BAC Information

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BAC

Clone NameB6Ng01-322G23
Chromosome1 (Build37)
Map Location 62,712,185 - 62,744,570
singlet/doubletdoublet
Overlap genenone
Upstream genePard3b, LOC667592
Downstream geneNrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322G23.bB6Ng01-322G23.g
ACCGA111276GA111277
length1,0671,121
definitionB6Ng01-322G23.b B6Ng01-322G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,743,492 - 62,744,570)(62,712,185 - 62,713,312)
sequence
gaattctcattctcttattaaatttataggctagttttctctgggagttt
gaaccccagcatctctgagagtactttgccagaaagtacacaccctaagc
ccccctcccccgccaccccctagaattgtaagttctttgtcattgttgtt
tggtattactgctttcaaatttgtaacctgtgacttatggtgccttaatt
aggcatctacatgtcaggtgattgttacattacggtggcaagagctgcta
atttgagcatgaaagtcgtgatggaaaggcaggagtcagggagttgacct
tttctgtagagggtcctccagggtgggttaatccacacccaccaaagtca
ttagttctcactctcctccttcatatttactcctacacagtttactgagc
tgccaatcaacccttagtatcagatgagcgcactgacagggagggagggg
gtttggagcaggctggctttctgcaggactccagaacacatttacagagg
agacttcttttttcagtgtctgtactataccgtgatctgattccttttct
aaacttagaaaagagaatacattttacactttatacacatatttttaaaa
ataaattcaaatagcttgaaaagataattaatgaaaacttcaagccagct
tctcaccttttgcccatcgctgtaagtgatggagcctatggacccgttcc
atagatatcgagagtgtattccaagtggaaagcaaaggcgctttgatgtt
tttcctccagctttccctttccagttgtctctctcttcctctgccaaagc
acacagcagtaatggccttgaaaaccattagggggcagctgtgaccaaaa
aaggaaaccacaggaaaagggaagcgctagaatcttaggaggtgcaaagg
aaatgaacggaatgctaaggagggaggaaagccgaagagaaaggaaaaag
gagaaattaactaagcattacaaatcaaaggaatgggagactggcggtga
tgtataggattaaagcttaaagaagtgtgtgccacgtgtgtgtcattgtg
gagtgttgggttttgtg

gaattccttccttctttctactcccctctttccttatccccagagggatg
gaaagagaacaagacagagtttaactgagggagacaatgcaaaaggagag
gggctcccatctaaaatctgagtcactgactgtggccagtttttcatgcc
ttccttccaaaatccagaacgagagagagagagagagagagagagagaga
gagagagagagagagagagagagtccaaatactgccctgtcccaagaggg
ccggggtgccccgggacaccccatcctttagatgagtaatgcaggcttac
ttggctgatgccttactgaatcctgtcatcacagcagccaaggaaaaatt
atgtctgtatgttgtgcagagccataaatccaaagtgaggtggcattctc
agtcattccatatttcaaggcaagaaagtttgttcctacaaggctgttaa
taatcaaagtttgtttccaccaccagcctctcacagacccatccttgagc
cagagaatgtgaggcactttgggtaggattctcagtgggtggggagctga
tgccccagagtctccactcacacaacctggctgactgtaagcaggaggag
tgagggctttttggtttactgtaaccactgggattgtttaagttggctaa
gtaagatggcatgagaactacagattaagtgctgggggacctccttagct
acaggaactccatcttgtacacactccccattttgtactaagctaaagtc
taagaaatggcttctggccccaggtgtccccgatgaacctacactacaat
atcccaccctaggcttcattgcttaattttcagccaggagctcttacaac
atgcctttcaagaaaaccactggggatcaaggttcagtcccctctaccac
ataggttcccagttctgacacacacctctagtgcagcacctaggagacag
aggtcaaggctgctcttctgcctacacaggaccctgtttcaaggctggaa
gatgtgactccaggatagggagtcttaccacagctgttactgagtttggt
cccaaggacccacagctgtcctctgacttccactctaaatgtccaccgta
gcataaacattttttttaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62743492_62744570
seq2: B6Ng01-322G23.b_44_1110 (reverse)

seq1  CACAAAACACACACACTCACACACTGACACACACGT-GCACACACTTCCT  49
      |||||||| || |||||| |||| |||||||||||| ||||||||||| |
seq2  CACAAAACCCA-ACACTC-CACAATGACACACACGTGGCACACACTTCTT  48

seq1  TTAGCTTTTTAATCCTATTACATCACCGCC-GTCTCCCATTTCCTTTGAT  98
      | |||  |||||||||| |||||||||||| |||||||| ||||||||| 
seq2  TAAGC--TTTAATCCTA-TACATCACCGCCAGTCTCCCA-TTCCTTTGA-  93

seq1  TTTGTAATGCTTTAGTTAATTTTCTCCTTTTTTCCTTTTCCTCTTCGGCT  148
      |||||||||| |||||||| ||||||| ||||||||||  ||||||||| 
seq2  TTTGTAATGC-TTAGTTAA-TTTCTCC-TTTTTCCTTT--CTCTTCGGC-  137

seq1  TTTCCTCCCTCCTTAGCATTCCGTTCATTTCCTTTTGCACCTCCTAAGAT  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTCCTCCCTCCTTAGCATTCCGTTCATTTCC-TTTGCACCTCCTAAGAT  186

seq1  TCTAGCGCTTCCCTTTTCCTGTGGTTTCCTTTTTTGGTCACAGCTGCCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCGCTTCCCTTTTCCTGTGGTTTCCTTTTTTGGTCACAGCTGCCCC  236

seq1  CTAATGGTTTTCAAGGCCATTACTGCTGTGTGCTTTGGCAGAGGAAGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGTTTTCAAGGCCATTACTGCTGTGTGCTTTGGCAGAGGAAGAGA  286

seq1  GAGACAACTGGAAAGGGAAAGCTGGAGGAAAAACATCAAAGCGCCTTTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACTGGAAAGGGAAAGCTGGAGGAAAAACATCAAAGCGCCTTTGC  336

seq1  TTTCCACTTGGAATACACTCTCGATATCTATGGAACGGGTCCATAGGCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTTGGAATACACTCTCGATATCTATGGAACGGGTCCATAGGCTC  386

seq1  CATCACTTACAGCGATGGGCAAAAGGTGAGAAGCTGGCTTGAAGTTTTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTTACAGCGATGGGCAAAAGGTGAGAAGCTGGCTTGAAGTTTTCA  436

seq1  TTAATTATCTTTTCAAGCTATTTGAATTTATTTTTAAAAATATGTGTATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATCTTTTCAAGCTATTTGAATTTATTTTTAAAAATATGTGTATA  486

seq1  AAGTGTAAAATGTATTCTCTTTTCTAAGTTTAGAAAAGGAATCAGATCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAAATGTATTCTCTTTTCTAAGTTTAGAAAAGGAATCAGATCAC  536

seq1  GGTATAGTACAGACACTGAAAAAAGAAGTCTCCTCTGTAAATGTGTTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGTACAGACACTGAAAAAAGAAGTCTCCTCTGTAAATGTGTTCTG  586

seq1  GAGTCCTGCAGAAAGCCAGCCTGCTCCAAACCCCCTCCCTCCCTGTCAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTGCAGAAAGCCAGCCTGCTCCAAACCCCCTCCCTCCCTGTCAGT  636

seq1  GCGCTCATCTGATACTAAGGGTTGATTGGCAGCTCAGTAAACTGTGTAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCATCTGATACTAAGGGTTGATTGGCAGCTCAGTAAACTGTGTAGG  686

seq1  AGTAAATATGAAGGAGGAGAGTGAGAACTAATGACTTTGGTGGGTGTGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATATGAAGGAGGAGAGTGAGAACTAATGACTTTGGTGGGTGTGGA  736

seq1  TTAACCCACCCTGGAGGACCCTCTACAGAAAAGGTCAACTCCCTGACTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCACCCTGGAGGACCCTCTACAGAAAAGGTCAACTCCCTGACTCC  786

seq1  TGCCTTTCCATCACGACTTTCATGCTCAAATTAGCAGCTCTTGCCACCGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCCATCACGACTTTCATGCTCAAATTAGCAGCTCTTGCCACCGT  836

seq1  AATGTAACAATCACCTGACATGTAGATGCCTAATTAAGGCACCATAAGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAACAATCACCTGACATGTAGATGCCTAATTAAGGCACCATAAGTC  886

seq1  ACAGGTTACAAATTTGAAAGCAGTAATACCAAACAACAATGACAAAGAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTACAAATTTGAAAGCAGTAATACCAAACAACAATGACAAAGAAC  936

seq1  TTACAATTCTAGGGGGTGGCGGGGGAGGGGGGCTTAGGGTGTGTACTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTCTAGGGGGTGGCGGGGGAGGGGGGCTTAGGGTGTGTACTTTC  986

seq1  TGGCAAAGTACTCTCAGAGATGCTGGGGTTCAAACTCCCAGAGAAAACTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGTACTCTCAGAGATGCTGGGGTTCAAACTCCCAGAGAAAACTA  1036

seq1  GCCTATAAATTTAATAAGAGAATGAGAATTC  1079
      |||||||||||||||||||||||||||||||
seq2  GCCTATAAATTTAATAAGAGAATGAGAATTC  1067


seq1: chr1_62712185_62713312
seq2: B6Ng01-322G23.g_64_1184

seq1  GAATTCCTTCCTTCTTTCTACTCCCCTCTTTCCTTATCCCCAGAGGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTCTTTCTACTCCCCTCTTTCCTTATCCCCAGAGGGATG  50

seq1  GAAAGAGAACAAGACAGAGTTTAACTGAGGGAGACAATGCAAAAGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAACAAGACAGAGTTTAACTGAGGGAGACAATGCAAAAGGAGAG  100

seq1  GGGCTCCCATCTAAAATCTGAGTCACTGACTGTGGCCAGTTTTTCATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCCATCTAAAATCTGAGTCACTGACTGTGGCCAGTTTTTCATGCC  150

seq1  TTCCTTCCAAAATCCAGAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCAAAATCCAGAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200

seq1  GAGAGAGAGAGAGAGAGAGAGAGTCCAAATACTGCCCTGTCCCAAGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGTCCAAATACTGCCCTGTCCCAAGAGGG  250

seq1  CCGGGGTGCCCCGGGACACCCCATCCTTTAGATGAGTAATGCAGGCTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGTGCCCCGGGACACCCCATCCTTTAGATGAGTAATGCAGGCTTAC  300

seq1  TTGGCTGATGCCTTACTGAATCCTGTCATCACAGCAGCCAAGGAAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGATGCCTTACTGAATCCTGTCATCACAGCAGCCAAGGAAAAATT  350

seq1  ATGTCTGTATGTTGTGCAGAGCCATAAATCCAAAGTGAGGTGGCATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTATGTTGTGCAGAGCCATAAATCCAAAGTGAGGTGGCATTCTC  400

seq1  AGTCATTCCATATTTCAAGGCAAGAAAGTTTGTTCCTACAAGGCTGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCCATATTTCAAGGCAAGAAAGTTTGTTCCTACAAGGCTGTTAA  450

seq1  TAATCAAAGTTTGTTTCCACCACCAGCCTCTCACAGACCCATCCTTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAAGTTTGTTTCCACCACCAGCCTCTCACAGACCCATCCTTGAGC  500

seq1  CAGAGAATGTGAGGCACTTTGGGTAGGATTCTCAGTGGGTGGGGAGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGTGAGGCACTTTGGGTAGGATTCTCAGTGGGTGGGGAGCTGA  550

seq1  TGCCCCAGAGTCTCCACTCACACAACCTGGCTGACTGTAAGCAGGAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGAGTCTCCACTCACACAACCTGGCTGACTGTAAGCAGGAGGAG  600

seq1  TGAGGGCTTTTTGGTTTACTGTAACCACTGGGATTGTTTAAGTTGGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCTTTTTGGTTTACTGTAACCACTGGGATTGTTTAAGTTGGCTAA  650

seq1  GTAAGATGGCATGAGAACTACAGATTAAGTGCTGGGGGACCTCCTTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGGCATGAGAACTACAGATTAAGTGCTGGGGGACCTCCTTAGCT  700

seq1  ACAGGAACTCCATCTTGTACACACTCCCCATTTTGTACTAAGCTAAAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACTCCATCTTGTACACACTCCCCATTTTGTACTAAGCTAAAGTC  750

seq1  TAAGAAATGGCTTCTGGCCCCAGGTGTCCCCGATGAACCTACACTACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATGGCTTCTGGCCCCAGGTGTCCCCGATGAACCTACACTACAAT  800

seq1  ATCCCACCCTAGGCTTCATTGCTTAATTTTCAGCCAGGAGCTCTTACAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCCTAGGCTTCATTGCTTAATTTTCAGCCAGGAGCTCTTACAAC  850

seq1  ATGCCTTTCAAGAAAACCACTGGGGATCAAGGTTCAGTCCCCTCTACCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTCAAGAAAACCACTGGGGATCAAGGTTCAGTCCCCTCTACCAC  900

seq1  ATAGGTTCCCAGTTCTGACACACACCTCTAGTGCAGCACCTAGGAGACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTCCCAGTTCTGACACACACCTCTAGTGCAGCACCTAGGAGACAG  950

seq1  AGGTCAAGGCTGCCCTTCTTGCCTACACAGGACCCTGTTTCAAAGGGCTG  1000
      ||||||||||||| |||| ||||||||||||||||||||||||  |||||
seq2  AGGTCAAGGCTGCTCTTC-TGCCTACACAGGACCCTGTTTCAA--GGCTG  997

seq1  G-AGATGTGACTCCAGGATAAGGGAGTCTACCAACAAGCTTGTTAACTTG  1049
      | ||||||||||||||||| |||||||||  | || ||| |||||   ||
seq2  GAAGATGTGACTCCAGGAT-AGGGAGTCTTACCAC-AGC-TGTTA--CTG  1042

seq1  AGTTTGGTTCCCAGGACCCACAAGCTGTCCTCTGAACTCCACTCTAAATG  1099
      |||||||| || ||||||||| |||||||||||||  |||||||||||||
seq2  AGTTTGGTCCCAAGGACCCAC-AGCTGTCCTCTGACTTCCACTCTAAATG  1091

seq1  TCCACCGTAGCATAAACA-TTTTTTTAAAT  1128
      |||||||||||||||||| |||||||||||
seq2  TCCACCGTAGCATAAACATTTTTTTTAAAT  1121


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