BAC Information

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BAC

Clone NameB6Ng01-313B05
Chromosome1 (Build37)
Map Location 8,505,396 - 8,506,512
singlet/doubletsinglet
Overlap geneSntg1
Upstream geneLOC665063, LOC665069, LOC100039408
Downstream geneLOC100039474, LOC620444, EG665007, LOC665103, LOC100039464, EG620853, LOC665138
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313B05.bB6Ng01-313B05.g
ACCGA104385GA104386
length1,111900
definitionB6Ng01-313B05.b B6Ng01-313B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattaacaatctagattgattaaatgatttctctaaggggactt
aaaatcatcttaaagtgtcttctagtttacactctcttgccagtacctat
ctgtgccacagtttagggatctgtgggagcagcaccatcattctaattct
gtattttcattgtgtcgcaatcacagcaccttgctccagcacaacaacct
taaagaagatatatttcctatttaaaagtccctgtctctgagaaacacag
ggtcagggtctcacaaggctgcaaggcttgagccagatgaatttctcact
tacagcatggagtcctcttcaaggaatcacttcagactgagagacttctg
aggttgctgtcaattgctaacatggaacactttccataaaagatagtttt
attcttcatggcttgttagcctgtgtcactactattttctaatttattta
aaacgtttttcctgattagtctcctctagtataatgttactattaattaa
attgaattgaacttatcagagactgtttattcagtatctcaatatcattg
ccaactttggaacgttgtaagaaatttctataatcacagataaaaagcta
ccaaatagtgagttagtactcatgtttgtgatctctgaattatgcaaggg
tctgagctgttagataccatgttgtagtataatatctacattctattttt
cttaaaagttattatttaaatatttttattacgtattttcctcaattaca
tttccaatgctatccccaaaagtcccccatacccccacccccactcccct
acccacccattcccactttttggccctggcgttcccctgtactggggcat
atcaattttgcgggtccaatgggcctctctttccagtgatggccaaccag
gccatctttggatacatatgcagctagagtcaagagctctggggtactga
ttagttcataatgttgttgcaccaacagggttgcagatctctttagctcc
ttggatactttctctagctcctccattggggccctgtgctcatccatagc
tgaatgtgagcatcactaatgtgttgctagcccggccaagtctcacaaga
gacagctatat

gaattctacactaatcctatggatttttcggttgggagacttttaatgat
tacttctatttccttaggtgttatgggactatttagatggtttatctgat
cctgatttaaatttggttcctagcatttgtctagaaaatcatccatttct
tctagattttccagttttgttgagttttgttgagttttctagtaggatct
gataattttttcttcattttctgttgttatgtctcccttttcatttctga
ttttgttaatttgaatactgtctctattccctctggtttatctggctaag
ggtttatctgtcttgttgtttttcactgagaaccaactcctaattttgtt
gattctttgtatagttctctttgtttctatttggttgatttcaacactga
gtttggttatttcctgtccctactcctcttgggagtatttgattcttttt
gttctagggctttcagatgtgctgttaagctgctagtatatgtgatctcc
aatttcttcatggaagcactgagagctgtgagttttcctgttagcactgc
tttcattgtgttccataactttgggcatattgtgccttcattttcattaa
attctaaaaagtctttaatttctttttttttatttcatcactaaccaggt
tatcattgagtagataatttctatgtgtatatgggtgttcaggtttcagg
gtttgttttggtttgggatttggtattttttgggttcttgaagactaccc
ttggtctgtgatgaatctgataaaatgcatggaattatgtcaatcttctt
gggattcttaaggtttgtttttgtgtctgattatatggtcagttttggat
aaggtattattgaggtgcttagaataaggatattcctttgccttaatacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8505396_8506512
seq2: B6Ng01-313B05.b_45_1155 (reverse)

seq1  ATATAGCTGTCTCTTGTGAGACTTGGCCGGGGCCTAGCAAACACATAAGT  50
      |||||||||||||||||||||||||||||||  ||||| ||||||| |||
seq2  ATATAGCTGTCTCTTGTGAGACTTGGCCGGG--CTAGC-AACACATTAGT  47

seq1  GGATGCTCACATTCAGCTATGGGATGGAGCACAGGGCCCCCAATGGAGGA  100
       ||||||||||||||||||| |||| |||||||||| |||||||||||||
seq2  -GATGCTCACATTCAGCTAT-GGAT-GAGCACAGGG-CCCCAATGGAGGA  93

seq1  GCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTGTTGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTGTTGGTGC  143

seq1  AACAACATTATGAACTAATCAGTACCCCAGAGCTCTTGACTCTAGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTATGAACTAATCAGTACCCCAGAGCTCTTGACTCTAGCTGCA  193

seq1  TATGTATCCAAAGATGGCCTGGTTGGCCATCACTGGAAAGAGAGGCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCCAAAGATGGCCTGGTTGGCCATCACTGGAAAGAGAGGCCCAT  243

seq1  TGGACCCGCAAAATTGATATGCCCCAGTACAGGGGAACGCCAGGGCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCGCAAAATTGATATGCCCCAGTACAGGGGAACGCCAGGGCCAAA  293

seq1  AAGTGGGAATGGGTGGGTAGGGGAGTGGGGGTGGGGGTATGGGGGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAATGGGTGGGTAGGGGAGTGGGGGTGGGGGTATGGGGGACTTT  343

seq1  T-GGGATAGCATTGGAAATGTAATTGAGGAAAATACGTAATAAAAATATT  399
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATAGCATTGGAAATGTAATTGAGGAAAATACGTAATAAAAATATT  393

seq1  TAAATAATAACTTTTAAGAAAAATAGAATGTAGATATTATACTACAACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATAACTTTTAAGAAAAATAGAATGTAGATATTATACTACAACAT  443

seq1  GGTATCTAACAGCTCAGACCCTTGCATAATTCAGAGATCACAAACATGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTAACAGCTCAGACCCTTGCATAATTCAGAGATCACAAACATGAG  493

seq1  TACTAACTCACTATTTGGTAGCTTTTTATCTGTGATTATAGAAATTTCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTCACTATTTGGTAGCTTTTTATCTGTGATTATAGAAATTTCTT  543

seq1  ACAACGTTCCAAAGTTGGCAATGATATTGAGATACTGAATAAACAGTCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGTTCCAAAGTTGGCAATGATATTGAGATACTGAATAAACAGTCTC  593

seq1  TGATAAGTTCAATTCAATTTAATTAATAGTAACATTATACTAGAGGAGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTCAATTCAATTTAATTAATAGTAACATTATACTAGAGGAGAC  643

seq1  TAATCAGGAAAAACGTTTTAAATAAATTAGAAAATAGTAGTGACACAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGGAAAAACGTTTTAAATAAATTAGAAAATAGTAGTGACACAGGC  693

seq1  TAACAAGCCATGAAGAATAAAACTATCTTTTATGGAAAGTGTTCCATGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGCCATGAAGAATAAAACTATCTTTTATGGAAAGTGTTCCATGTT  743

seq1  AGCAATTGACAGCAACCTCAGAAGTCTCTCAGTCTGAAGTGATTCCTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGACAGCAACCTCAGAAGTCTCTCAGTCTGAAGTGATTCCTTGA  793

seq1  AGAGGACTCCATGCTGTAAGTGAGAAATTCATCTGGCTCAAGCCTTGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTCCATGCTGTAAGTGAGAAATTCATCTGGCTCAAGCCTTGCAG  843

seq1  CCTTGTGAGACCCTGACCCTGTGTTTCTCAGAGACAGGGACTTTTAAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAGACCCTGACCCTGTGTTTCTCAGAGACAGGGACTTTTAAATA  893

seq1  GGAAATATATCTTCTTTAAGGTTGTTGTGCTGGAGCAAGGTGCTGTGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATATCTTCTTTAAGGTTGTTGTGCTGGAGCAAGGTGCTGTGATT  943

seq1  GCGACACAATGAAAATACAGAATTAGAATGATGGTGCTGCTCCCACAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACACAATGAAAATACAGAATTAGAATGATGGTGCTGCTCCCACAGAT  993

seq1  CCCTAAACTGTGGCACAGATAGGTACTGGCAAGAGAGTGTAAACTAGAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAACTGTGGCACAGATAGGTACTGGCAAGAGAGTGTAAACTAGAAG  1043

seq1  ACACTTTAAGATGATTTTAAGTCCCCTTAGAGAAATCATTTAATCAATCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAAGATGATTTTAAGTCCCCTTAGAGAAATCATTTAATCAATCT  1093

seq1  AGATTGTTAATAGAATTC  1117
      ||||||||||||||||||
seq2  AGATTGTTAATAGAATTC  1111


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