BAC Information

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BAC

Clone NameB6Ng01-319H07
Chromosome1 (Build37)
Map Location 67,862,288 - 67,863,385
singlet/doubletsinglet
Overlap genenone
Upstream gene1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319H07.bB6Ng01-319H07.g
ACCGA109079GA109080
length1,0941,102
definitionB6Ng01-319H07.b B6Ng01-319H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattatgacattttcatatgtactggctattatactctattctt
atttacatgcctccttccctttcctttgccaagctcacctgtcttggctt
ttaattgctgtgaaaagacagcatgaccaaggcaactcttataaggtcaa
catttaattagggttgactgacagattcagaggttcagtccattatcatc
aagtcagcagcatggcagtgtccagacaggtgtggttacaggaggagctg
aagttctacatcttcctttgaaggcgtctagcagaaaatttgctcccttg
tgttcaggagaatggtctcattgcccacccccacagtaacacactttctc
caacaaggtcacacctactctgataaggctgtaccccctaatagtgctac
tccctcgaccaagcatattcaaaccaccacaccacgcctccccaatctct
tcctcccttttgttggtctcttcctccacacagagtcttccctccttctt
acacatcacatgtatctattatcctttttactatccccatactccgttaa
gatctctttctccccttttttggactcttctctacttcaatgacttacat
acatggaacacacacacacacacacacacacacacacactcttaaagcca
taggtaacttatgagtgaaagaaatgaaacaactctacaattctggctta
attcatttaacatagtgatctctagttatattaatttctttgaaaatatc
atttcatttcttaacaaattaataaaattgcaatgtgtgaatgtactgca
ttttatttgttgctggacacataggctggttccattccttggctattgcc
ttatatcacaatcaacatggtgtacatatatctaggtggaaatactaatc
tactttcccttcaggtcaatatccaaacatggtataactaggcttttcat
agtgcctacactagattaattacttctaatagtatataagagttacacat
attcatcacatttattgtcatcttttttttctgatgatagtcatctactg
aaatagatagagtctcaaaaaggttttgttgtatttcactgatg
gaattcagtaagaagattacctattcagtaacattcaaatttacttctag
tagagatggtgaaactaattaagcattacaaagaatggagcctgaatagc
tcagggctggtctgcagagtgtttacttgggacagtagccagtcttatac
aaaaaaagggaatacacaatggcctagctaataggtaggtttaccatgta
aaagttagggaatcccattgagacaggaatcttcactacagccaggtata
gcaggctacattgcatattagaagcaagttggtgaattcttctgacaaat
ggagattctccacagatacttaaaagaacagccaagttacactcatacaa
gaatttatcagggcctaggaaatagggggggttgtgatattgcattattc
atgagaaggtctgctagagcagacccccctggtgctagctttcacaaggc
tcaaaggagtagcacaaattgtgactagggtgtgaaatccttacctgtca
ttagctgaccctaggcagtgctgttctatctttactgtaaatattacctg
gttcctgtaagtccttttgaagtcattcctttgttttgtgtcaggtaact
tcaatgtgctttgcctgctgtgacttcctacccctctgttttctgtatta
tataagactggtgttcactttgtgacaatacatttagattctacacaacc
ttgtgttgattgtgtctgtcattttgccgactccttgtccacctacaacc
agagacctgttttacgcaaacagggaccaagagggtctgctgcactactg
ctctatgaggataggagagatcttttctatcttcttagatcttcttcaag
tcttaaagtttttatcatacaagtctttcacttgctgactacatttatgc
tagtctatgtgatattattcaaggctattatgaaaggccttgttcctgat
ttcttttcagtctgttattcgagtattaagagggctacaatttcgccaag
taagtttgtatcagctattagctgaaatgtttatcactgtacgactaatg
taaagcttttttgacattgattgaggtatcgtatacaaataatgcaagag
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67862288_67863385
seq2: B6Ng01-319H07.b_42_1135

seq1  GAATTCCATTATGACATTTTCATATGTACTGGCTATTATACTCTATTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATGACATTTTCATATGTACTGGCTATTATACTCTATTCTT  50

seq1  ATTTACATGCCTCCTTCCCTTTCCTTTGCCAAGCTCACCTGTCTTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATGCCTCCTTCCCTTTCCTTTGCCAAGCTCACCTGTCTTGGCTT  100

seq1  TTAATTGCTGTGAAAAGACAGCATGACCAAGGCAACTCTTATAAGGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGCTGTGAAAAGACAGCATGACCAAGGCAACTCTTATAAGGTCAA  150

seq1  CATTTAATTAGGGTTGACTGACAGATTCAGAGGTTCAGTCCATTATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTAGGGTTGACTGACAGATTCAGAGGTTCAGTCCATTATCATC  200

seq1  AAGTCAGCAGCATGGCAGTGTCCAGACAGGTGTGGTTACAGGAGGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGCAGCATGGCAGTGTCCAGACAGGTGTGGTTACAGGAGGAGCTG  250

seq1  AAGTTCTACATCTTCCTTTGAAGGCGTCTAGCAGAAAATTTGCTCCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTACATCTTCCTTTGAAGGCGTCTAGCAGAAAATTTGCTCCCTTG  300

seq1  TGTTCAGGAGAATGGTCTCATTGCCCACCCCCACAGTAACACACTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGAGAATGGTCTCATTGCCCACCCCCACAGTAACACACTTTCTC  350

seq1  CAACAAGGTCACACCTACTCTGATAAGGCTGTACCCCCTAATAGTGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGTCACACCTACTCTGATAAGGCTGTACCCCCTAATAGTGCTAC  400

seq1  TCCCTCGACCAAGCATATTCAAACCACCACACCACGCCTCCCCAATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCGACCAAGCATATTCAAACCACCACACCACGCCTCCCCAATCTCT  450

seq1  TCCTCCCTTTTGTTGGTCTCTTCCTCCACACAGAGTCTTCCCTCCTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTTTTGTTGGTCTCTTCCTCCACACAGAGTCTTCCCTCCTTCTT  500

seq1  ACACATCACATGTATCTATTATCCTTTTTACTATCCCCATACTCCGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCACATGTATCTATTATCCTTTTTACTATCCCCATACTCCGTTAA  550

seq1  GATCTCTTTCTCCCCTTTTTTGGACTCTTCTCTACTTCAATGACTTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTTCTCCCCTTTTTTGGACTCTTCTCTACTTCAATGACTTACAT  600

seq1  ACATGGAACACACACACACACACACACACACACACACACTCTTAAAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAACACACACACACACACACACACACACACACACTCTTAAAGCCA  650

seq1  TAGGTAACTTATGAGTGAAAGAAATGAAACAACTCTACAATTCTGGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAACTTATGAGTGAAAGAAATGAAACAACTCTACAATTCTGGCTTA  700

seq1  ATTCATTTAACATAGTGATCTCTAGTTATATTAATTTCTTTGAAAATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTAACATAGTGATCTCTAGTTATATTAATTTCTTTGAAAATATC  750

seq1  ATTTCATTTCTTAACAAATTAATAAAATTGCAATGTGTGAATGTACTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTCTTAACAAATTAATAAAATTGCAATGTGTGAATGTACTGCA  800

seq1  TTTTATTTGTTGCTGGACACATAGGCTGGTTCCATTCCTTGGCTATTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTTGCTGGACACATAGGCTGGTTCCATTCCTTGGCTATTGCC  850

seq1  TTATATCACAATCAACATGGTGTACATATATCTAGGTGG-AATACTAATC  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTATATCACAATCAACATGGTGTACATATATCTAGGTGGAAATACTAATC  900

seq1  TACTTT-CCTTCAGGTCAATATCCAAACATGGTATAACTAGGCTTTTCAT  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCCTTCAGGTCAATATCCAAACATGGTATAACTAGGCTTTTCAT  950

seq1  AGTGCCTACACTAGATTAATTACTTCTAATAGTATATAAGAGTTACACAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTACACTAGATTAATTACTTCTAATAGTATATAAGAGTTACACAT  1000

seq1  ATTCATCAACATTTATTGTCATCTTTTTTTCTTGATGATAGTCAATCTAA  1048
      ||||||| ||||||||||||||||||||||  ||||||||||| |||| |
seq2  ATTCATC-ACATTTATTGTCATCTTTTTTTTCTGATGATAGTC-ATCT-A  1047

seq1  CTGAAATAAGATAGAGTCTCAAAAAAGTTTTAATTTGTATTTCACTGATG  1098
      ||||||| ||||||||||||||||| |||||   ||||||||||||||||
seq2  CTGAAAT-AGATAGAGTCTCAAAAAGGTTTT--GTTGTATTTCACTGATG  1094