BAC Information

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BAC

Clone NameB6Ng01-314E14
Chromosome1 (Build37)
Map Location 84,833,554 - 84,834,642
singlet/doubletsinglet
Overlap geneTrip12
Upstream gene5033414K04Rik, LOC100039638, Dner
Downstream geneFbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314E14.bB6Ng01-314E14.g
ACCGA105264GA105265
length1,0851,152
definitionB6Ng01-314E14.b B6Ng01-314E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataccaaaataattcatttgtttcgggatatgtttaaatatct
tcttggaaatattttttactaagttaaaaaaaaattacttctctcagtta
aagcaccttggtctactctattagactcccattcatttttagtatttgct
aattttacaatagcactctctgcgattgcaaacagttctcagatagcctc
accagagaaaaactaaatgtcagctgagccgactcaaacactactcactg
aaacagtggagcagatgtaaacaatctttacagttctgcaattcttagtc
cattcgtagaaaagcagtcatatacaaagctacaatgtattaaaaacata
ccagttctggaactaaacatggaactacgattaagtggaactaggagtaa
gttaaatagtcttaaaatgtaatactttagtaactgcataagcctaagaa
aataagactccagtaatgccttccacaatttattatccataaacttgtaa
cttcaaacgcaacacacacaaggccacatatacaaggcctcttgcctctt
ttctaacacaactgagacctttgttcccagcatcatttttaccctactca
atcaactttctacctcgtatttttgttttgttttcagagatgagattcta
agcctcaacttgctgagtctttaaaaaaaaaaaattagatgccaaaaata
agattcgaaagcaagaaaaagttagacaccactgtggcctacaaaccgaa
gaatgcctggagatctggtgatttggcagccaggccagatcgcgagctca
ggctagggagacaggagagcggttagaccactcagaacagagtcactgcg
ctatcaaccgccccccaccccaacccccaccccaacccccactccccgtt
tacctagtaacatccccgcccccattaaccggagccagcaaactaaagcc
cagcccagaggctaaaactaaaacctctccgagacgagacacgctaaaac
gcgtttaacagaaacaaattctgggtggtaagcggtccgtccaattcttc
tcaaccgcgatcatcctcacgtccccttaaatagt
gaattcatttgccatgttttgttttattttgttttttaagaatttgctgt
tcttctattagaatcaagttgctacagtcataaaatgctgactcatggga
taatcaaaaaagaacctcaagaaaatgactgaattgatatgcaaatgaaa
gactgggctttgatctgcaagagctaagcaacctggatgagctgtctgga
gagaaaacagagttcttttagaatttttttctagcagctacccagagaga
actgcttggagagcaaatacaggtcttttacaatctttttcctgcaagag
agcaaaagagagctgtctcaggcagaggaaactgtctgaagcagaaagct
gtcttgagcagaaagctatcttgagcatactacagatccaagagctatct
acagagagctgtctagggagccatcttgagcagattacaaggctaatcag
cttgtacccatgatttgacttttagtcatttttttggttggtggtgaaca
ctctccttcctcagaaccctctccaagctgaggttgatccttagcagaac
tcaagaagttagataccaataatccaaataacccaattaaaaaatgaggt
acagagctaaatagagaattttcaacaaaggaatcttgaatggctgaaaa
acacctaaagaaatgttcaacatccttagtcatcagggaaatgcaaatca
aaacaactctgagattccaccttacacctatcagaatggctaagatcaaa
aactcaaagaacaacacatgctgacaaggttgtggagcaagagaaatact
cctacactgctgggggaggacaaacttgtacaaccactctggaagtcaac
ttggcagttgctcagaaaattgggaatagttctacctcaagacccagcta
taccacacctgagcatgtacccagaagatgtgccaccaatccccacaaag
gacatttgctcaactatgctcagcagtttttattcataataaacagaaaa
ctggaaacaacccagattccctcactaaggaatggagacagaaaaatgtg
ctcattacacgtggactactactcaccatttaaacaagaaatatcaggat
ttctcacggcaactgcaataggaagctttaaaaaatattccactccttta
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84833554_84834642
seq2: B6Ng01-314E14.b_44_1128

seq1  GAATTCAATACCAAAATAATTCATTTGTTTCGGGATATGTTTAAATATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACCAAAATAATTCATTTGTTTCGGGATATGTTTAAATATCT  50

seq1  TCTTGGAAATATTTTTTACTAAGTTAAAAAAAAATTACTTCTCTCAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAAATATTTTTTACTAAGTTAAAAAAAAATTACTTCTCTCAGTTA  100

seq1  AAGCACCTTGGTCTACTCTATTAGACTCCCATTCATTTTTAGTATTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTTGGTCTACTCTATTAGACTCCCATTCATTTTTAGTATTTGCT  150

seq1  AATTTTACAATAGCACTCTCTGCGATTGCAAACAGTTCTCAGATAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACAATAGCACTCTCTGCGATTGCAAACAGTTCTCAGATAGCCTC  200

seq1  ACCAGAGAAAAACTAAATGTCAGCTGAGCCGACTCAAACACTACTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGAAAAACTAAATGTCAGCTGAGCCGACTCAAACACTACTCACTG  250

seq1  AAACAGTGGAGCAGATGTAAACAATCTTTACAGTTCTGCAATTCTTAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGGAGCAGATGTAAACAATCTTTACAGTTCTGCAATTCTTAGTC  300

seq1  CATTCGTAGAAAAGCAGTCATATACAAAGCTACAATGTATTAAAAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGTAGAAAAGCAGTCATATACAAAGCTACAATGTATTAAAAACATA  350

seq1  CCAGTTCTGGAACTAAACATGGAACTACGATTAAGTGGAACTAGGAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTGGAACTAAACATGGAACTACGATTAAGTGGAACTAGGAGTAA  400

seq1  GTTAAATAGTCTTAAAATGTAATACTTTAGTAACTGCATAAGCCTAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATAGTCTTAAAATGTAATACTTTAGTAACTGCATAAGCCTAAGAA  450

seq1  AATAAGACTCCAGTAATGCCTTCCACAATTTATTATCCATAAACTTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACTCCAGTAATGCCTTCCACAATTTATTATCCATAAACTTGTAA  500

seq1  CTTCAAACGCAACACACACAAGGCCACATATACAAGGCCTCTTGCCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAACGCAACACACACAAGGCCACATATACAAGGCCTCTTGCCTCTT  550

seq1  TTCTAACACAACTGAGACCTTTGTTCCCAGCATCATTTTTACCCTACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACACAACTGAGACCTTTGTTCCCAGCATCATTTTTACCCTACTCA  600

seq1  ATCAACTTTCTACCTCGTATTTTTGTTTTGTTTTCAGAGATGAGATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTTCTACCTCGTATTTTTGTTTTGTTTTCAGAGATGAGATTCTA  650

seq1  AGCCTCAACTTGCTGAGTCTTTAAAAAAAAAAAATTAGATGCCAAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAACTTGCTGAGTCTTTAAAAAAAAAAAATTAGATGCCAAAAATA  700

seq1  AGATTCGAAAGCAAGAAAAAGTTAGACACCACTGTGGCCTACAAACCGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCGAAAGCAAGAAAAAGTTAGACACCACTGTGGCCTACAAACCGAA  750

seq1  GAATGCCTGGAGATCTGGTGATTTGGCAGCCAGGCCAGATCGCGAGCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCTGGAGATCTGGTGATTTGGCAGCCAGGCCAGATCGCGAGCTCA  800

seq1  GGCTAGGGAGACAGGAGAGCGGTTAGACCACTCAGAACAGAGTCACTGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGGAGACAGGAGAGCGGTTAGACCACTCAGAACAGAGTCACTGCG  850

seq1  CTATCAACCGCCCCCCACCCCAACCCCCACCCC-ACCCCCACTCCCCGTT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTATCAACCGCCCCCCACCCCAACCCCCACCCCAACCCCCACTCCCCGTT  900

seq1  TACCTAGTAACATCCCCGCCCCCAATTAACGGAGCCAGCAAACTAAAGCC  949
      |||||||||||||||||||||||| | | |||||||||||||||||||||
seq2  TACCTAGTAACATCCCCGCCCCCATTAACCGGAGCCAGCAAACTAAAGCC  950

seq1  CAGCCCAGAAGCTAAAACTAAAACCTCTCCGAGACGAGACACGCTAAAAC  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGAGGCTAAAACTAAAACCTCTCCGAGACGAGACACGCTAAAAC  1000

seq1  GCG-TTAACAGAAACAAA-TCTGGGTGGGAAGCCGCCCCTTCCCATTTTC  1047
      ||| |||||||||||||| ||||||||| ||| ||  || ||| ||| | 
seq2  GCGTTTAACAGAAACAAATTCTGGGTGGTAAG-CGGTCCGTCCAATTCTT  1049

seq1  CTCTCACCGCGGATCAATTCCCTCACGTCCCCCTAAAATAGT  1089
      |||  ||||| |||||    |||||||| ||||| |||||||
seq2  CTC-AACCGC-GATCA---TCCTCACGT-CCCCTTAAATAGT  1085