BAC Information

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BAC

Clone NameB6Ng01-314O15
Chromosome1 (Build37)
Map Location 27,163,813 - 27,164,832
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314O15.bB6Ng01-314O15.g
ACCGA105701GA105702
length1,0231,128
definitionB6Ng01-314O15.b B6Ng01-314O15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagaaaggctggaaagagaaaggggatcatatttgaatttca
aaattgtctttaaatattttaaatgtttgaaaaatttggaattctttcta
acttcatcatcaatatgtcatgagatcatctctattgattccaattatgt
tataattaataaactctggtttttcttacctattatattatcatcatgat
catcaccaacaccaccatcattatcattataaattaataataaattatat
caatattatattaatatcatatactaacaatattatattactactactgc
tagtctgtgtagtagtatttgggctaaacaattattctgtcaataaggca
cattatcatctagctgttatcatttttaaatgacaatcaaaatctcagaa
aaaagtcaacatggaaatttttggaagatatctattagtaaaataaatgg
ttaatggtgaagttttactctcagaggttttttttaatgttttaaagtgg
gtcttagtgaagtgaatgcactgaacatagtagaaaggtttagcattaac
aatttctctgatctgtgattcttctatggcagggtcagtaaaagtaaaat
tacctttccacctgttttgaaatctcctctagtttatgaaatccctgtaa
tttcctggtattattttagcaatacaatagagagcttccttcacctagaa
aaacccaagagataactacaagctgccaggacactactctgtataactta
ttttacttttttactctaaatcctaagatcaataatcacacaccacatac
acacacaccacacacacacacacacacacacactcacacacaaacacaca
cacacacacacatatacacacacacacacacacacacatacacacacaca
cacacacacacacacaccacactcacacacacacacacacacacacatac
acacacacacacacacacacacataccccacacacacacacataccacac
ttcacaacacaccaccacacaca

gaattctcacctgagggataccgaatggcagagaagcaactgaaaaaatg
ttcaacatttaatcatcagggaaatgcaaatcaaaacaaccctgagattc
acctcacaccagtcagaatggctaagatcaaaaattcaggtgacaactta
tgctggcaagtatgtggagaaagaggaacactcctccattgttgttggga
ttgcaagcttgtacaaccactctggaaatcagtttggtggtttctcagag
aattggacatagtactaccggaggatcctgcaatacctctcctgggcata
tattcagaagatgtctcaactggtaagaaggacacatgctccactatctt
catggcagccttatttatagtagccagaagctggaaagaactcagatgcc
cctaaacagaggaatggatacagaaagtgtggaacatttacacaatggag
tactactcagctaataaaaagaatgaatttatgaaattcctatgcaaatg
gatggaccgtgagggcatcatcctgagtgaggtaacccgatcacaaagga
actcacacaatatgtactcactgataagtagatattagcccagaaactta
ggatacccaagatataagacacaatttgctaaacacatgaaactcaaaag
gaacgaagaccggagtgtggacactttgccccttcttagaatgggaacaa
aacacacatgaaaggagttacagtgacaatgtttgggagctgtgatgaaa
cgatggaccatctagagactgcaatatccggggagccatcccataatcag
cttccaaatgctgacaccattgcatacactaacaaggttttgctgaaagg
acccagatatagctgtctcttgtgagactatgctggggcctagcaaacac
agaagtagatgctcacagtcagctattggacggatcactggctcccaatg
gagaatctagagaaagtactcaatggagcttaagggatctgctacgctat
aggtggaacaacattatgaaccaccagtaccctgagctcttgactctagc
tgcatgttatcaaagaatgggccttagtagccatcattgatagagagggt
cccatttgagacttgctatcatgtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27163813_27164832
seq2: B6Ng01-314O15.b_48_1070 (reverse)

seq1  TGTGTGTGTGTGTGTG-TGTG-AGTGTGGTATGTGTGTGTGTGT-GTGTA  47
      ||||||||   ||||| |||| |||||||||||||||||||||| | |||
seq2  TGTGTGTGGTGGTGTGTTGTGAAGTGTGGTATGTGTGTGTGTGTGGGGTA  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTG  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTG  100

seq1  AGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT  150

seq1  GTGTGTGTATATGTGTGTGTGTGTGTGTGTTTGTGTGTGAGTGTGTGTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTATATGTGTGTGTGTGTGTGTGTTTGTGTGTGAGTGTGTGTGT  200

seq1  GTGTGTGTGTGTGTGGTGTGTGTGTATGTGGTGTGTGATTATTGATCTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGGTGTGTGTGTATGTGGTGTGTGATTATTGATCTTA  250

seq1  GGATTTAGAGTAAAAAAGTAAAATAAGTTATACAGAGTAGTGTCCTGGCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAGAGTAAAAAAGTAAAATAAGTTATACAGAGTAGTGTCCTGGCA  300

seq1  GCTTGTAGTTATCTCTTGGGTTTTTCTAGGTGAAGGAAGCTCTCTATTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGTTATCTCTTGGGTTTTTCTAGGTGAAGGAAGCTCTCTATTGT  350

seq1  ATTGCTAAAATAATACCAGGAAATTACAGGGATTTCATAAACTAGAGGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAATAATACCAGGAAATTACAGGGATTTCATAAACTAGAGGAG  400

seq1  ATTTCAAAACAGGTGGAAAGGTAATTTTACTTTTACTGACCCTGCCATAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAACAGGTGGAAAGGTAATTTTACTTTTACTGACCCTGCCATAG  450

seq1  AAGAATCACAGATCAGAGAAATTGTTAATGCTAAACCTTTCTACTATGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCACAGATCAGAGAAATTGTTAATGCTAAACCTTTCTACTATGTT  500

seq1  CAGTGCATTCACTTCACTAAGACCCACTTTAAAACATTAAAAAAAACCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCATTCACTTCACTAAGACCCACTTTAAAACATTAAAAAAAACCTC  550

seq1  TGAGAGTAAAACTTCACCATTAACCATTTATTTTACTAATAGATATCTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTAAAACTTCACCATTAACCATTTATTTTACTAATAGATATCTTC  600

seq1  CAAAAATTTCCATGTTGACTTTTTTCTGAGATTTTGATTGTCATTTAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTTCCATGTTGACTTTTTTCTGAGATTTTGATTGTCATTTAAAA  650

seq1  ATGATAACAGCTAGATGATAATGTGCCTTATTGACAGAATAATTGTTTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAACAGCTAGATGATAATGTGCCTTATTGACAGAATAATTGTTTAG  700

seq1  CCCAAATACTACTACACAGACTAGCAGTAGTAGTAATATAATATTGTTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATACTACTACACAGACTAGCAGTAGTAGTAATATAATATTGTTAG  750

seq1  TATATGATATTAATATAATATTGATATAATTTATTATTAATTTATAATGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATATTAATATAATATTGATATAATTTATTATTAATTTATAATGA  800

seq1  TAATGATGGTGGTGTTGGTGATGATCATGATGATAATATAATAGGTAAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGGTGGTGTTGGTGATGATCATGATGATAATATAATAGGTAAGA  850

seq1  AAAACCAGAGTTTATTAATTATAACATAATTGGAATCAATAGAGATGATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGAGTTTATTAATTATAACATAATTGGAATCAATAGAGATGATC  900

seq1  TCATGACATATTGATGATGAAGTTAGAAAGAATTCCAAATTTTTCAAACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACATATTGATGATGAAGTTAGAAAGAATTCCAAATTTTTCAAACA  950

seq1  TTTAAAATATTTAAAGACAATTTTGAAATTCAAATATGATCCCCTTTCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATTTAAAGACAATTTTGAAATTCAAATATGATCCCCTTTCTC  1000

seq1  TTTCCAGCCTTTCTAATGAATTC  1020
      |||||||||||||||||||||||
seq2  TTTCCAGCCTTTCTAATGAATTC  1023


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