BAC Information

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BAC

Clone NameB6Ng01-322H02
Chromosome1 (Build37)
Map Location 62,833,316 - 62,979,998
singlet/doubletdoublet
Overlap geneNrp2, LOC100043070
Upstream genePard3b, LOC667592
Downstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322H02.bB6Ng01-322H02.g
ACCGA111282GA111283
length1,1071,015
definitionB6Ng01-322H02.b B6Ng01-322H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,833,316 - 62,834,434)(62,979,001 - 62,979,998)
sequence
gaattcaaagctggtagagggagcaaggaggttcattctctgactagagt
cagggcacttgaatctcatggctgggaacagaaagggacacttcctccct
aagaaagcaactagagaacaaagcaaagtagagggaaattgggatgcttg
cctcatccaagaaaagaagcaagggctcccagcctggagcgaagggtaca
tttgtgcttttcaaatgcagcgggtttacactcgccctccacagtcagtc
tggctgctgatgctgcccaagtcctaatacttaagctcagtagctgctct
aagtgctgagtgctcctctgcagttggtggaccgcagcatgttcacagac
cctcgcccagtgcttagtcccaagggcctgtttggtgccagccgtgagag
agctgttacaccctgtctgtgctgcctaggctggaccctctaggtgacag
cattttagaaataagatccccattttatatatccaaattctccatatctt
atctccgctctcatgcatctgcctagttcctgactagagagagagatgag
cccttggcttgacacctgtataggctccctgaatccaagtcgccctgcct
aatttgccattcgtccctagctctaagaccatcaatacggaggggaaagt
ggtagaatagagctctggccggtgtatgttttgattcttatcctctctcc
tgctcccccaccacatgtggaagtattgtgcatccatgtgcacaccttgc
tgctccctggggtgtagctgtgaacgcaaagcctgacagggaaagttaag
gtgcaaacggaacagcttggactgttagagcttggcgctcaccttcctgg
tgcagcctaaggtttatgctggggaagagaagcctgctcccgactctctg
tgggttgttgagcctcaaagctccctgaaaggccagtaactgctataaaa
gctgtgctcgacccatgtctgggcgtgactgacaggaacacagctgaagg
cttcactcctctgagagataaacacaccagcgcacgtgctctccttgagt
gtgtgcggcacaggctgcccaactcaacccctgtcgctgtaaaaaaaata
taatata
gaattcctgttttcttgcggttcagttagattctgtccctgctgatcaaa
ggaagtcatttcacactctctctttgtggaggcaaatggactggagctcc
gtcatccacgacttcatcgggagcccttccacgctgatgcaaacgggggc
aatttcagtctgacctcaggatcagtatttggatgttgaagtcccttctg
gagatctcatccttggccttggttcacaggacaaatgctgatggagctca
gtcagagataatcagagtaagaaacagattgtcagggtatcccaccccag
cagcgggggccccagttctcacactctaagggccctaccccagacttcta
cctttaatattgacggatagaaatctacagactggtggtttgcatgtgct
tggtgatgatttatgtacgcctgcttctcctgtggctccaatagaagcag
tgggacacccaccctttaatgtgtggccatgacgggatgctggctttagc
tgcagttaagtggtttagcaaggtttcctgtagcatgtccagtcatgagc
cactacttcagtctgtcctagactgagacaacacaggagattgggtgtca
gcttatcatgtattcttgtgatccaagggagatgctagtgagagctgtta
gagccacggaaacactgggattgcttgctgtcagagcaaccaagtaacga
tgtgatgaatggtaccctagtcacggtaacgtggtatgtatgggtgtgtg
gaaaggcagttggttcagagcagctggagtgattgaatgagtggatgact
aggcaagaccacactgaattgtctcattcttcttctttctcccttcctcc
tcttcccctccttctttttcttcttttttcctcctcttggttccctaccc
ttcttcttccttctgaaagtttgtggtgctgtgcatgggtggcacacatc
cttagttctcatcactcaagatcttttgtgaatttgaaggccagccctgg
tctaattgagtgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62833316_62834434
seq2: B6Ng01-322H02.b_46_1152

seq1  GAATTCAAAGCTGGTAGAGGGAGCAAGGAGGTTCATTCTCTGACTAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTGGTAGAGGGAGCAAGGAGGTTCATTCTCTGACTAGAGT  50

seq1  CAGGGCACTTGAATCTCATGGCTGGGAACAGAAAGGGACACTTCCTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCACTTGAATCTCATGGCTGGGAACAGAAAGGGACACTTCCTCCCT  100

seq1  AAGAAAGCAACTAGAGAACAAAGCAAAGTAGAGGGAAATTGGGATGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCAACTAGAGAACAAAGCAAAGTAGAGGGAAATTGGGATGCTTG  150

seq1  CCTCATCCAAGAAAAGAAGCAAGGGCTCCCAGCCTGGAGCGAAGGGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCAAGAAAAGAAGCAAGGGCTCCCAGCCTGGAGCGAAGGGTACA  200

seq1  TTTGTGCTTTTCAAATGCAGCGGGTTTACACTCGCCCTCCACAGTCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTTTCAAATGCAGCGGGTTTACACTCGCCCTCCACAGTCAGTC  250

seq1  TGGCTGCTGATGCTGCCCAAGTCCTAATACTTAAGCTCAGTAGCTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGATGCTGCCCAAGTCCTAATACTTAAGCTCAGTAGCTGCTCT  300

seq1  AAGTGCTGAGTGCTCCTCTGCAGTTGGTGGACCGCAGCATGTTCACAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGAGTGCTCCTCTGCAGTTGGTGGACCGCAGCATGTTCACAGAC  350

seq1  CCTCGCCCAGTGCTTAGTCCCAAGGGCCTGTTTGGTGCCAGCCGTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCCCAGTGCTTAGTCCCAAGGGCCTGTTTGGTGCCAGCCGTGAGAG  400

seq1  AGCTGTTACACCCTGTCTGTGCTGCCTAGGCTGGACCCTCTAGGTGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTACACCCTGTCTGTGCTGCCTAGGCTGGACCCTCTAGGTGACAG  450

seq1  CATTTTAGAAATAAGATCCCCATTTTATATATCCAAATTCTCCATATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGAAATAAGATCCCCATTTTATATATCCAAATTCTCCATATCTT  500

seq1  ATCTCCGCTCTCATGCATCTGCCTAGTTCCTGACTAGAGAGAGAGATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCGCTCTCATGCATCTGCCTAGTTCCTGACTAGAGAGAGAGATGAG  550

seq1  CCCTTGGCTTGACACCTGTATAGGCTCCCTGAATCCAAGTCGCCCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCTTGACACCTGTATAGGCTCCCTGAATCCAAGTCGCCCTGCCT  600

seq1  AATTTGCCATTCGTCCCTAGCTCTAAGACCATCAATACGGAGGGGAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCCATTCGTCCCTAGCTCTAAGACCATCAATACGGAGGGGAAAGT  650

seq1  GGTAGAATAGAGCTCTGGCCGGTGTATGTTTTGATTCTTATCCTCTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAATAGAGCTCTGGCCGGTGTATGTTTTGATTCTTATCCTCTCTCC  700

seq1  TGCTCCCCCACCACATGTGGAAGTATTGTGCATCCATGTGCACACCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCCACCACATGTGGAAGTATTGTGCATCCATGTGCACACCTTGC  750

seq1  TGCTCCCTGGGGTGTAGCTGTGAACGCAAAGCCTGACAGGGAAAGTTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTGGGGTGTAGCTGTGAACGCAAAGCCTGACAGGGAAAGTTAAG  800

seq1  GTGCAAACGGAACAGCTTGGACTGTTAGAGCTTGGCGCTCACCTTCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAACGGAACAGCTTGGACTGTTAGAGCTTGGCGCTCACCTTCCTGG  850

seq1  TGCAGCCTAAGGTTTATGCTGGGGAAGAGAAGCCTGCTCCCGACTCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTAAGGTTTATGCTGGGGAAGAGAAGCCTGCTCCCGACTCTCTG  900

seq1  TGGGTTGTTGAGCCTCAAAGCTCCCTGAAAGGCCAGTAACTGCTATAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTTGAGCCTCAAAGCTCCCTGAAAGGCCAGTAACTGCTATAAAA  950

seq1  GCTGTGCTCGACCCATGTCTGGGCGTGACTGACAGGAACAACAGCTGAAG  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGTGCTCGACCCATGTCTGGGCGTGACTGACAGGAAC-ACAGCTGAAG  999

seq1  GCTTCACTCCTCTGAGAGAATAAACACACCAAGCGCACGTGCTCTCCTTG  1050
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GCTTCACTCCTCTGAGAG-ATAAACACACC-AGCGCACGTGCTCTCCTTG  1047

seq1  AAGTTGTGTGCGGCACAAGGCTGCAC-ACCCAGGCCCTGTTCGCCTGTTA  1099
      |   |||||||||||| ||||||| | || ||  ||||| ||| ||||  
seq2  A--GTGTGTGCGGCAC-AGGCTGCCCAACTCAACCCCTG-TCG-CTGT--  1090

seq1  AAAAAAAAAATATATATATA  1119
        |||||||||||| |||||
seq2  --AAAAAAAATATA-ATATA  1107

seq1: chr1_62979001_62979998
seq2: B6Ng01-322H02.g_63_1077 (reverse)

seq1  TATCACTCAA-TAGACCA-GGCTGGCC-TCAAATTCAC-AAAGATCCTGA  46
      |||||||||| ||||||| |||||||| |||||||||| ||||||| |||
seq2  TATCACTCAATTAGACCAGGGCTGGCCTTCAAATTCACAAAAGATCTTGA  50

seq1  GTGATG-GAACTAAAGATGTGTGCCA-CCATGCACAGCACCACAAACTTT  94
      |||||| ||||||| ||||||||||| |||||||||||||||||||||||
seq2  GTGATGAGAACTAAGGATGTGTGCCACCCATGCACAGCACCACAAACTTT  100

seq1  CAGAAGG-AGAAG-AGGGTAGGGAACAAAGAGGAGG-AAAAAGAAG-AAA  140
      ||||||| ||||| |||||||||||| ||||||||| ||||||||| |||
seq2  CAGAAGGAAGAAGAAGGGTAGGGAACCAAGAGGAGGAAAAAAGAAGAAAA  150

seq1  AGAAGGAGGGGAAGAGGAGG-AGGGAG-AAGAAG-AGAATGAGACAA-TC  186
      |||||||||||||||||||| |||||| |||||| |||||||||||| ||
seq2  AGAAGGAGGGGAAGAGGAGGAAGGGAGAAAGAAGAAGAATGAGACAATTC  200

seq1  AGTGTGGTCTTGCCTAGTCATCCACTCATTC-ATCACTCCAGCTGCTCTG  235
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTGTGGTCTTGCCTAGTCATCCACTCATTCAATCACTCCAGCTGCTCTG  250

seq1  AACC-ACTGCC-TTCCACACACCCATACATACCACGTTACCGTGACTAGG  283
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTGCCTTTCCACACACCCATACATACCACGTTACCGTGACTAGG  300

seq1  GTACCATTCATCACATCGTTACTTGGTTGCTCTGACAGCAAGCAATCCCA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTCATCACATCGTTACTTGGTTGCTCTGACAGCAAGCAATCCCA  350

seq1  GTGTTTCCGTGGCTCTAACAGCTCTCACTAGCATCTCCCTTGGATCACAA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCGTGGCTCTAACAGCTCTCACTAGCATCTCCCTTGGATCACAA  400

seq1  GAATACATGATAAGCTGACACCCAATCTCCTGTGTTGTCTCAGTCTAGGA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATGATAAGCTGACACCCAATCTCCTGTGTTGTCTCAGTCTAGGA  450

seq1  CAGACTGAAGTAGTGGCTCATGACTGGACATGCTACAGGAAACCTTGCTA  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGAAGTAGTGGCTCATGACTGGACATGCTACAGGAAACCTTGCTA  500

seq1  AACCACTTAACTGCAGCTAAAGCCAGCATCCCGTCATGGCCACACATTAA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTAACTGCAGCTAAAGCCAGCATCCCGTCATGGCCACACATTAA  550

seq1  AGGGTGGGTGTCCCACTGCTTCTATTGGAGCCACAGGAGAAGCAGGCGTA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGTGTCCCACTGCTTCTATTGGAGCCACAGGAGAAGCAGGCGTA  600

seq1  CATAAATCATCACCAAGCACATGCAAACCACCAGTCTGTAGATTTCTATC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATCATCACCAAGCACATGCAAACCACCAGTCTGTAGATTTCTATC  650

seq1  CGTCAATATTAAAGGTAGAAGTCTGGGGTAGGGCCCTTAGAGTGTGAGAA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAATATTAAAGGTAGAAGTCTGGGGTAGGGCCCTTAGAGTGTGAGAA  700

seq1  CTGGGGCCCCCGCTGCTGGGGTGGGATACCCTGACAATCTGTTTCTTACT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCCCCCGCTGCTGGGGTGGGATACCCTGACAATCTGTTTCTTACT  750

seq1  CTGATTATCTCTGACTGAGCTCCATCAGCATTTGTCCTGTGAACCAAGGC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATCTCTGACTGAGCTCCATCAGCATTTGTCCTGTGAACCAAGGC  800

seq1  CAAGGATGAGATCTCCAGAAGGGACTTCAACATCCAAATACTGATCCTGA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGAGATCTCCAGAAGGGACTTCAACATCCAAATACTGATCCTGA  850

seq1  GGTCAGACTGAAATTGCCCCCGTTTGCATCAGCGTGGAAGGGCTCCCGAT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGACTGAAATTGCCCCCGTTTGCATCAGCGTGGAAGGGCTCCCGAT  900

seq1  GAAGTCGTGGATGACGGAGCTCCAGTCCATTTGCCTCCACAAAGAGAGAG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCGTGGATGACGGAGCTCCAGTCCATTTGCCTCCACAAAGAGAGAG  950

seq1  TGTGAAATGACTTCCTTTGATCAGCAGGGACAGAATCTAACTGAACCGCA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATGACTTCCTTTGATCAGCAGGGACAGAATCTAACTGAACCGCA  1000

seq1  AGAAAACAGGAATTC  998
      |||||||||||||||
seq2  AGAAAACAGGAATTC  1015