BAC Information

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BAC

Clone NameB6Ng01-301O24
Chromosome1 (Build37)
Map Location 143,054,025 - 143,055,031
singlet/doubletsinglet
Overlap genenone
Upstream geneCfh, Kcnt2
Downstream geneEG226472, LOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301O24.bB6Ng01-301O24.g
ACCGA096121GA096122
length1,1891,006
definitionB6Ng01-301O24.b B6Ng01-301O24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccacagttaaatatcttttctcttttcatatatctttctatg
aataaatttattcaccatcatctatatcaaatagcattccagatggtaca
cacttaactaaaacaatcctaaatgattctcttacttggcaaatatgtta
attttgtgttgaacctcatgatatagataagaataatacaaaattcagta
ttgtgttttaaataatggaaggagcttaaaagaaaaaaaaatcaagaggc
ctagaagaacttactagagcaactcatatccctatgttgaaagaattaga
agaattatcagaaaaccagaggtcttgcttgcaatacagtttttggagtt
agcaatgtcagtttcccatcacctttctgagacaaaagtttaaaattatg
tgtaaaacatttaaatataagagttgtagcaactaaccctaagagaagca
attatttgttcctatttactggtgtatatttccaaaatctaaacattcct
cccgggaccagtgtgaccagggataagaacaccaacccttccataaaacc
ttcaaaccaaaatttgtcctgcctataagaaatactaggacaaagatgga
gcagagacagagtgattggtcaactagtgattggcacaactagagatcta
ttccatggacaagaaccaatccctgacattattaatgaaactctgttatg
cttgcagatacaagcctagaataaatgtcctctgagagactcctcctacc
atatgactgaaacagaaccagggacccacagtcaaaattagatggaactt
gcaagtcttgtggaatagttggaggaaagattgaggacctggaagggata
tgaagtccacagaaagaccaacagtcaactaacccttaagggctcccaga
aacagaaagacaaatcgaaagtatacatacgtgggctgggacacacacac
cacacaaacacacacacaccacacactctccctcacaaccctactgcgat
tatgtagatgtcagctggcctttatgtggacaaatggagagggggctgac
ctgattgtgttctctctccctatggaatcttgctctctaccaagggtgct
tgtctactccatggagagagagagattgtatagctgcatgacttgctggg
tgtcagtggacctggtaacccaagggagcacagtgaggt

gaattcttagaatatatttcaaaaaattttgggagcattttttttccgag
ctcaggaaagatcaactgtcagttaattctttctatcatatgttcctttt
tttctctttttctttttctttgttttctctttttctttttcctttacttt
tattttttctatttttaagttgttattttggtggtggttgtaaaatgtat
tttgttctaaaaaattaaaatatagttttagtcagcacaggtagtgtgaa
actcagtctctgcctctttagatctgtgcccttccacccaccccactgca
tgcctctccctctttatctctctctctctgatttggtggccagatgcctt
caaaagtgtgtggcttgtcctgttgaaataatgatgtagataagattcta
tgacatcagttataacgtatttcttaatctctcttttatctatgagatag
tcgttccctgattgtgtgtaatgcattactgtacatcatattcccaatac
ccttcttattaggtactacatccctcttttgtaatttctctttccaatat
ttacacatacttccattgtaggtgactttagatattatttctttgatcct
tagcatattcaaattttgaggctagcatatcttactgtttacttgataaa
gtcactaaaaatacacttaggtaatgttatattattcttctatttatttt
gctactcaggtacatattaatctagtcaatctaatggaaataaatgacaa
ttcatctttaagcctttatagaccctgctcacataagtttcacctcagtt
tttttatttttctcttttctttttcttttttcacaaaacagccatccttt
tctttcttctcttctttccttttttcacctatgggctactgtgagatgtg
tctctacaccacttaggttttgttcacctccaccctataaatggcttgat
taaaaaaacacaactaagccaggctggtggcacatgcctttaatcccagc
attcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143054025_143055031
seq2: B6Ng01-301O24.g_66_1071

seq1  GAATTCTTAGAATATATTTCAAAAAATTTTGGGAGCATTTTTTTTCCGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAATATATTTCAAAAAATTTTGGGAGCATTTTTTTTCCGAG  50

seq1  CTCAGGAAAGATCAACTGTCAGTTAATTCTTTCTATCATATGTTCCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAAGATCAACTGTCAGTTAATTCTTTCTATCATATGTTCCTTTT  100

seq1  TTTCTCTTTTTCTTTTTCTTTGTTTTCTCTTTTTCTTTTTCCTTTACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTTTTCTTTTTCTTTGTTTTCTCTTTTTCTTTTTCCTTTACTTT  150

seq1  TATTTTTTCTATTTTTAAGTTGTTATTTTGGTGGTGGTTGTAAAATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTATTTTTAAGTTGTTATTTTGGTGGTGGTTGTAAAATGTAT  200

seq1  TTTGTTCTAAAAAATTAAAATATAGTTTTAGTCAGCACAGGTAGTGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTAAAAAATTAAAATATAGTTTTAGTCAGCACAGGTAGTGTGAA  250

seq1  ACTCAGTCTCTGCCTCTTTAGATCTGTGCCCTTCCACCCACCCCACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTCTCTGCCTCTTTAGATCTGTGCCCTTCCACCCACCCCACTGCA  300

seq1  TGCCTCTCCCTCTTTATCTCTCTCTCTCTGATTTGGTGGCCAGATGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCCCTCTTTATCTCTCTCTCTCTGATTTGGTGGCCAGATGCCTT  350

seq1  CAAAAGTGTGTGGCTTGTCCTGTTGAAATAATGATGTAGATAAGATTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGTGTGGCTTGTCCTGTTGAAATAATGATGTAGATAAGATTCTA  400

seq1  TGACATCAGTTATAACGTATTTCTTAATCTCTCTTTTATCTATGAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCAGTTATAACGTATTTCTTAATCTCTCTTTTATCTATGAGATAG  450

seq1  TCGTTCCCTGATTGTGTGTAATGCATTACTGTACATCATATTCCCAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCCCTGATTGTGTGTAATGCATTACTGTACATCATATTCCCAATAC  500

seq1  CCTTCTTATTAGGTACTACATCCCTCTTTTGTAATTTCTCTTTCCAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTATTAGGTACTACATCCCTCTTTTGTAATTTCTCTTTCCAATAT  550

seq1  TTACACATACTTCCATTGTAGGTGACTTTAGATATTATTTCTTTGATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATACTTCCATTGTAGGTGACTTTAGATATTATTTCTTTGATCCT  600

seq1  TAGCATATTCAAATTTTGAGGCTAGCATATCTTACTGTTTACTTGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATTCAAATTTTGAGGCTAGCATATCTTACTGTTTACTTGATAAA  650

seq1  GTCACTAAAAATACACTTAGGTAATGTTATATTATTCTTCTATTTATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAAAATACACTTAGGTAATGTTATATTATTCTTCTATTTATTTT  700

seq1  GCTACTCAGGTACATATTAATCTAGTCAATCTAATGGAAATAAATGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCAGGTACATATTAATCTAGTCAATCTAATGGAAATAAATGACAA  750

seq1  TTCATCTTTAAGCCTTTATAGACCCTGCTCACATAAGTTTCACCTCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  TTCATCTTTAAGCCTTTATAGACCCTGCTCACATAAGTTTCACCTCAG--  798

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAACAG-CA  849
          ||||||| ||||| | |||| ||||| ||||||  | |||||| ||
seq2  ----TTTTTTTATTTTTCTCTTTTCTTTTTCTTTTTTCACAAAACAGCCA  844

seq1  TCTTTTTTCTTTTTTTCTTTTTTCCTTTTTTCA-CTAT-GGCTACTGT--  895
      || ||||  || || |||| ||||||||||||| |||| |||||||||  
seq2  TCCTTTTCTTTCTTCTCTTCTTTCCTTTTTTCACCTATGGGCTACTGTGA  894

seq1  GATGTGTCTCTAACACACTTAGG-TTTGTCTACCTCCACCTCATAAATGC  944
      ||||||||||||   |||||||| |||||  |||||||||  ||||||| 
seq2  GATGTGTCTCTACACCACTTAGGTTTTGTTCACCTCCACCCTATAAATGG  944

seq1  TTGGATTAAAAAACACAC-ACTAGGCCAGGCGTGGTGGCACATGCCTTTA  993
       | |||||||||| |||| |||| ||||||| ||||||||||||||||||
seq2  CTTGATTAAAAAA-ACACAACTAAGCCAGGC-TGGTGGCACATGCCTTTA  992

seq1  ATCCCAGCACTCGG  1007
      ||||||||| ||||
seq2  ATCCCAGCATTCGG  1006


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