BAC Information

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BAC

Clone NameB6Ng01-315J06
Chromosome1 (Build37)
Map Location 76,334,213 - 76,335,269
singlet/doubletsinglet
Overlap genenone
Upstream geneDes, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream geneLOC100039137, Tfdp1-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315J06.b
ACCGA106194
length1,053
definitionB6Ng01-315J06.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatggaagaaaagcaatgcacattgtgggccaagcttctaccct
ataaaatcttagaggagtggttctcaaccttcctaatgctgtggcccttt
aatacagttcctcacattatagtgaccccaaaccataaaattattttatt
gctattacataattataattttgctactgttatgaatcataatataaata
actgatataaagaatatcttatatgtgaccccaaaagggtcattgcttta
gagactaaaccaatacataatagaataatggtttggtttttattccaaag
agccccctttgcctaagtcattgggcatttctaggtaaagacaagccatt
ctgtaaccatagcctgactgagccttatctccaaatgtggtagattcttc
agtgtgatccaccaaatgctgaacagaagggacctattataccttctcat
ataagaggctgttagttggatctttcccaagatcaaatatttacattctc
aaattctttgacatggtacaaaatttaggaatgccatacaaatatcacaa
actcttaattagtgaaatgaatgagaagcagacaaaggtagtaatttgtg
ttgataaattcagcttttgctgcaggtgcttcttcaagacagagatagtg
acattgtaaacacagaaatgagagtgctttgaaggccaatgtgacctgga
gaatatgaaagggaaaaaagaaaaagggaacagactgagggcaaagcatg
caaacagaagcatggccaggtagactggacagcatggctactttagggat
attattgctatgatggcacaccaaaagcaacctgggcaggaaggggttta
tttgccttatgtatcccatggagggaagctaaggcaggaacctggaggca
ggagctgatgcagagaggccttgggaggggaactgcttactggcttgttc
ctcatggcttgcccagcccacatcctttcttgttttgtgtttatctctct
cgtataatagatcccaccaatcccccctctccatccacctcctccagtga
ttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76334213_76335269
seq2: B6Ng01-315J06.b_47_1099 (reverse)

seq1  GAATCACTGGGAGGA-GTGGATGGAGAGGGGGATTTGGTTGGGATCTATT  49
      |||||||| |||||| ||||||||||||||||  |||| |||||||||||
seq2  GAATCACT-GGAGGAGGTGGATGGAGAGGGGGGATTGG-TGGGATCTATT  48

seq1  ATACGAGAGAAGAATAAAACACAAAACAAAGAAAGGATGTGGGCTGGGCA  99
      ||||||||| |||   ||||||||||| ||||||||||||||||||||||
seq2  ATACGAGAG-AGA--TAAACACAAAAC-AAGAAAGGATGTGGGCTGGGCA  94

seq1  AGCCATGAGGAACAAGCCAGTAAGCAGTTCCCCT-CCAAGGCCTCTCTGC  148
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCATGAGGAACAAGCCAGTAAGCAGTTCCCCTCCCAAGGCCTCTCTGC  144

seq1  ATCAGCTCCTGCCTCCAGGTTCCTGCCTTAGCTTCCCTCCATGGGATACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCCTGCCTCCAGGTTCCTGCCTTAGCTTCCCTCCATGGGATACA  194

seq1  TAAGGCAAATAAACCCCTTCCTGCCCAGGTTGCTTTTGGTGTGCCATCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAATAAACCCCTTCCTGCCCAGGTTGCTTTTGGTGTGCCATCAT  244

seq1  AGCAATAATATCCCTAAAGTAGCCATGCTGTCCAGTCTACCTGGCCATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAATATCCCTAAAGTAGCCATGCTGTCCAGTCTACCTGGCCATGC  294

seq1  TTCTGTTTGCATGCTTTGCCCTCAGTCTGTTCCCTTTTTCTTTTTTCCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTGCATGCTTTGCCCTCAGTCTGTTCCCTTTTTCTTTTTTCCCT  344

seq1  TTCATATTCTCCAGGTCACATTGGCCTTCAAAGCACTCTCATTTCTGTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTCTCCAGGTCACATTGGCCTTCAAAGCACTCTCATTTCTGTGT  394

seq1  TTACAATGTCACTATCTCTGTCTTGAAGAAGCACCTGCAGCAAAAGCTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGTCACTATCTCTGTCTTGAAGAAGCACCTGCAGCAAAAGCTGA  444

seq1  ATTTATCAACACAAATTACTACCTTTGTCTGCTTCTCATTCATTTCACTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAACACAAATTACTACCTTTGTCTGCTTCTCATTCATTTCACTA  494

seq1  ATTAAGAGTTTGTGATATTTGTATGGCATTCCTAAATTTTGTACCATGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGTTTGTGATATTTGTATGGCATTCCTAAATTTTGTACCATGTC  544

seq1  AAAGAATTTGAGAATGTAAATATTTGATCTTGGGAAAGATCCAACTAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTGAGAATGTAAATATTTGATCTTGGGAAAGATCCAACTAACA  594

seq1  GCCTCTTATATGAGAAGGTATAATAGGTCCCTTCTGTTCAGCATTTGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTATATGAGAAGGTATAATAGGTCCCTTCTGTTCAGCATTTGGTG  644

seq1  GATCACACTGAAGAATCTACCACATTTGGAGATAAGGCTCAGTCAGGCTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACTGAAGAATCTACCACATTTGGAGATAAGGCTCAGTCAGGCTA  694

seq1  TGGTTACAGAATGGCTTGTCTTTACCTAGAAATGCCCAATGACTTAGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACAGAATGGCTTGTCTTTACCTAGAAATGCCCAATGACTTAGGCA  744

seq1  AAGGGGGCTCTTTGGAATAAAAACCAAACCATTATTCTATTATGTATTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGCTCTTTGGAATAAAAACCAAACCATTATTCTATTATGTATTGG  794

seq1  TTTAGTCTCTAAAGCAATGACCCTTTTGGGGTCACATATAAGATATTCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTCTAAAGCAATGACCCTTTTGGGGTCACATATAAGATATTCTT  844

seq1  TATATCAGTTATTTATATTATGATTCATAACAGTAGCAAAATTATAATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGTTATTTATATTATGATTCATAACAGTAGCAAAATTATAATTA  894

seq1  TGTAATAGCAATAAAATAATTTTATGGTTTGGGGTCACTATAATGTGAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGCAATAAAATAATTTTATGGTTTGGGGTCACTATAATGTGAGG  944

seq1  AACTGTATTAAAGGGCCACAGCATTAGGAAGGTTGAGAACCACTCCTCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTATTAAAGGGCCACAGCATTAGGAAGGTTGAGAACCACTCCTCTA  994

seq1  AGATTTTATAGGGTAGAAGCTTGGCCCACAATGTGCATTGCTTTTCTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATAGGGTAGAAGCTTGGCCCACAATGTGCATTGCTTTTCTTCC  1044

seq1  ATAGAATTC  1057
      |||||||||
seq2  ATAGAATTC  1053