BAC Information

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BAC

Clone NameB6Ng01-322L24
Chromosome1 (Build37)
Map Location 120,317,992 - 120,319,112
singlet/doubletsinglet
Overlap geneClasp1
Upstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368, LOC637083, Tsn, Mki67ip
Downstream geneTcfcp2l1, LOC100041753, Gli2, LOC666838, LOC100041778, Inhbb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322L24.bB6Ng01-322L24.g
ACCGA111512GA111513
length7561,147
definitionB6Ng01-322L24.b B6Ng01-322L24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctttaattccccagatacatttaaagaagta
ttcaacaaccttagccattagggaaatccaaatctaaacaatgctaagat
tccatcctatacctgtcagaatggctaaaatcaaagacacaagtggccat
tcatgctggcaaggatgtggagaaaggggaacacccctccactgctggtg
agtgtgaaaacttgtgcagccactttgtaaatcaatttgggtttttctca
gaaagtagtgaatcaatctacctcaagacctagctatatgaccctggaca
tatacccaaaagatgctccaccataccacaaggacacttgttcagctatg
ctcatagtgattttatttgtaatagccagaaagtggaaacaaactacatg
tccctcaatggaagaatggagaaggaaaatggggtatacttacacaatga
agtactactcagctattaaaaacaaagacatcatgaacttcacagaaaaa
ttgaggaaagtagaaatgatcatcctgagtgaggtaacacagacccagaa
agacaaatgtgtaatgtactcagttatatgtagttattagctgtaaagca
aaggataaccattctaccatccacatacccagagaaactaagtaacatga
aaggcacaaggaagttgagggtgataagtggaaacagaatatacattgtg
ggtagataaggaaaagtgactggacagggatgaggaagtaggagatggga
agagga
gaattctccagattctgcaggcagtagtgctgcttatgtgtgccttgctc
agaatcccatgtagttcatgcagccacatgctgtacctgagtagggaagc
aatcacaagttctaaccagcacccccactagacaggagccaccactaagg
agcttagtatgcagcaggcaagaaataactgagacccactctctcattca
gggctcataaaaactttattatctgactggggagacggcttaggggataa
agcgcttgccacacatgcacaaggacctgagctcagcttcccagaaccac
ataaaagctagacatggaggtgcatttataatctatgggaagatgagagg
tggaatcagaaggctctcacccagaagtgtatacgtcagctaacctgcta
tatgcaacagtagtgagcaagaagtgaccctgtcttaaaccaagggaaag
gaaggtaaggactaacacctgatgctgttctccaacctgcacacacacca
tggcatatgcacactcacatacacacaaacatgcacacacacacacacac
acacacacacacaccatggcatatgcacactcccatacacacaaacatgc
acacacacactcagatacacacacacacacacacacacacacacacacac
acacaccaaccttttaagaggctgaaacagaggcctagaggttaagagca
ttaactgattttgcaaagaacccacgtttggttccccagcatccacatgt
agctcaaaatcatctgtaactccagttcaaagagatcttgatgcccctca
tctctcctccacgggcaccatatattgtgtagtacccaaacaaacatgca
ggcaaacattcattacacaaaaataaaaaataatctttaattattaagta
aaataatttgggtaatcctgggcatgataaatggggaaacctgaagacat
ttacattgctcagtgaaacaggctccacagttgctaattaaccagcagta
ttattccagttcccacctaaacccggcctcttcctaaggacaggtccagc
ttcaaactctaagtaccttcttcaacctcaagtggaatacaactgggcct
caggggaggggaagaagcaccttttgcgagaaaacagcagttagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_120317992_120319112
seq2: B6Ng01-322L24.g_70_1216 (reverse)

seq1  TGACTTAACTGCTGTTCTCT-GC-AAAGGTGCTTCCT-CCCTCCCCTGAG  47
      |||| ||||||||||| ||| || ||||||||||| | ||||||||||||
seq2  TGAC-TAACTGCTGTTTTCTCGCAAAAGGTGCTTCTTCCCCTCCCCTGAG  49

seq1  G-CCAGTTGTATT-CACTTGA-GTTGA--GAGGTACTT-GAG-TTGAGGC  90
      | ||||||||||| ||||||| |||||   |||||||| ||| |||| ||
seq2  GCCCAGTTGTATTCCACTTGAGGTTGAAGAAGGTACTTAGAGTTTGAAGC  99

seq1  TG--ACTGTCC-TAGGAAGGGGCCGGTTTAAGGTTGGGACTGGAATAATA  137
      ||   |||||| ||||||| |||||| || |||| || ||||||||||||
seq2  TGGACCTGTCCTTAGGAAGAGGCCGGGTTTAGGTGGGAACTGGAATAATA  149

seq1  CTGCT-GTTAATTAGCAACTTGTGGAGCCTGTTTCACTGAGCAATGT-AA  185
      ||||| ||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CTGCTGGTTAATTAGCAAC-TGTGGAGCCTGTTTCACTGAGCAATGTAAA  198

seq1  TGTC-TCAGG-TTCCCCATTTATCATG-CCAGGA-TAACCAAATTA-TTT  230
      |||| ||||| |||||||||||||||| |||||| || |||||||| |||
seq2  TGTCTTCAGGTTTCCCCATTTATCATGCCCAGGATTACCCAAATTATTTT  248

seq1  AC-TAATAATTAAAGATTATTTTT--ATTTTGTGT-ATGAATGTTTGCCT  276
      || |||||||||||||||||||||   |||||||| ||||||||||||||
seq2  ACTTAATAATTAAAGATTATTTTTTATTTTTGTGTAATGAATGTTTGCCT  298

seq1  GCATGTTTGTTTGGGTACTACAC-ATATATGGTGCCCGTGGAGGAGAGAT  325
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCATGTTTGTTTGGGTACTACACAATATATGGTGCCCGTGGAGGAGAGAT  348

seq1  GA-GGGCATC-AGATCTCTTTGAACTGGAGTTACAGATGATTTTGAGCTA  373
      || ||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCATCAAGATCTCTTTGAACTGGAGTTACAGATGATTTTGAGCTA  398

seq1  CATGTGGATGCT-GGGAACCAAACGTGGGTTCTTTGCAAAATCAGTTAAT  422
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATGTGGATGCTGGGGAACCAAACGTGGGTTCTTTGCAAAATCAGTTAAT  448

seq1  GCTCTTAACCTCTAGGCCTCTGTTTCAGCCTCTTAAAAGGTTGGTGTGTG  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAACCTCTAGGCCTCTGTTTCAGCCTCTTAAAAGGTTGGTGTGTG  498

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTGAGTGTGTGTGTG  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTGAGTGTGTGTGTG  548

seq1  CATGTTTGTGTGTATGGGAGTGTGCATATGCCATGGTGTGTGTGTGTGTG  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGTGTGTATGGGAGTGTGCATATGCCATGGTGTGTGTGTGTGTG  598

seq1  TGTGTGTGTGTGTGTGCATGTTTGTGTGTATGTGAGTGTGCATATGCCAT  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGCATGTTTGTGTGTATGTGAGTGTGCATATGCCAT  648

seq1  GGTGTGTGTGCAGGTTGGAGAACAGCATCAGGTGTTAGTCCTTACCTTCC  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGTGCAGGTTGGAGAACAGCATCAGGTGTTAGTCCTTACCTTCC  698

seq1  TTTCCCTTGGTTTAAGACAGGGTCACTTCTTGCTCACTACTGTTGCATAT  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTGGTTTAAGACAGGGTCACTTCTTGCTCACTACTGTTGCATAT  748

seq1  AGCAGGTTAGCTGACGTATACACTTCTGGGTGAGAGCCTTCTGATTCCAC  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTTAGCTGACGTATACACTTCTGGGTGAGAGCCTTCTGATTCCAC  798

seq1  CTCTCATCTTCCCATAGATTATAAATGCACCTCCATGTCTAGCTTTTATG  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTTCCCATAGATTATAAATGCACCTCCATGTCTAGCTTTTATG  848

seq1  TGGTTCTGGGAAGCTGAGCTCAGGTCCTTGTGCATGTGTGGCAAGCGCTT  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGGGAAGCTGAGCTCAGGTCCTTGTGCATGTGTGGCAAGCGCTT  898

seq1  TATCCCCTAAGCCGTCTCCCCAGTCAGATAATAAAGTTTTTATGAGCCCT  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCTAAGCCGTCTCCCCAGTCAGATAATAAAGTTTTTATGAGCCCT  948

seq1  GAATGAGAGAGTGGGTCTCAGTTATTTCTTGCCTGCTGCATACTAAGCTC  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAGAGTGGGTCTCAGTTATTTCTTGCCTGCTGCATACTAAGCTC  998

seq1  CTTAGTGGTGGCTCCTGTCTAGTGGGGGTGCTGGTTAGAACTTGTGATTG  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGGTGGCTCCTGTCTAGTGGGGGTGCTGGTTAGAACTTGTGATTG  1048

seq1  CTTCCCTACTCAGGTACAGCATGTGGCTGCATGAACTACATGGGATTCTG  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTACTCAGGTACAGCATGTGGCTGCATGAACTACATGGGATTCTG  1098

seq1  AGCAAGGCACACATAAGCAGCACTACTGCCTGCAGAATCTGGAGAATTC  1121
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCACACATAAGCAGCACTACTGCCTGCAGAATCTGGAGAATTC  1147