BAC Information

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BAC

Clone NameB6Ng01-323L02
Chromosome1 (Build37)
Map Location 84,880,824 - 84,881,736
singlet/doubletsinglet
Overlap geneFbxo36
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12
Downstream geneSlc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323L02.bB6Ng01-323L02.g
ACCGA112207GA112208
length1,200911
definitionB6Ng01-323L02.b B6Ng01-323L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaagaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaacggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgaatgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
tagaatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacaaagtttggagctgagatgaaaggat
ggaccatgtagagactgccatatccagggatccaccccataatcagcatc
caaacgctgacaccattgcatacactagcaagattttattgaaaggaccc
cagatgtagctgtctcttgtgagactatgccggggcctagcaaacacaga
agtggatgctcacagtcagctaatggatggatcatagggcctccccaatg
gaggagctagaagaaaagtagccaaggagcttaaagggatcttgcaaccc
tataggtgaaacaacaattatgaatctaacaagtaccccggagctctctt
gactctagcttgcatatatatattcgaaagaatggccaagctcgcccatt
ccactgaagaaaggccatttgacttgcaaaccttataatgtccctaagta
ctggttaaaccatcagtggtctaaaaaatgggtgaaatgggcgttagcta

gaattctctcttcattatttttcctttttcttttttctcttttcttcttt
ctttctggcagagtctctgtatgtgaccttggctgtcctgaattgaacta
tgtagaccaggttggtttttaactcatagagaactacttgcctctggctc
ctaaatgcttagattacgggtgtttaagaatatgcccagccagccaggca
gtgatggcgcatgcctttaatcctagcacttgggaggcagaggcaggtgg
atttctgagtttgaggccagcctggtctacagagtgagttccaggacagc
cagggctacacagagaaaccctgtcttgaaaacaaaacaaaacaaaacaa
aaacaaaaaacaaaacaacaacaacaaaaagaatatatgcccggacttat
ttattttttagacatcatttttttaaagatttatttattattatatctat
atacactgtagctgtcttcagatgcaccagaagagagcgtcagatctcat
tacagatggttgtgagccaccatgttgctgggatttgaactcaggatctc
tggaagagcagtcggtgctcttaaccactgagccatctctccaggccgtt
tttttttttttaatttattttatttttaattacatgtgtgtgtctgtgca
tgggttttgcatgtgtgagtaccagttccaccagagtccaaaaataggcc
ttcagatcccctgtggctacagttatagatggtggccggttgtgggctgc
tgtgaaaccttttgaaatatattaacttaagagaccatgagccttcagca
accccctaggaatgccctcagatggttttagagggcatagcaggtttcct
tgcccttctaccacctcaccttgctgcttgctgtgcccacacttgcctga
tggtcccccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84880824_84881736
seq2: B6Ng01-323L02.g_68_978

seq1  GAATTCTCTCTTCATTATTTTTCCTTTTTCTTTTTTCTCTTTTCTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTCATTATTTTTCCTTTTTCTTTTTTCTCTTTTCTTCTTT  50

seq1  CTTTCTGGCAGAGTCTCTGTATGTGACCTTGGCTGTCCTGAATTGAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGCAGAGTCTCTGTATGTGACCTTGGCTGTCCTGAATTGAACTA  100

seq1  TGTAGACCAGGTTGGTTTTTAACTCATAGAGAACTACTTGCCTCTGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGTTGGTTTTTAACTCATAGAGAACTACTTGCCTCTGGCTC  150

seq1  CTAAATGCTTAGATTACGGGTGTTTAAGAATATGCCCAGCCAGCCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCTTAGATTACGGGTGTTTAAGAATATGCCCAGCCAGCCAGGCA  200

seq1  GTGATGGCGCATGCCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCGCATGCCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGTGG  250

seq1  ATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  300

seq1  CAGGGCTACACAGAGAAACCCTGTCTTGAAAACAAAACAAAACAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACACAGAGAAACCCTGTCTTGAAAACAAAACAAAACAAAACAA  350

seq1  AAACAAAAAACAAAACAACAACAACAAAAAGAATATATGCCCGGACTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAAAACAACAACAACAAAAAGAATATATGCCCGGACTTAT  400

seq1  TTATTTTTTAGACATCATTTTTTTAAAGATTTATTTATTATTATATCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAGACATCATTTTTTTAAAGATTTATTTATTATTATATCTAT  450

seq1  ATACACTGTAGCTGTCTTCAGATGCACCAGAAGAGAGCGTCAGATCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGTAGCTGTCTTCAGATGCACCAGAAGAGAGCGTCAGATCTCAT  500

seq1  TACAGATGGTTGTGAGCCACCATGTTGCTGGGATTTGAACTCAGGATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGGTTGTGAGCCACCATGTTGCTGGGATTTGAACTCAGGATCTC  550

seq1  TGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGGCCGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGGCCGTT  600

seq1  TTTTTTTTTTTAATTTATTTTATTTTTAATTACATGTGTGTGTCTGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAATTTATTTTATTTTTAATTACATGTGTGTGTCTGTGCA  650

seq1  TGGGTTTTGCATGTGTGAGTACCAGTTCCACCAGAGTCCAAAAATAGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTGCATGTGTGAGTACCAGTTCCACCAGAGTCCAAAAATAGGCC  700

seq1  TTCAGATCCCCTGTGGCTACAGTTATAGATGGTGGCCGGTTGTGGGCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCCCCTGTGGCTACAGTTATAGATGGTGGCCGGTTGTGGGCTGC  750

seq1  TGTGAAACCTTTTGAAATATATTAACTTAAGAGACCATGAGCCTTCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAACCTTTTGAAATATATTAACTTAAGAGACCATGAGCCTTCAGCA  800

seq1  ACCCCCTAGGAATGCCCTCAGATGGTTTTAGAGGGCATAGCAGGGTTTCC  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCCCCTAGGAATGCCCTCAGATGGTTTTAGAGGGCATAGCA-GGTTTCC  849

seq1  TTGCCCTTCTACCACCTCACCTTGCTGCTTGCTGTTGCCCACACTTGCCT  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGCCCTTCTACCACCTCACCTTGCTGCTTGCTG-TGCCCACACTTGCCT  898

seq1  GATGGTCCCCCCA  913
      |||||||||||||
seq2  GATGGTCCCCCCA  911