BAC Information

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BAC

Clone NameB6Ng01-308L20
Chromosome1 (Build37)
Map Location 102,315,438 - 102,316,632
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308L20.bB6Ng01-308L20.g
ACCGA101163GA101164
length1,1771,169
definitionB6Ng01-308L20.b B6Ng01-308L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagactcagttatacatgaatttcaatgtaagcagaggactcaca
tgtctcctttacccattttctctagataaggaagggacaaagaatagaag
tcaacttatcttcatttatttcacctagaagatggcctctgctagaagaa
agcccagagatttcggccacagttagaaaccagtcagtgaggtatttcaa
aagcaattcattagctcccaagtacagactcatgcttatgcttttaaatg
tccctccccttcaagtttgttgctgaataacagaatatttaatagctaaa
gttaatacaagaccataattttccaaataaaagccacttctgtaacctca
ctgatctcccatcctctgtttatatgcaaccatggtcactgtgctggatg
actgcaatgctctctcaaggagatagtatcttgcttactcttgaccttaa
gcagtagtgcggaggttactgttagaatgcttagagacacaaacgcttaa
gtcctcagtgattcactgtcttagcaatccaaggttttatttattgtttg
tgattagtatttatatactcatttgaggtccctggggaagctagaacaaa
aacaaaaggtgtgtgcataattaacaataaaatgggggactaaagacaat
ttggggagagtgtatttatacagagacactcaaaaaagatacttacacga
ttttcaaacaaaccaggacatagccttgcctgcctgtagcatgaattcat
ttaaaggctacttaagaacacaatacaagctaatcatcagtataatatga
tacagtttgcccctaacctcaaagaacacagcatacttctacaatttatc
acattatacatgatattcctgtacagagattctgtaatacttgatttgaa
tatcatgatgactaaactataccagaatgctctcctaatcctgaagcata
acagaaagccaaaccagcattttcaactgtttcatctatattaagtacat
acaactggaggcatcagatccacatctcactttaccatgcttcagcttgg
tacagtctatattttggtgacataaatatttcatgctgctcatactgtat
ttgctacctggatacctgaatgtattatctagatgcatgcatctgaatgg
tgtggacactttaataggggtctatgg
gaattctcacctgtggaatactgaaggcctgagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcactccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctgtcaaggatgtggagaaagaggaacattcctccattgttggtg
ggattggaagcttgtacaaccactctggaaatcagtctggtgttccctca
gaaaattggacatagtactattggaagatcccgcaatgcctcccctgggc
atatacccagaaggtgttccaacttgtaataagaacacatgctccactat
gttcatagcagccttatttataataggcagaagctgaaaagaacccagat
gtccctcaatagaggaatggatacagaaaatgtggtacatctacacaatg
tagtactactcagcaatgaaaaataatgaatttatgaaattcttaggtaa
atgggtggatctgggggatatcgtcctgagtaaagttagccaatcacaaa
agaactcacttgatacacactcactgataagtgactattagcccagaaac
ttagaatacccaaggtacaatttgcaaaacacaagaaaatcaagaagaag
gaagaccaacccgtggatacttcattcctccttagaatagagaacaatat
actcatggaaggagttacagagtttggagctgagaggaaagaatagccca
tccagagacctcaccactggggattcatcccatgatcagccaccaaatgc
agacactattgcatatgctaccaagattttgctaacaggaccctgatata
gctgtctcatatgaggctatgtcagtgcctgcaaatatagaagtggatgt
tcatattcatctatttgacagaacacacagggcccccaatggaggagcta
gataaagtacccaaggagctgaaggggtctgcaaacctataggtagaaca
gcatatgaactacagtaccccagagctagtgtctctagctgcatatgtag
tagaagatggctcgtggtcattattggaggagagcccctagtcttgccat
cttcaaattgcccagttacagaatgcaaggactaacatggagtggttggc
taaaggggagaacctgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102315438_102316632
seq2: B6Ng01-308L20.b_47_1223 (reverse)

seq1  CCAT-GACCCCTAT--AAGTGT-CACAC--ATCAGATGCATTGCATTCTA  44
      |||| |||||||||  |||||| |||||   ||||||||| |||| ||||
seq2  CCATAGACCCCTATTAAAGTGTCCACACCATTCAGATGCA-TGCA-TCTA  48

seq1  GATATATACATTTTAAGTTATACAAGTAGCAAAATTACAGTTATGAAGCA  94
      |||| |||||  || || ||| || ||||||||  ||||| |||| ||||
seq2  GATA-ATACA--TTCAGGTATCCAGGTAGCAAA--TACAG-TATG-AGCA  91

seq1  GCAATGAAATAATTTTATGGTCACCAAAATATTAGGAACTGTACCAAAGG  144
      || ||||||||  ||||| |||||||||||| |||  ||||||||||  |
seq2  GC-ATGAAATA--TTTAT-GTCACCAAAATA-TAG--ACTGTACCAA--G  132

seq1  CTGAAGCATTGGTAAAGTTGAGAACCGTGGATCTGATGCCTCCAGTTGTA  194
      |||||||| |||||||| |||||   ||||||||||||||||||||||||
seq2  CTGAAGCA-TGGTAAAG-TGAGA--TGTGGATCTGATGCCTCCAGTTGTA  178

seq1  TGTACTTAATTATAGATGAAACAGTTGAAAATGCTGGTTTGGCTTTCTGT  244
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTAA-TATAGATGAAACAGTTGAAAATGCTGGTTTGGCTTTCTGT  227

seq1  TATGCTTCAGGATTAGGAGAGCATTTCTGGTATAGTTTAGTCATCATGAT  294
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATGCTTCAGGATTAGGAGAGCA-TTCTGGTATAGTTTAGTCATCATGAT  276

seq1  ATTCAAATCAAGTATTACAGAATCTCTGTACAGGAATATCATGTATAATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCAAGTATTACAGAATCTCTGTACAGGAATATCATGTATAATG  326

seq1  TGATAAATTGTAGAAGTATGCTGTGTTCTTTGAGGTTAGGGGCAAACTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTGTAGAAGTATGCTGTGTTCTTTGAGGTTAGGGGCAAACTGT  376

seq1  ATCATATTATACTGATGATTAGCTTGTATTGTGTTCTTAAGTAGCCTTTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTATACTGATGATTAGCTTGTATTGTGTTCTTAAGTAGCCTTTA  426

seq1  AATGAATTCATGCTACAGGCAGGCAAGGCTATGTCCTGGTTTGTTTGAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTCATGCTACAGGCAGGCAAGGCTATGTCCTGGTTTGTTTGAAA  476

seq1  ATCGTGTAAGTATCTTTTTTGAGTGTCTCTGTATAAATACACTCTCCCCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGTAAGTATCTTTTTTGAGTGTCTCTGTATAAATACACTCTCCCCA  526

seq1  AATTGTCTTTAGTCCCCCATTTTATTGTTAATTATGCACACACCTTTTGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTTAGTCCCCCATTTTATTGTTAATTATGCACACACCTTTTGT  576

seq1  TTTTGTTCTAGCTTCCCCAGGGACCTCAAATGAGTATATAAATACTAATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCTAGCTTCCCCAGGGACCTCAAATGAGTATATAAATACTAATC  626

seq1  ACAAACAATAAATAAAACCTTGGATTGCTAAGACAGTGAATCACTGAGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAATAAATAAAACCTTGGATTGCTAAGACAGTGAATCACTGAGGA  676

seq1  CTTAAGCGTTTGTGTCTCTAAGCATTCTAACAGTAACCTCCGCACTACTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCGTTTGTGTCTCTAAGCATTCTAACAGTAACCTCCGCACTACTG  726

seq1  CTTAAGGTCAAGAGTAAGCAAGATACTATCTCCTTGAGAGAGCATTGCAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGTCAAGAGTAAGCAAGATACTATCTCCTTGAGAGAGCATTGCAG  776

seq1  TCATCCAGCACAGTGACCATGGTTGCATATAAACAGAGGATGGGAGATCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGCACAGTGACCATGGTTGCATATAAACAGAGGATGGGAGATCA  826

seq1  GTGAGGTTACAGAAGTGGCTTTTATTTGGAAAATTATGGTCTTGTATTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTACAGAAGTGGCTTTTATTTGGAAAATTATGGTCTTGTATTAA  876

seq1  CTTTAGCTATTAAATATTCTGTTATTCAGCAACAAACTTGAAGGGGAGGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTATTAAATATTCTGTTATTCAGCAACAAACTTGAAGGGGAGGG  926

seq1  ACATTTAAAAGCATAAGCATGAGTCTGTACTTGGGAGCTAATGAATTGCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAAAGCATAAGCATGAGTCTGTACTTGGGAGCTAATGAATTGCT  976

seq1  TTTGAAATACCTCACTGACTGGTTTCTAACTGTGGCCGAAATCTCTGGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATACCTCACTGACTGGTTTCTAACTGTGGCCGAAATCTCTGGGC  1026

seq1  TTTCTTCTAGCAGAGGCCATCTTCTAGGTGAAATAAATGAAGATAAGTTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTAGCAGAGGCCATCTTCTAGGTGAAATAAATGAAGATAAGTTG  1076

seq1  ACTTCTATTCTTTGTCCCTTCCTTATCTAGAGAAAATGGGTAAAGGAGAC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATTCTTTGTCCCTTCCTTATCTAGAGAAAATGGGTAAAGGAGAC  1126

seq1  ATGTGAGTCCTCTGCTTACATTGAAATTCATGTATAACTGAGTCTGAATT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTCCTCTGCTTACATTGAAATTCATGTATAACTGAGTCTGAATT  1176

seq1  C  1195
      |
seq2  C  1177