BAC Information

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BAC

Clone NameB6Ng01-324K06
Chromosome1 (Build37)
Map Location 168,565,216 - 168,566,231
singlet/doubletsinglet
Overlap geneEG226604
Upstream geneRcsd1, Creg1, Cd247, Pou2f1, LOC665409, Dusp27, Gpa33, Mael, LOC100039795, Tada1l, Pogk, LOC100040287, EG226601
Downstream gene4831428F09Rik, LOC240895, LOC622102, C030014K22Rik, Uck2, LOC100039844, Tmco1, Aldh9a1, Mgst3, Lrrc52, Rxrg
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324K06.bB6Ng01-324K06.g
ACCGA112901GA112902
length9951,187
definitionB6Ng01-324K06.b B6Ng01-324K06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgcatcaagagatgagtatacaacttctttataaaaatgtat
tagcataggcaaatctatggaaaatattgtgtaacatcaacaatttttat
tctgtttcccagcatcctcaaaaggcaatatagaccattaataaacaact
ggttgtctaattcagaactaaactgtgatactttttcagtctcataccca
tagagaaaccatggacaagccatggaacattttatttcactttcctaatt
gtagaactgcaagaatgttataacaccagatcagatttgttaatacatac
taaatacctttagataatgatattttttcaaggaataaagtatgttagtc
atgtattgagtcaggaactcactatatagccctggatgtcctggaactca
ctttaactattctttaacatgaccgaggtctacatacctttccatcccaa
gtgactggattaaatgtatgttcatttttgctgtatttatctattcttga
tactatgtagaaatcattcttactgataagtgggtattagcccagaaaca
tagaacacccaagataaaatttgtaaaacattagtaaaccaagaagcgga
aagaccaatggctggatacttcatcctccttacaatagggaacaaaatac
ccatgaaaaggagttacagagacaaagtttgaagctaagaagaaaggatg
gactatccagagactaccccacccagggatccatcccacaatcagccacc
aaacccagatagacactattgcatattccagaaagattttgctgaaggga
tcctgttatagctgtctcatatgagctatgccagtgctggcaaatacaga
agtggatgctcacagtcatctataaagatgagacagggcccatgagaagc
tagagaaagcacccaagagctgagtctcaccttataggtggaacaacaat
atgactacagtaccagagcttgtattcctagatgccatgtagcag

gaattctgtttagctctgtaccccatttttcaattgggttatttgggttt
cagcctctagcttctagagttctttatatattttggatattagctctctg
tcagacgtaaggttagtgaagaacttttctcagtctataggctgtcattt
tgtcctgatgatagtgtgctttgacttacaggagattttcagtgtcatat
ggtctcatttgtcaattgttgaccctagtgcctgagacattgatgttctg
ttcagaaagttgtttcctgcattgacaagttcaaagctattcctcatgtt
ctgtttattagatttagtgtatctggttttacattgaggcattgaggtct
ttgatatatttggactgagttttatacaggttgagaaatatggatctgtt
tgcaatcttctacatgcagacatgcagttagaccagctccatctgctgaa
gatgctttcccttttccattacatggtttggcttctttgtcaaaaatcaa
gcatccaaacatgtgtgggttcatttctgggtctttgattcgatcccatt
gacctacccacctgtttctataccaacaccatgcagtttttactcctact
gcttggtagtacagtttgaagtcagggatagcgatacctccagaagttgt
tttttgttcttctgttttgttttttgtttttttttttattgttcaggatt
atttcagctatcctgggattttttgtttttccatatgaagttgagaatta
ttttttccaagatctgtgaggaactatgttggaattttgatgggaaatgc
attgaatctgtagattgcttttggcaagatggccattttcataatgctaa
tcctaccaacccatgtgcatgggaagtctttctaccttctgatatctttc
tcaatttctttcttcagatatttgaagttctgtcatacagtctttcactt
gcttggttagagctacacacatgtattttatgttatttgtggttattgtg
aaggttactggtccctaacttctttctcaagaaccatttatcactttgtg
tagagaaagctactatatttctttcagttatttgtatcccagcctccttg
ttgagtgtttatcaactgcaggagtctccttgtgatatggtcacttatta
ttatctatcacctcgggaaatctgggatacctgtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_168565216_168566231
seq2: B6Ng01-324K06.b_46_1040

seq1  GAATTCTGTGCATCAAGAGATGAGTATACAACTTCTTTATAAAAATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCATCAAGAGATGAGTATACAACTTCTTTATAAAAATGTAT  50

seq1  TAGCATAGGCAAATCTATGGAAAATATTGTGTAACATCAACAATTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAGGCAAATCTATGGAAAATATTGTGTAACATCAACAATTTTTAT  100

seq1  TCTGTTTCCCAGCATCCTCAAAAGGCAATATAGACCATTAATAAACAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCCCAGCATCCTCAAAAGGCAATATAGACCATTAATAAACAACT  150

seq1  GGTTGTCTAATTCAGAACTAAACTGTGATACTTTTTCAGTCTCATACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTAATTCAGAACTAAACTGTGATACTTTTTCAGTCTCATACCCA  200

seq1  TAGAGAAACCATGGACAAGCCATGGAACATTTTATTTCACTTTCCTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAACCATGGACAAGCCATGGAACATTTTATTTCACTTTCCTAATT  250

seq1  GTAGAACTGCAAGAATGTTATAACACCAGATCAGATTTGTTAATACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACTGCAAGAATGTTATAACACCAGATCAGATTTGTTAATACATAC  300

seq1  TAAATACCTTTAGATAATGATATTTTTTCAAGGAATAAAGTATGTTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCTTTAGATAATGATATTTTTTCAAGGAATAAAGTATGTTAGTC  350

seq1  ATGTATTGAGTCAGGAACTCACTATATAGCCCTGGATGTCCTGGAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGAGTCAGGAACTCACTATATAGCCCTGGATGTCCTGGAACTCA  400

seq1  CTTTAACTATTCTTTAACATGACCGAGGTCTACATACCTTTCCATCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACTATTCTTTAACATGACCGAGGTCTACATACCTTTCCATCCCAA  450

seq1  GTGACTGGATTAAATGTATGTTCATTTTTGCTGTATTTATCTATTCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGGATTAAATGTATGTTCATTTTTGCTGTATTTATCTATTCTTGA  500

seq1  TACTATGTAGAAATCATTCTTACTGATAAGTGGGTATTAGCCCAGAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTAGAAATCATTCTTACTGATAAGTGGGTATTAGCCCAGAAACA  550

seq1  TAGAACACCCAAGATAAAATTTGTAAAACATTAGTAAACCAAGAAGCGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACCCAAGATAAAATTTGTAAAACATTAGTAAACCAAGAAGCGGA  600

seq1  AAGACCAATGGCTGGATACTTCATCCTCCTTACAATAGGGAACAAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAATGGCTGGATACTTCATCCTCCTTACAATAGGGAACAAAATAC  650

seq1  CCATGAAAAGGAGTTACAGAGACAAAGTTTGAAGCTAAGAAGAAAGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAAAGGAGTTACAGAGACAAAGTTTGAAGCTAAGAAGAAAGGATG  700

seq1  GACTATCCAGAGACTACCCCACCCAGGGATCCATCCCACAATCAGCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATCCAGAGACTACCCCACCCAGGGATCCATCCCACAATCAGCCACC  750

seq1  AAACCCAGATAGACACTATTGCATATTCCAGAAAGATTTTGCTGAAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGATAGACACTATTGCATATTCCAGAAAGATTTTGCTGAAGGGA  800

seq1  TCCTGTTATAGCTGTCTCATATGAGGCTATGCCAGTGCTTGGCAAATACA  850
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  TCCTGTTATAGCTGTCTCATATGA-GCTATGCCAGTGC-TGGCAAATACA  848

seq1  GAAGTGGATGCTCACAGTCATCTAT-AAGATGGAAGACAGGGCCCCCAAT  899
      ||||||||||||||||||||||||| ||||||  |||||||||||   ||
seq2  GAAGTGGATGCTCACAGTCATCTATAAAGATG--AGACAGGGCCC---AT  893

seq1  GGAGAAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGTTCTTCAACCCTAT  949
       ||||||||||||||||||||||| |||||||     |||   ||| |||
seq2  -GAGAAGCTAGAGAAAGCACCCAA-GAGCTGA----GTCT--CACCTTAT  935

seq1  AGGTGGAACAACAATATGAACTAACCAGTACCCAAAGAGCTTGTATCTCT  999
      |||||||||||||||||| ||||  |||||||   |||||||||||  ||
seq2  AGGTGGAACAACAATATG-ACTA--CAGTACC---AGAGCTTGTATTCCT  979

seq1  AGATGCATATGTAGCAG  1016
      ||||||  |||||||||
seq2  AGATGC-CATGTAGCAG  995


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