BAC Information

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BAC

Clone NameB6Ng01-297L21
Chromosome1 (Build37)
Map Location 149,877,559 - 149,878,747
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297L21.bB6Ng01-297L21.g
ACCGA093028GA093029
length1,2051,193
definitionB6Ng01-297L21.b B6Ng01-297L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaaatggggttatttgatt
tagtggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtgttattgacggtgtcttttgccttgcagaaactttgtagtttca
tgaggtcccatttgtcaattctcaatcttatagcacaagccattgctgtt
ctattcaggaatttttctcctgtgcccatatcttcaaggcttttctccac
tttctcctctataagtttcagtgtctctggttttatgtaaagtttcttga
tccacttagatttgaccttagtacaaggagatagaaatggatcgattctc
attcttctacatgataacaaccaattgtgccagcaccattttttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggtttatttctgggtcttgaattctattccattgg
tctatttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccacaagaggttcttt
tattcttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattggttgaagaattgagttcgaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgaacatgagagttctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagttctttcgcttccttagttagagtcacgccaagatatttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctcagcctgttt
attctttgtgtagagaaaggccattgacttgtttagtattttaatatcag
ctacttcactgagctggttttatcaggtttatggagttctctgttgattt
taggttcacttatatatactatcaattatctggcaaaccgtgatattcga
ctccatctttcgaattgtaatcacgtttgaatctctccgatgtgtggtgg
tacga

gaattctttctgctgactctggatgacagctgaagcagccagtgcaattg
caggaaccagattctgtggtagactacaaagaggcccatttttctttctt
tcttttttttttcttaaatcatttatttattttttatttatttatctatt
taattttaaactccagattttattccccttccagtccatcctctgactgt
tcctcatcctatatttttctaccttgtctctattgaggatatctccagtc
cccaacgcccaacccccacctcaccagacatctaaactccctgagaaact
taaaaaaaaaaatcagactcatttgagtggttttgttcccagcaaactca
acagaaatcacaactgtcaaatcaaaataagaattaacatgataataaga
atagcaaaagttagaaggtcttgaacctcctgcaagccctaggcttttgt
ttgggaattttggtactcttgtctattcattctgttcttggtttagtgac
agcatctttctttgtagcttgatttcaacaacacattgacaccagtcctc
aaacccatctggcatctctcctaatcactacatttcaatgaacagtattt
gtaagcagtcagataaggtattattacttaacactgaaattcattatatt
ttatttctgaatagtagctacactgaagtcaaatgattttgttgactcat
tcaaatgtacttaaattaatggaacaagcagatacttcatccaaattgcc
tagaataattaaatgttatttctttggcactgataaaaaacgaattcttt
tgtctataggaacttctgcaataggaaaacattgttttttttttttacat
tttttttcttttattcaacaaagcacaaaatacaatgtttgagtgtgaag
agtcctatagagcttgaaagcaggactcccgtgccacatactgtttgtac
agtttttaccctgctacacttctccaaatatccaaggaggaatgtttgaa
aaaccagcctttcgtttttagtctgagaacacctgcttattctttttcat
aattcataatcagctgcatcacacatcattttgcagaaggcctgactgct
tgagcagaccactatgaaattctattagaatggggttgagccagttcaag
gctacgaacaattaacaatacataagtcctcgcctgcttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149877559_149878747
seq2: B6Ng01-297L21.g_66_1258 (reverse)

seq1  CCCCAAGCAG--CAGGACTTATGTATTGTAAATTGTTCGTAG-CTGGAAA  47
      ||||||||||   |||||||||||||||| |||||||||||| || |  |
seq2  CCCCAAGCAGGCGAGGACTTATGTATTGTTAATTGTTCGTAGCCTTG--A  48

seq1  ACTGCTTTCACACCATTC---TATGATTTCATAGTGGTCTTCCTCAGCAG  94
      ||||  |  || ||||||   ||  ||||||||||||||| |   |||||
seq2  ACTGGCTCAACCCCATTCTAATAGAATTTCATAGTGGTCTGCTCAAGCAG  98

seq1  TCAG--CCTCTGCAAAAATTGATTGTGTGATGCAGCTGATTATGAATTAT  142
      ||||  | |||||||||  ||| |||||||||||||||||||||||||||
seq2  TCAGGCCTTCTGCAAAA--TGA-TGTGTGATGCAGCTGATTATGAATTAT  145

seq1  GAAAAAG-ATAAGCAGGTGTTCCTTCAGACCTAAAACGAAAGGCTGGTTT  191
      ||||||| ||||||||||||||  ||||||  ||||||||||||||||||
seq2  GAAAAAGAATAAGCAGGTGTTC--TCAGACTAAAAACGAAAGGCTGGTTT  193

seq1  TTCAAACATTCCTCCTTGGATATTTGGAGAAGTGTAGCAGGGTAAAAACT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATTCCTCCTTGGATATTTGGAGAAGTGTAGCAGGGTAAAAACT  243

seq1  GTACAAACAGTATGTGGCACGGGAGTCCTGCTTTCAAGCTCTATAGGACT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAACAGTATGTGGCACGGGAGTCCTGCTTTCAAGCTCTATAGGACT  293

seq1  CTTCACACTCAAACATTGTATTTTGTGCTTTGTTGAATAAAAG-AAAAAA  340
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTCACACTCAAACATTGTATTTTGTGCTTTGTTGAATAAAAGAAAAAAA  343

seq1  ATGT-AAAAAAAAAAACAATGTTTTCCTATTGCAGAAGTTCCTATAGACA  389
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAAAAAAAAACAATGTTTTCCTATTGCAGAAGTTCCTATAGACA  393

seq1  AAAGAATTCGTTTTTTATCAGTGCCAAAGAAATAACATTTAATTATTCTA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTCGTTTTTTATCAGTGCCAAAGAAATAACATTTAATTATTCTA  443

seq1  GGCAATTTGGATGAAGTATCTGCTTGTTCCATTAATTTAAGTACATTTGA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTTGGATGAAGTATCTGCTTGTTCCATTAATTTAAGTACATTTGA  493

seq1  ATGAGTCAACAAAATCATTTGACTTCAGTGTAGCTACTATTCAGAAATAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCAACAAAATCATTTGACTTCAGTGTAGCTACTATTCAGAAATAA  543

seq1  AATATAATGAATTTCAGTGTTAAGTAATAATACCTTATCTGACTGCTTAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATGAATTTCAGTGTTAAGTAATAATACCTTATCTGACTGCTTAC  593

seq1  AAATACTGTTCATTGAAATGTAGTGATTAGGAGAGATGCCAGATGGGTTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGTTCATTGAAATGTAGTGATTAGGAGAGATGCCAGATGGGTTT  643

seq1  GAGGACTGGTGTCAATGTGTTGTTGAAATCAAGCTACAAAGAAAGATGCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTGGTGTCAATGTGTTGTTGAAATCAAGCTACAAAGAAAGATGCT  693

seq1  GTCACTAAACCAAGAACAGAATGAATAGACAAGAGTACCAAAATTCCCAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAACCAAGAACAGAATGAATAGACAAGAGTACCAAAATTCCCAA  743

seq1  ACAAAAGCCTAGGGCTTGCAGGAGGTTCAAGACCTTCTAACTTTTGCTAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCCTAGGGCTTGCAGGAGGTTCAAGACCTTCTAACTTTTGCTAT  793

seq1  TCTTATTATCATGTTAATTCTTATTTTGATTTGACAGTTGTGATTTCTGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTATCATGTTAATTCTTATTTTGATTTGACAGTTGTGATTTCTGT  843

seq1  TGAGTTTGCTGGGAACAAAACCACTCAAATGAGTCTGATTTTTTTTTTTA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGCTGGGAACAAAACCACTCAAATGAGTCTGATTTTTTTTTTTA  893

seq1  AGTTTCTCAGGGAGTTTAGATGTCTGGTGAGGTGGGGGTTGGGCGTTGGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCAGGGAGTTTAGATGTCTGGTGAGGTGGGGGTTGGGCGTTGGG  943

seq1  GACTGGAGATATCCTCAATAGAGACAAGGTAGAAAAATATAGGATGAGGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAGATATCCTCAATAGAGACAAGGTAGAAAAATATAGGATGAGGA  993

seq1  ACAGTCAGAGGATGGACTGGAAGGGGAATAAAATCTGGAGTTTAAAATTA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGAGGATGGACTGGAAGGGGAATAAAATCTGGAGTTTAAAATTA  1043

seq1  AATAGATAAATAAATAAAAAATAAATAAATGATTTAAGAAAAAAAAAAGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAATAAATAAAAAATAAATAAATGATTTAAGAAAAAAAAAAGA  1093

seq1  AAGAAAGAAAAATGGGCCTCTTTGTAGTCTACCACAGAATCTGGTTCCTG  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAATGGGCCTCTTTGTAGTCTACCACAGAATCTGGTTCCTG  1143

seq1  CAATTGCACTGGCTGCTTCAGCTGTCATCCAGAGTCAGCAGAAAGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCACTGGCTGCTTCAGCTGTCATCCAGAGTCAGCAGAAAGAATTC  1193


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