BAC Information

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BAC

Clone NameB6Ng01-321H02
Chromosome1 (Build37)
Map Location 100,707,691 - 100,708,614
singlet/doubletsinglet
Overlap genenone
Upstream genePam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream geneC230078M14Rik, LOC633295
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321H02.bB6Ng01-321H02.g
ACCGA110546GA110547
length1,199946
definitionB6Ng01-321H02.b B6Ng01-321H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ctaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttatgttattccagaca
aatttgcaaattgctctttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaattctttcttcagagatttgaagtttttatcatac
agatctttcactttccttagttagagtcacgccaagatatttttatatat
ttgtgactattgagaacgggtgtggttccctattttctttcctcagcctg
cttattcctttgtatagagaaaggccattgacttgttgagtctatgttat
atcccagctacttcaccggagctgtttatcagctcaagaagttctctggt
agaaatttttaaggttcacgtagttatactaatcaatgcccatcggctaa
gggcaatttgacttccgcttttcaacttggtatcccaactgaatcgccc
gaattcattgcatataaaaaattaaaatagagacatatagaaaaaatttt
cagttgactagataaagggtaatatgtttacagtctacaatggcttggga
tggctctagggagaagtagtcagtatctggattgattttaagtgatatga
tgtgctgatagatcagaaagactaaggagaactgaaaactctcaaaatct
ccaggcaactagatagatggttgtaccactcattaaactggaataacata
tgtgatatgagaggcagacctataaatggaattggcatacatgaactgtt
tgatgcacatcctctaattatgtaatcaaaccagcaactgagtcaatgat
gttttagagcaaggatgagataatagtgcaatgaatagttagtctttact
tgtgtatctgtattgtaaggaaaaaaataaggagttgtctcatctggtaa
agtgctttcttgtaagcactaagaccttagcttgatcccccaaatctcct
ctaacaaagaagacttgtggcatgattttcagtcataactctagatagaa
ggaactgcagctttcaataactcaatagccagtcatcctagcctacttgg
tggattctaggctcatgaaaaatgctgactgaaaaaaacaataacaaagt
gaatggaagctaaagaatggcagctgaatatggtagtctctacacggtcc
atcctttcgtctcagctccaaactttgtctctgtaactccttccatgggt
gttttgttcccacttctaaggaggggcatagtgtccacacttcaggcttc
atttttcttgagtttcatgtgtttagtaaattgtatcttatatcttgggt
atcctaggttttgggctaatatccacttatcagtgagtacatattgtgtg
agttcctttgtgaatgtgttaccttcactcaggatgatgcccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100707691_100708614
seq2: B6Ng01-321H02.g_69_992

seq1  GAATTCATTGCATATAAAAAATTAAAATAGAGACATATAGAAAAAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCATATAAAAAATTAAAATAGAGACATATAGAAAAAATTTT  50

seq1  CAGTTGACTAGATAAAGGGTAATATGTTTACAGTCTACAATGGCTTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACTAGATAAAGGGTAATATGTTTACAGTCTACAATGGCTTGGGA  100

seq1  TGGCTCTAGGGAGAAGTAGTCAGTATCTGGATTGATTTTAAGTGATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAGGGAGAAGTAGTCAGTATCTGGATTGATTTTAAGTGATATGA  150

seq1  TGTGCTGATAGATCAGAAAGACTAAGGAGAACTGAAAACTCTCAAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGATAGATCAGAAAGACTAAGGAGAACTGAAAACTCTCAAAATCT  200

seq1  CCAGGCAACTAGATAGATGGTTGTACCACTCATTAAACTGGAATAACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAACTAGATAGATGGTTGTACCACTCATTAAACTGGAATAACATA  250

seq1  TGTGATATGAGAGGCAGACCTATAAATGGAATTGGCATACATGAACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATATGAGAGGCAGACCTATAAATGGAATTGGCATACATGAACTGTT  300

seq1  TGATGCACATCCTCTAATTATGTAATCAAACCAGCAACTGAGTCAATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCACATCCTCTAATTATGTAATCAAACCAGCAACTGAGTCAATGAT  350

seq1  GTTTTAGAGCAAGGATGAGATAATAGTGCAATGAATAGTTAGTCTTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGCAAGGATGAGATAATAGTGCAATGAATAGTTAGTCTTTACT  400

seq1  TGTGTATCTGTATTGTAAGGAAAAAAATAAGGAGTTGTCTCATCTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCTGTATTGTAAGGAAAAAAATAAGGAGTTGTCTCATCTGGTAA  450

seq1  AGTGCTTTCTTGTAAGCACTAAGACCTTAGCTTGATCCCCCAAATCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTCTTGTAAGCACTAAGACCTTAGCTTGATCCCCCAAATCTCCT  500

seq1  CTAACAAAGAAGACTTGTGGCATGATTTTCAGTCATAACTCTAGATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAAGAAGACTTGTGGCATGATTTTCAGTCATAACTCTAGATAGAA  550

seq1  GGAACTGCAGCTTTCAATAACTCAATAGCCAGTCATCCTAGCCTACTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGCAGCTTTCAATAACTCAATAGCCAGTCATCCTAGCCTACTTGG  600

seq1  TGGATTCTAGGCTCATGAAAAATGCTGACTGAAAAAAACAATAACAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCTAGGCTCATGAAAAATGCTGACTGAAAAAAACAATAACAAAGT  650

seq1  GAATGGAAGCTAAAGAATGGCAGCTGAATATGGTAGTCTCTACACGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAAGCTAAAGAATGGCAGCTGAATATGGTAGTCTCTACACGGTCC  700

seq1  ATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT  750

seq1  GTTTTGTTCCCACTTCTAAGGAGGGGCATAGTGTCCACACTTCAGGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTCCCACTTCTAAGGAGGGGCATAGTGTCCACACTTCAGGCTTC  800

seq1  ATTTTTCTTGAGTTTCATGTGTTTAGTAAATTGTATCTTATATCTTGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTGAGTTTCATGTGTTTAGTAAATTGTATCTTATATCTTGGGT  850

seq1  ATCCTAGGTTTTGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGGTTTTGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTG  900

seq1  AGTTCCTTTGTGAATGTGTTACCT  924
      ||||||||||||||||||||||||
seq2  AGTTCCTTTGTGAATGTGTTACCT  924