATCCAAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGCTAAGGTGGGCTGCAAACCTGCAGAGTTTCTAGATCCAAGTCA  300

seq1  CGATGCACCAATGTTGTGACCATAAAAAGAGAAAGAGCTATAAGAATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCACCAATGTTGTGACCATAAAAAGAGAAAGAGCTATAAGAATATG  350

seq1  CTCTGGCATGGTGTGGGGGGAGGGG  375
      |||||||||||||||||||||||||
seq2  CTCTGGCATGGTGTGGGGGGAGGGG  375

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information