BAC Information

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BAC

Clone NameB6Ng01-308L10
Chromosome1 (Build37)
Map Location 31,429,620 - 31,430,761
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
Downstream geneLOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308L10.bB6Ng01-308L10.g
ACCGA101143GA101144
length9861,136
definitionB6Ng01-308L10.b B6Ng01-308L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcatctaaataaatg
tttaacatccttaatcatcaggggaatgcaattcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggaggcagc
caggcatggtggcacaagcctttaattcaagcactctggaagcagaggca
ggcagatttctgagtttgaggccagcctggtctacaaagtgagttccagg
acagccagggctatacagagaaaccctgtctcaaaaacaacaacaacaac
aacaacaacaaatatttaagagacaacagatgctggtgaggatgtggtga
aagagaaacactgctccattgctggtgggattgcaagctggtataaccac
tctggaaatcagtttggcggttcctcagaaaattggacatagtactactg
gaggatccagcaatacctctcctgggcatattcccagaagatgttccaaa
ttgtaataaggacacattctccactatgttcatagcagccttatttataa
tagcaagaagctggaaagaacccagatgtccctcaacaaaggaatgtata
cagaaaatatggtacatttacaaaatggagtactactcagcttttaaaaa
caatgaatttatgaaattcctaggcaaatggatggatctggaggatatca
acctgagtgaggtaacccaatcacaaaagaatatacatgatatgcactca
ctgataagtggatattagcccagaaacttacaatacccaagatacaattt
gcaagacatatgaaattcaagaagaaggaagaccaaagtgtggatatttt
gttccttcttagaatggggaacaaaatagccatggaaggagttacaaaga
caaagttcggagctgagatgggaagaaaggatcatccagagactgcccca
cctggggattgatcccacagacaataaccaatccag
gaattccttggtctcagctttcccagctatgggattacaaacacagtgac
tttttttttcctttaaagatgataaaggtgggtggaggagcaccctgtta
gaggcaaaatggagagagatgagataggcagattcgtgaaggggagacca
ggaagggggatagcatttgaaatgtaaacaaataaaatgattaatacttt
tgttttaaaaagtgctgagagtctggacttaagttctaatgcttgcttca
gaagtactttattcaatgttccttcttcctagccagggaaaactccattt
taaattcataccaattttttcctgcaaatgccaacagaacacacacacac
acacacacacacacaccagattaataacgcataaaagtccaagagaaaaa
ataaaacaaagttaaaagagtccaaaaggagaaaattcaaagaaaatgaa
ataatctaatttagatatataatgttttaattctaataaattattaagtc
atagttttggaggcaagggcactggatggcaacattgcctgacttatgct
tctctgggtctggatgactaagtgttggtctttagtatttcttaggattt
gctctattatcttcaattttctctggaggaagttttgtgccaatttgtcc
cttttaaatatttttagagaattgtaaatgatagaaggaatatgaattca
aaggaggatttcttacgtaggcttagacagcagggtctagatagtccaat
aatagttatcagcacactggagatgtgaaaacccagttacagttcagccc
atgaggctggatgcctcagaattctcaggaatcctgaagaccttgaagat
tcttggagagccatgaatcttcagggtgtgttgtaaggctgatgaagcgg
ggattcagtgttagtggaatatcaagcatgagggactaaagcaaagacag
agccagcaacagggttgatgagcataccagcaagatgcgaagacagccag
aacaaaactagggactttccctcagtatcctatgcaggatgcgactaaaa
gtgatacccaacattaagtgtttgtcttcctcaacttataagtcttgaca
atgactagtgtatgtgagcacctttaattccagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31429620_31430761
seq2: B6Ng01-308L10.g_70_1205

seq1  GAATTCCTTGGTCTCAGCTTTCCCAGCTATGGGATTACAAACACAGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGTCTCAGCTTTCCCAGCTATGGGATTACAAACACAGTGAC  50

seq1  TTTTTTTTTCCTTTAAAGATGATAAAGGTGGGTGGAGGAGCACCCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCTTTAAAGATGATAAAGGTGGGTGGAGGAGCACCCTGTTA  100

seq1  GAGGCAAAATGGAGAGAGATGAGATAGGCAGATTCGTGAAGGGGAGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAATGGAGAGAGATGAGATAGGCAGATTCGTGAAGGGGAGACCA  150

seq1  GGAAGGGGGATAGCATTTGAAATGTAAACAAATAAAATGATTAATACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGGATAGCATTTGAAATGTAAACAAATAAAATGATTAATACTTT  200

seq1  TGTTTTAAAAAGTGCTGAGAGTCTGGACTTAAGTTCTAATGCTTGCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAAAGTGCTGAGAGTCTGGACTTAAGTTCTAATGCTTGCTTCA  250

seq1  GAAGTACTTTATTCAATGTTCCTTCTTCCTAGCCAGGGAAAACTCCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACTTTATTCAATGTTCCTTCTTCCTAGCCAGGGAAAACTCCATTT  300

seq1  TAAATTCATACCAATTTTTTCCTGCAAATGCCAACAGAACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATACCAATTTTTTCCTGCAAATGCCAACAGAACACACACACAC  350

seq1  ACACACACACACACACCAGATTAATAACGCATAAAAGTCCAAGAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACCAGATTAATAACGCATAAAAGTCCAAGAGAAAAA  400

seq1  ATAAAACAAAGTTAAAAGAGTCCAAAAGGAGAAAATTCAAAGAAAATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAAAGTTAAAAGAGTCCAAAAGGAGAAAATTCAAAGAAAATGAA  450

seq1  ATAATCTAATTTAGATATATAATGTTTTAATTCTAATAAATTATTAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTAATTTAGATATATAATGTTTTAATTCTAATAAATTATTAAGTC  500

seq1  ATAGTTTTGGAGGCAAGGGCACTGGATGGCAACATTGCCTGACTTATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTGGAGGCAAGGGCACTGGATGGCAACATTGCCTGACTTATGCT  550

seq1  TCTCTGGGTCTGGATGACTAAGTGTTGGTCTTTAGTATTTCTTAGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGTCTGGATGACTAAGTGTTGGTCTTTAGTATTTCTTAGGATTT  600

seq1  GCTCTATTATCTTCAATTTTCTCTGGAGGAAGTTTTGTGCCAATTTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATTATCTTCAATTTTCTCTGGAGGAAGTTTTGTGCCAATTTGTCC  650

seq1  CTTTTAAATATTTTTAGAGAATTGTAAATGATAGAAGGAATATGAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAATATTTTTAGAGAATTGTAAATGATAGAAGGAATATGAATTCA  700

seq1  AAGGAGGATTTCTTACGTAGGCTTAGACAGCAGGGTCTAGATAGTCCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGATTTCTTACGTAGGCTTAGACAGCAGGGTCTAGATAGTCCAAT  750

seq1  AATAGTTATCAGCACACTGGAGATGTGAAAACCCAGTTACAGTTCAGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTATCAGCACACTGGAGATGTGAAAACCCAGTTACAGTTCAGCCC  800

seq1  ATGAGGCTGGATGCCTCAGAATTCTCAGGAATCCTGAAGACCTTGAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTGGATGCCTCAGAATTCTCAGGAATCCTGAAGACCTTGAAGAT  850

seq1  TCTTGGAGAGCCATGAATCTTCAGGGTGTGTTGTAAGGCTGATGAAGCGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGAGCCATGAATCTTCAGGGTGTGTTGTAAGGCTGATGAAGCGG  900

seq1  GGATTCAGTGTTAGTGGAATATCAAGCATGAGGGACTAAAGCAAAGACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGTGTTAGTGGAATATCAAGCATGAGGGACTAAAGCAAAGACAG  950

seq1  AGCCAGCAACAGGGTTGATGAGCATACCAGCAAGATGCGAAGACAAGCAG  1000
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  AGCCAGCAACAGGGTTGATGAGCATACCAGCAAGATGCGAAGACAGCCAG  1000

seq1  -ACAAAACTAGGAACTTTCCCCTCAGTATTCCTTATGCCAGGATGCGACT  1049
       ||||||||||| ||||| ||||||||||  | |||| ||||||||||||
seq2  AACAAAACTAGGGACTTT-CCCTCAGTAT--CCTATG-CAGGATGCGACT  1046

seq1  AAAAGGTGATACCC-ACATTTAGTGTTTGTCTT-CTCACTTTAATTAGTC  1097
      |||| ||||||||| ||||| |||||||||||| ||||  || || ||||
seq2  AAAA-GTGATACCCAACATTAAGTGTTTGTCTTCCTCAACTT-ATAAGTC  1094

seq1  TGACCAAGGACTAGGTGTTATGGTGAGCACCTTTAATTCCAGCAC  1142
      |   ||| ||||| ||| ||| |||||||||||||||||||||||
seq2  TTGACAATGACTA-GTG-TAT-GTGAGCACCTTTAATTCCAGCAC  1136