BAC Information

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BAC

Clone NameB6Ng01-298A19
Chromosome1 (Build37)
Map Location 75,498,261 - 75,674,991
singlet/doubletdoublet
Overlap geneAW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Upstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298A19.bB6Ng01-298A19.g
ACCGA093259GA093260
length977920
definitionB6Ng01-298A19.b B6Ng01-298A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,674,411 - 75,674,991)(75,498,261 - 75,499,179)
sequence
gaattcaagagatggttccattcactcccatcctagccgtggctgtcagc
ctccttcctccgcgggattagaagctccttgaagccagaagtatctgctt
tgttcctctaatttgctcccacagctttgaaatattaaaaggtctctgtg
attatttggggaaccagctggttaaggaatacctgctgctgaattaattt
ccagcattaataacaacaacaacaataataataataataataataataat
aataataataataataattcattttgcactcatgggagatcccggaacag
ggttggcatagaatattatatccaagaaaagtaaccttatgccaacatgt
attagaagcccgcagacccatttgagaccctatctcccaagctggtgaaa
taagagtctgaaatatcccttagcaacggtttcatgtctgggagctatcc
atcccaccagtgactgaaatggttacagtcacatagatggcatccacaac
cattcagatgtgtaaaattattcttgggctggggaaatacttcagtcagc
agcaaggatctgagtcagagctccagaacctgtgggtgttttttaagatg
tatttatttttatttatacgagtacactgtagctgtcttcagacacacac
cagaagagtgcatcggaccccattacagacggttgtgagccaccatgtgg
ttgctaggaattaaactcaggacctctggaagagcagttagtgctcttaa
ccgttgagccatctctccagcccagaacctatggcttatagtgctgaatg
tggtgctgtgggctcacaccagcactgggaggcaaaaccaacatggagtt
aactgctcagccagcctagcctacttgatcagttccagtccaaagagaaa
ctctggttttaaaaagttgggccagtcccttaggagtgacacccaaaagt
tgttcctggcctaacacattcatgtgc
gaattcactcaccactgagctatacccccagcccaactgcaaagcaaaac
atgccaaagaacggcgatgaggctgatgagcccaagagaagctctatatg
ctaggagttggaaagcgcccttctgagtgtctgagctctctatctgagcc
catcatgaacacctcttactcttccagcccagctgtgggaaacagccacc
gcatccgcctcgcttggcaaacacgacttctgtgctttgaacctatctgc
ctaggtgtccaccagttaccaaccttggatagtgagggcagcagagtctt
gcacaccagggcagctgaagccaaccagggccccactgtcccggtgcttg
acagcttgcaggatgagcctgtgctggaggcccttctgctctatgcggta
ccgcagggctccaggctccacctggccctctggctcattactctggagct
gctctccattaaggaaccaagagccctggatgatggcggacagatcaagg
gagaagacggcatcttccccatcatatacctgcacgtcttccaggcctga
caccaggcgagctgtgggcactggaacagagacagggcacggctgttaga
accagaaagggctgagcacggggtccccaatggaggagttagaggaagga
ctgaaggagctgaaggggtttgcaaccccataggaagaacaataatatca
accacccagactccccagagctcccaggaactaaaccactaaccaacgag
gacacatggaggggacccatggctccagccacatatgtagcagaggatgc
cttgttgggcatcaatgggaagagaggcccttggtcctgtgaaggctcta
tagatatcccaatgtaggggaattcaggggtgggggaacacccttataga
agcaggggaagggggtatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75674411_75674991
seq2: B6Ng01-298A19.b_46_626 (reverse)

seq1  AGGTTCTGGAGCTCTGACTCAGATCCTTGCTGCTGACTGAAGTATTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGGAGCTCTGACTCAGATCCTTGCTGCTGACTGAAGTATTTCCC  50

seq1  CAGCCCAAGAATAATTTTACACATCTGAATGGTTGTGGATGCCATCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAAGAATAATTTTACACATCTGAATGGTTGTGGATGCCATCTATG  100

seq1  TGACTGTAACCATTTCAGTCACTGGTGGGATGGATAGCTCCCAGACATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTAACCATTTCAGTCACTGGTGGGATGGATAGCTCCCAGACATGA  150

seq1  AACCGTTGCTAAGGGATATTTCAGACTCTTATTTCACCAGCTTGGGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTTGCTAAGGGATATTTCAGACTCTTATTTCACCAGCTTGGGAGAT  200

seq1  AGGGTCTCAAATGGGTCTGCGGGCTTCTAATACATGTTGGCATAAGGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCAAATGGGTCTGCGGGCTTCTAATACATGTTGGCATAAGGTTA  250

seq1  CTTTTCTTGGATATAATATTCTATGCCAACCCTGTTCCGGGATCTCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTGGATATAATATTCTATGCCAACCCTGTTCCGGGATCTCCCAT  300

seq1  GAGTGCAAAATGAATTATTATTATTATTATTATTATTATTATTATTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAAAATGAATTATTATTATTATTATTATTATTATTATTATTATTA  350

seq1  TTATTATTGTTGTTGTTGTTATTAATGCTGGAAATTAATTCAGCAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTGTTGTTGTTGTTATTAATGCTGGAAATTAATTCAGCAGCAGG  400

seq1  TATTCCTTAACCAGCTGGTTCCCCAAATAATCACAGAGACCTTTTAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTAACCAGCTGGTTCCCCAAATAATCACAGAGACCTTTTAATAT  450

seq1  TTCAAAGCTGTGGGAGCAAATTAGAGGAACAAAGCAGATACTTCTGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTGTGGGAGCAAATTAGAGGAACAAAGCAGATACTTCTGGCTT  500

seq1  CAAGGAGCTTCTAATCCCGCGGAGGAAGGAGGCTGACAGCCACGGCTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGCTTCTAATCCCGCGGAGGAAGGAGGCTGACAGCCACGGCTAGG  550

seq1  ATGGGAGTGAATGGAACCATCTCTTGAATTC  581
      |||||||||||||||||||||||||||||||
seq2  ATGGGAGTGAATGGAACCATCTCTTGAATTC  581

seq1: chr1_75498261_75499179
seq2: B6Ng01-298A19.g_67_986

seq1  GAATTCACTCACCACTGAGCTATACCCCCAGCCCAACTGCAAAGCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACCACTGAGCTATACCCCCAGCCCAACTGCAAAGCAAAAC  50

seq1  ATGCCAAAGAACGGCGATGAGGCTGATGAGCCCAAGAGAAGCTCTATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAAGAACGGCGATGAGGCTGATGAGCCCAAGAGAAGCTCTATATG  100

seq1  CTAGGAGTTGGAAAGCGCCCTTCTGAGTGTCTGAGCTCTCTATCTGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTTGGAAAGCGCCCTTCTGAGTGTCTGAGCTCTCTATCTGAGCC  150

seq1  CATCATGAACACCTCTTACTCTTCCAGCCCAGCTGTGGGAAACAGCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGAACACCTCTTACTCTTCCAGCCCAGCTGTGGGAAACAGCCACC  200

seq1  GCATCCGCCTCGCTTGGCAAACACGACTTCTGTGCTTTGAACCTATCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCGCCTCGCTTGGCAAACACGACTTCTGTGCTTTGAACCTATCTGC  250

seq1  CTAGGTGTCCACCAGTTACCAACCTTGGATAGTGAGGGCAGCAGAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGTCCACCAGTTACCAACCTTGGATAGTGAGGGCAGCAGAGTCTT  300

seq1  GCACACCAGGGCAGCTGAAGCCAACCAGGGCCCCACTGTCCCGGTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCAGGGCAGCTGAAGCCAACCAGGGCCCCACTGTCCCGGTGCTTG  350

seq1  ACAGCTTGCAGGATGAGCCTGTGCTGGAGGCCCTTCTGCTCTATGCGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGCAGGATGAGCCTGTGCTGGAGGCCCTTCTGCTCTATGCGGTA  400

seq1  CCGCAGGGCTCCAGGCTCCACCTGGCCCTCTGGCTCATTACTCTGGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGGGCTCCAGGCTCCACCTGGCCCTCTGGCTCATTACTCTGGAGCT  450

seq1  GCTCTCCATTAAGGAACCAAGAGCCCTGGATGATGGCGGACAGATCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCATTAAGGAACCAAGAGCCCTGGATGATGGCGGACAGATCAAGG  500

seq1  GAGAAGACGGCATCTTCCCCATCATATACCTGCACGTCTTCCAGGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACGGCATCTTCCCCATCATATACCTGCACGTCTTCCAGGCCTGA  550

seq1  CACCAGGCGAGCTGTGGGCACTGGAACAGAGACAGGGCACGGCTGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCGAGCTGTGGGCACTGGAACAGAGACAGGGCACGGCTGTTAGA  600

seq1  ACCAGAAAGGGCTGAGCACGGGGTCCCCAATGGAGGAGTTAGAGGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAGGGCTGAGCACGGGGTCCCCAATGGAGGAGTTAGAGGAAGGA  650

seq1  CTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAACAATAATATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAACAATAATATCA  700

seq1  ACCACCCAGACTCCCCAGAGCTCCCAGGAACTAAACCACTAACCAACGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCAGACTCCCCAGAGCTCCCAGGAACTAAACCACTAACCAACGAG  750

seq1  GACACATGGAGGGGACCCATGGCTCCAGCCACATATGTAGCAGAGGATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGAGGGGACCCATGGCTCCAGCCACATATGTAGCAGAGGATGC  800

seq1  CTTGTTGGGCATCAATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGGCATCAATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCTA  850

seq1  TAGATATCCCAATGTAGGGGAATTCAGGGGTGGGGGAACACCCTTATAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATCCCAATGTAGGGGAATTCAGGGGTGGGGGAACACCCTTATAGA  900

seq1  AGCAGGGG-AGGGGGTATGG  919
      |||||||| |||||||||||
seq2  AGCAGGGGAAGGGGGTATGG  920