BAC Information

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BAC

Clone NameB6Ng01-320P08
Chromosome1 (Build37)
Map Location 62,401,365 - 62,564,227
singlet/doubletdoublet
Overlap genePard3b
Upstream genenone
Downstream geneLOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P08.bB6Ng01-320P08.g
ACCGA110194GA110195
length3241,115
definitionB6Ng01-320P08.b B6Ng01-320P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,563,904 - 62,564,227)(62,401,365 - 62,402,494)
sequence
tcacagtacttggcactaatcttatgaccctttcccttctttctttggta
gtgtaataattcacatgttttatatatttttaatctttgtctacccctca
gtagtgactgagggctgcaaggtgttggatcattcggatatcttctataa
aacttagtacggagtccccgcctgaaatacttttacctcataagtgtttg
tgggagttgaaaacaagcgagccatttaagacagtgtgcagtgactttga
ctttgaagcaggagggattgactttggttttaaggatgagggaggctagg
tcctgtggttgggggtggtggtgg
gaattctcacactgtcttctggactttgtgagcacctacacacacacaca
cacacacacacacacacacacatctaaagataaatctttaaaaagtattt
actttatttttcacaaaatgaatcataaaagttttgttgtttcattttgt
taacttgccaatttttttcaaattaagtctaaccttaatttctttagtat
ttttaaattcaggcagggtgacaccatagctatcacttcttttttttttc
atcattactaccgcaggtcttggctggaaatgcactctttatgagcagtg
tggagcttggaatggaattagaaactagaggcagtaacatacagatattg
acttccatgaaacccagtagtgtgatcgttgataaaagttattcatttgc
atgtaatacatctgaagttttgttagtctgcacctgaacacaagaagaga
aaattagcacaacgttgtgtgtggattgtgggcataaagatttaaagaag
tttatgagtgatagaaaggacagcaatatctacaagaatactcactaaaa
tgctacatagagccaaggtttattgcttaactaaaagatgaacctgagag
agaagggctactcatcagctgggcggagcacaaagacaaatgagatgctg
gggtacccagcgggcaggcttgtttgctctatggctttaatcattttttt
tcagctctcaagcatgtctgcaaatgtttgtttatccctctgttttctga
cgatgtgttcatggaaggatgagggccctgtatagagttaattaatatga
aaatggatggctaccttctattcaaagtctgattgctgctccttgctgtc
ccttcctactccgtgtaatcttgattattctgcagctcttgttctctgct
gcccaaagcagtaggtgatttgattttctcatacttatcacaggaagagt
gatcacatagggtgtcaaccaaaaggcttatttgtttaattaggttcctc
tgctctaatacgcctgcccaactccatacgtatgcaaatacacaacagca
ctgagagaacacacttactttatctcattctgaatatgagcttagatttg
ttaccgatcagacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62563904_62564227
seq2: B6Ng01-320P08.b_54_377 (reverse)

seq1  CCACCACCACCCCCAACCACAGGACCTAGCCTCCCTCATCCTTAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCACCCCCAACCACAGGACCTAGCCTCCCTCATCCTTAAAACCA  50

seq1  AAGTCAATCCCTCCTGCTTCAAAGTCAAAGTCACTGCACACTGTCTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATCCCTCCTGCTTCAAAGTCAAAGTCACTGCACACTGTCTTAAA  100

seq1  TGGCTCGCTTGTTTTCAACTCCCACAAACACTTATGAGGTAAAAGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGCTTGTTTTCAACTCCCACAAACACTTATGAGGTAAAAGTATTT  150

seq1  CAGGCGGGGACTCCGTACTAAGTTTTATAGAAGATATCCGAATGATCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGGGGACTCCGTACTAAGTTTTATAGAAGATATCCGAATGATCCAA  200

seq1  CACCTTGCAGCCCTCAGTCACTACTGAGGGGTAGACAAAGATTAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGCAGCCCTCAGTCACTACTGAGGGGTAGACAAAGATTAAAAATA  250

seq1  TATAAAACATGTGAATTATTACACTACCAAAGAAAGAAGGGAAAGGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACATGTGAATTATTACACTACCAAAGAAAGAAGGGAAAGGGTCA  300

seq1  TAAGATTAGTGCCAAGTACTGTGA  324
      ||||||||||||||||||||||||
seq2  TAAGATTAGTGCCAAGTACTGTGA  324

seq1: chr1_62401365_62402494
seq2: B6Ng01-320P08.g_67_1181

seq1  GAATTCTCACACTGTCTTCTGGACTTTGTGAGCACCTACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACACTGTCTTCTGGACTTTGTGAGCACCTACACACACACACA  50

seq1  CACACACACACACACACACACATCTAAAGATAAATCTTTAAAAAGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACATCTAAAGATAAATCTTTAAAAAGTATTT  100

seq1  ACTTTATTTTTCACAAAATGAATCATAAAAGTTTTGTTGTTTCATTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTTCACAAAATGAATCATAAAAGTTTTGTTGTTTCATTTTGT  150

seq1  TAACTTGCCAATTTTTTTCAAATTAAGTCTAACCTTAATTTCTTTAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGCCAATTTTTTTCAAATTAAGTCTAACCTTAATTTCTTTAGTAT  200

seq1  TTTTAAATTCAGGCAGGGTGACACCATAGCTATCACTTCTTTTTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTCAGGCAGGGTGACACCATAGCTATCACTTCTTTTTTTTTTC  250

seq1  ATCATTACTACCGCAGGTCTTGGCTGGAAATGCACTCTTTATGAGCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACTACCGCAGGTCTTGGCTGGAAATGCACTCTTTATGAGCAGTG  300

seq1  TGGAGCTTGGAATGGAATTAGAAACTAGAGGCAGTAACATACAGATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTGGAATGGAATTAGAAACTAGAGGCAGTAACATACAGATATTG  350

seq1  ACTTCCATGAAACCCAGTAGTGTGATCGTTGATAAAAGTTATTCATTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCATGAAACCCAGTAGTGTGATCGTTGATAAAAGTTATTCATTTGC  400

seq1  ATGTAATACATCTGAAGTTTTGTTAGTCTGCACCTGAACACAAGAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATACATCTGAAGTTTTGTTAGTCTGCACCTGAACACAAGAAGAGA  450

seq1  AAATTAGCACAACGTTGTGTGTGGATTGTGGGCATAAAGATTTAAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGCACAACGTTGTGTGTGGATTGTGGGCATAAAGATTTAAAGAAG  500

seq1  TTTATGAGTGATAGAAAGGACAGCAATATCTACAAGAATACTCACTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGTGATAGAAAGGACAGCAATATCTACAAGAATACTCACTAAAA  550

seq1  TGCTACATAGAGCCAAGGTTTATTGCTTAACTAAAAGATGAACCTGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATAGAGCCAAGGTTTATTGCTTAACTAAAAGATGAACCTGAGAG  600

seq1  AGAAGGGCTACTCATCAGCTGGGCGGAGCACAAAGACAAATGAGATGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCTACTCATCAGCTGGGCGGAGCACAAAGACAAATGAGATGCTG  650

seq1  GGGTACCCAGCGGGCAGGCTTGTTTGCTCTATGGCTTTAATCA-TTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGTACCCAGCGGGCAGGCTTGTTTGCTCTATGGCTTTAATCATTTTTTT  700

seq1  TCAGCTCTCAAGCATGTCTGCAAATGTTTGTTTATCCCTCTGTTTTCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTCAAGCATGTCTGCAAATGTTTGTTTATCCCTCTGTTTTCTGA  750

seq1  CGATGTGTTCATGGAAGGATGAGGGCCCTGTATAGAGTTAATTAATATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTGTTCATGGAAGGATGAGGGCCCTGTATAGAGTTAATTAATATGA  800

seq1  AAATGGATGGCTACCTTCTATTCAAAGTCTGATTGCTGCTCCTTGCTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATGGCTACCTTCTATTCAAAGTCTGATTGCTGCTCCTTGCTGTC  850

seq1  CCTTCCTACTCCGTGTAATCTTGATTATTCTGCAGCTCTTGTTCTCTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTACTCCGTGTAATCTTGATTATTCTGCAGCTCTTGTTCTCTGCT  900

seq1  GCCCAAAGCAGTAGGGTGATTTGATTTTCTCATACTTATCACAGGAAAGA  949
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  GCCCAAAGCAGTA-GGTGATTTGATTTTCTCATACTTATCACAGG-AAGA  948

seq1  GTGATCACATAGGGTGTCAACCAAAAGGCTTATTTGTTTAATTAGGGTTC  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGATCACATAGGGTGTCAACCAAAAGGCTTATTTGTTTAATTA-GGTTC  997

seq1  CTTCTGCTCTTAATACGCCTGCCCAACTCCCATTACGTTAATGCAAATTA  1049
      | ||||||| ||||||||||||||||||||   |||||  ||||||| ||
seq2  C-TCTGCTC-TAATACGCCTGCCCAACTCC--ATACGT--ATGCAAA-TA  1040

seq1  CACAACAGCACTGGAGGAGAACACAC-TACTTTATCTCATTCTGGGATAA  1098
      |||||||||||||   |||||||||| ||||||||||||||||  ||  |
seq2  CACAACAGCACTG--AGAGAACACACTTACTTTATCTCATTCT--GAATA  1086

seq1  TGAGGTTTAGATTTGTTAACCGATCAGGACAA  1130
      ||| | ||||||||||| |||||||| |||||
seq2  TGA-GCTTAGATTTGTT-ACCGATCA-GACAA  1115