BAC Information

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BAC

Clone NameB6Ng01-294M02
Chromosome1 (Build37)
Map Location 69,506,369 - 69,507,423
singlet/doubletsinglet
Overlap genenone
Upstream geneErbb4, LOC667842, EG241084
Downstream geneIkzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294M02.bB6Ng01-294M02.g
ACCGA090801GA090802
length1,0491,224
definitionB6Ng01-294M02.b B6Ng01-294M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagagcaaatggaagtccttaaaaatgaaatttgtactttat
ctgaataaagtaatgttaggaaaagacagacagttgagaatcaataatat
ttatcacagatcttcctcaggaaatattaggatggctgtgttaatatttt
tcaaattgcttgtatgttatcaattttattgtacttatttccttaatgtc
ttagaaatatttttagggttacaagatgtgatggttagagttgactaata
atttgaaaaaaatctagaatctcatgggaaatgggtctttgggtatgact
atgggaggttttgttaatttttttaaaaatgtatatacaattttattttt
taattatgtgtatgtgtgtacgtgcatacatgtgtgtgtgtgtacctgca
tgaatgctggtgcacttgaaatccagaagagggagtcagatcccctagag
ctggaataacaaaatgtcagatactacccaacacaggtggtggaaactgg
tcctaagaccaataagtgattttaaccaccttcactcacacttattttac
tgtgggtgtgtttgcactgtcagaacagatctgtggaggtcaaaggacaa
cttgaggggttggttctttccatcaacacttgggttctaaggaggaaagt
caggtcatcaagcttatgttacaagctcttttacccacagagccagccct
tagttatgttaattgaggtaggatgaccccctactgtgtgccacattgtg
cattcacccttccctgtttcctgattttatattacatgtaaccaattgtt
tccatgctaccttcccaccaggatgaattaaaacttgaactgtgggctaa
aataaacctttctctctcaagttgtttctgtcagttttcacaacagaaaa
agattaactaggacacaggagactgactgctctgatctaccagaaaatat
ggctggattctggatttcaggtaaaagggtcagatgttaaatcagaggag
agaaagaaagatgacagaggaaagaaagaaagagagggatggagagggg

gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcc
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatctagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacccagat
gtccctcaacagaggaacggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaattcacaaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtatagcgatatataaggtgcaatatgtaaaacatgaaactgaagaa
gaacgaagaccaaagtgtggacactttgctcattcttagaattggaaaca
atcacccatggaaggagttacagagacaaagtttggagctgagacaaaag
gatggtccatctagagactgccatatccagggatccatcccataattagc
ctctaagcgatgacaccattgcatacactagcaagccttttgttgcaagg
acggtgatatagctgtccctcgggcggactagggccggggcctagcaaac
acagaagtggatgctcacagtcaactattgggatggatcacaggggcccc
aatggaggagctagaagaaagttatccaagggaggcttaaggagatctgg
caaccctattcggaagaaacaaccattatggaacttaacccagttacccc
agagcttcttggacttctaggctggcatattgttattcaaaggatgaact
agtttgggcaatccactgggaaagggagagggccaattggacacgccaaa
cggttaattgccaagtacaggggtattggccaggccaaaaattggggaat
gtggggtggggcgcgaggggtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69506369_69507423
seq2: B6Ng01-294M02.b_47_1095 (reverse)

seq1  CCCCTCTCCCTCCCTCTCTTTCTTTCTTTCCTTCTGTCATTCTTTCTTTC  50
      ||||||||| ||||||||||||||||||||| ||||||| ||||||||||
seq2  CCCCTCTCCATCCCTCTCTTTCTTTCTTTCC-TCTGTCA-TCTTTCTTTC  48

seq1  TTCCTCTTCTGATTTTAACATCTGACCCTTTTACCTGAAAATCCAGAATC  100
      |  ||| ||||| |||||||||||||||||||||||| ||||||||||||
seq2  T--CTCCTCTGA-TTTAACATCTGACCCTTTTACCTG-AAATCCAGAATC  94

seq1  CAGCCATATTTTCTGGTAGATCAGAGCAGTCAGTCTCCTGTGTCCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATATTTTCTGGTAGATCAGAGCAGTCAGTCTCCTGTGTCCTAGTT  144

seq1  AATCTTTTTCTGTTGTGAAAACTGACAGAAACAACTTGAGAGAGAAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCTGTTGTGAAAACTGACAGAAACAACTTGAGAGAGAAAGGT  194

seq1  TTATTTTAGCCCACAGTTCAAGTTTTAATTCATCCTGGTGGGAAGGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGCCCACAGTTCAAGTTTTAATTCATCCTGGTGGGAAGGTAGC  244

seq1  ATGGAAACAATTGGTTACATGTAATATAAAATCAGGAAACAGGGAAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAACAATTGGTTACATGTAATATAAAATCAGGAAACAGGGAAGGGT  294

seq1  GAATGCACAATGTGGCACACAGTAGGGGGTCATCCTACCTCAATTAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCACAATGTGGCACACAGTAGGGGGTCATCCTACCTCAATTAACAT  344

seq1  AACTAAGGGCTGGCTCTGTGGGTAAAAGAGCTTGTAACATAAGCTTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGGCTGGCTCTGTGGGTAAAAGAGCTTGTAACATAAGCTTGATG  394

seq1  ACCTGACTTTCCTCCTTAGAACCCAAGTGTTGATGGAAAGAACCAACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACTTTCCTCCTTAGAACCCAAGTGTTGATGGAAAGAACCAACCCC  444

seq1  TCAAGTTGTCCTTTGACCTCCACAGATCTGTTCTGACAGTGCAAACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGTCCTTTGACCTCCACAGATCTGTTCTGACAGTGCAAACACAC  494

seq1  CCACAGTAAAATAAGTGTGAGTGAAGGTGGTTAAAATCACTTATTGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAAAATAAGTGTGAGTGAAGGTGGTTAAAATCACTTATTGGTCT  544

seq1  TAGGACCAGTTTCCACCACCTGTGTTGGGTAGTATCTGACATTTTGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCAGTTTCCACCACCTGTGTTGGGTAGTATCTGACATTTTGTTAT  594

seq1  TCCAGCTCTAGGGGATCTGACTCCCTCTTCTGGATTTCAAGTGCACCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCTAGGGGATCTGACTCCCTCTTCTGGATTTCAAGTGCACCAGC  644

seq1  ATTCATGCAGGTACACACACACACATGTATGCACGTACACACATACACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAGGTACACACACACACATGTATGCACGTACACACATACACAT  694

seq1  AATTAAAAAATAAAATTGTATATACATTTTTAAAAAAATTAACAAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAATAAAATTGTATATACATTTTTAAAAAAATTAACAAAACCT  744

seq1  CCCATAGTCATACCCAAAGACCCATTTCCCATGAGATTCTAGATTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGTCATACCCAAAGACCCATTTCCCATGAGATTCTAGATTTTTTT  794

seq1  CAAATTATTAGTCAACTCTAACCATCACATCTTGTAACCCTAAAAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTAGTCAACTCTAACCATCACATCTTGTAACCCTAAAAATATT  844

seq1  TCTAAGACATTAAGGAAATAAGTACAATAAAATTGATAACATACAAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGACATTAAGGAAATAAGTACAATAAAATTGATAACATACAAGCAA  894

seq1  TTTGAAAAATATTAACACAGCCATCCTAATATTTCCTGAGGAAGATCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAATATTAACACAGCCATCCTAATATTTCCTGAGGAAGATCTGT  944

seq1  GATAAATATTATTGATTCTCAACTGTCTGTCTTTTCCTAACATTACTTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATATTATTGATTCTCAACTGTCTGTCTTTTCCTAACATTACTTTA  994

seq1  TTCAGATAAAGTACAAATTTCATTTTTAAGGACTTCCATTTGCTCTATGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATAAAGTACAAATTTCATTTTTAAGGACTTCCATTTGCTCTATGG  1044

seq1  AATTC  1055
      |||||
seq2  AATTC  1049


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