BAC Information

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BAC

Clone NameB6Ng01-325L21
Chromosome1 (Build37)
Map Location 31,204,223 - 31,394,535
singlet/doubletdoublet
Overlap gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream geneLOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325L21.bB6Ng01-325L21.g
ACCGA113722GA113723
length7521,116
definitionB6Ng01-325L21.b B6Ng01-325L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,204,223 - 31,204,972)(31,393,725 - 31,394,535)
sequence
gaattccaccttgtagcatgcaggttatccaaggcatcctagcttatcca
atgcaaacagtggaccaaacatagtttcccacctgtagtgagtggttgga
tggcaagtgtggggtttttggggtgaaggaaagtggaacattatgaaagc
catggagtgttttaggctcaggaactgcaagaccaggaaggagactaaca
ttgtcaactgtggacaatggcaatgtgtttgattgtagttaccgtctgta
tgtagtcccagagtacctatggtgagaaggcaggccgagacagaaatacc
ccagaagcttacaggtcagaacaactgtaactcaagtcagagatgcccct
tcccacaaggacagtgactgactttatcctctgatctccacatgtatgct
gtgccacatgcatacatggtacacacacataataaacacggacaggtgga
ccaagccagctcagtcagtcaacaaggtctcaagggagggagtgagggtt
gaaaaagaaagacagacaaaatgatcacgtgtctccagccagtgctgagg
ctgagactgctttctgtctctgcagcctgcttttatatcatcctaggtcc
ttccaaaacacacggtcagtttcttagatcaaagccaaagtcaagtgaaa
gtagtgaacaaggaggtcacacaagataataatgaagtaaagcattaagc
aaagagatcacataaggtagtgatctataaaaatccagcaaagcagtaaa
ca
gaattcctatctaacactggatgacctagaaccagagataaggtagttca
gagacctaggataaaaccaaatagtactggtccaaatatataacaataaa
atgactcctgatgatattctgctgtactcatagattgctgctttattcag
ccaatatcagagagtcttccctctgcagtagatgggcaaaacatgcaggt
gtgttttgcacagagagagagagagagacagagacagacagagaaagaga
gagagtttgggtctaaatgaaatcccccacccacccccacacacaccccc
tgactccaccaccagctcagggaactccagagaagaggaggcagacaaag
tgtggaggatgtagggcaccaagaaacaaggccatcttaattaattaagc
aaatttcatgtgaactcacagagactgaagcagcaagcacagggcttact
tgggtccacaccaggttcgctgcatacaaagtggggcttcagtttagtat
ttttacgggactcctgaacatgtgaataagtgggtccctgattcttattc
cttctccttgggttctttcttgtctgatggtttgccttgtacaacttcga
agtgatggttttgttatccttttatatttttctttgtttaaattaaaaaa
aaaaaaaaatcttttagacaatgcctgcccaccagatggagccaaataca
actactgtaggacatttgaagcacgttcaactagaactcaaggttgtttt
agactctaggttgttcaaatggattcatctcatcgatcttacaatatgct
tgatgattggctagtataacatccaacctacttaggggaacacagccctc
tcatgtatttgatgtttatgaaatacaacacaaaataattgggcagaagg
gattagggcactttaaaagggtttctttccaaagtgtgccgcaagtgaat
attggagaagggtctacaccatgcatgcgtatttcccttgctcccagtat
ttacatttcgaaatcatgtagcagaaggcctgaccattcttaaaggaaaa
gacgcctgttgctttaagccatgatattttcaattccactaattaacatt
tgccctaagaattttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31204223_31204972
seq2: B6Ng01-325L21.b_45_796

seq1  GAATTCCACCTTGTAGCATGCAGGTTATCCAAGGCATCCTAGCTTATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTGTAGCATGCAGGTTATCCAAGGCATCCTAGCTTATCCA  50

seq1  ATGCAAACAGTGGACCAAACATAGTTTCCCACCTGTAGTGAGTGGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACAGTGGACCAAACATAGTTTCCCACCTGTAGTGAGTGGTTGGA  100

seq1  TGGCAAGTGTGGGGTTTTTGGGGTGAAGGAAAGTGGAACATTATGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTGTGGGGTTTTTGGGGTGAAGGAAAGTGGAACATTATGAAAGC  150

seq1  CATGGAGTGTTTTAGGCTCAGGAACTGCAAGACCAGGAAGGAGACTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTGTTTTAGGCTCAGGAACTGCAAGACCAGGAAGGAGACTAACA  200

seq1  TTGTCAACTGTGGACAATGGCAATGTGTTTGATTGTAGTTACCGTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACTGTGGACAATGGCAATGTGTTTGATTGTAGTTACCGTCTGTA  250

seq1  TGTAGTCCCAGAGTACCTATGGTGAGAAGGCAGGCCGAGACAGAAATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCCCAGAGTACCTATGGTGAGAAGGCAGGCCGAGACAGAAATACC  300

seq1  CCAGAAGCTTACAGGTCAGAACAACTGTAACTCAAGTCAGAGATGCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGCTTACAGGTCAGAACAACTGTAACTCAAGTCAGAGATGCCCCT  350

seq1  TCCCACAAGGACAGTGACTGACTTTATCCTCTGATCTCCACATGTATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAAGGACAGTGACTGACTTTATCCTCTGATCTCCACATGTATGCT  400

seq1  GTGCCACATGCATACATGGTACACACACATAATAAACACGGACAGGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACATGCATACATGGTACACACACATAATAAACACGGACAGGTGGA  450

seq1  CCAAGCCAGCTCAGTCAGTCAACAAGGTCTCAAGGGAGGGAGTGAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCAGCTCAGTCAGTCAACAAGGTCTCAAGGGAGGGAGTGAGGGTT  500

seq1  GAAAAAGAAAGACAGACAAAATGATCACGTGTCTCCAGCCAGTGCTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAAGACAGACAAAATGATCACGTGTCTCCAGCCAGTGCTGAGG  550

seq1  CTGAGACTGCTTTCTGTCTCTGCAGCCTGCTTTTATATCATCCTAGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTGCTTTCTGTCTCTGCAGCCTGCTTTTATATCATCCTAGGTCC  600

seq1  TTCCAAAACACACGGTCAG-TTCTTAGATCAAAGCCAAAGTCAAGTG-AA  648
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  TTCCAAAACACACGGTCAGTTTCTTAGATCAAAGCCAAAGTCAAGTGAAA  650

seq1  GTAGTGAACAAGGAGGTCACACAAGATAATAATGAAGTAAAGCAGTAAGC  698
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTAGTGAACAAGGAGGTCACACAAGATAATAATGAAGTAAAGCATTAAGC  700

seq1  AAAGAGATCACATAAGGTAGTGATCTATAAAAATCCAGCAAAGCAGTAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATCACATAAGGTAGTGATCTATAAAAATCCAGCAAAGCAGTAAA  750

seq1  CA  750
      ||
seq2  CA  752

seq1: chr1_31393725_31394535
seq2: B6Ng01-325L21.g_364_1186 (reverse)

seq1  GAAAATTTCTTTAGGAAAATGTTAATTAGTGGGAATTGAAAATA-CATGG  49
      ||||| |||||  || |||||||||||||| ||||||||||||| |||||
seq2  GAAAA-TTCTTAGGGCAAATGTTAATTAGT-GGAATTGAAAATATCATGG  48

seq1  CTTAAAGCAATTAGCGTCTTTT-CTCTAAGAATTGTCAAGGCCTTCTGCT  98
      ||||||||||   ||||||||| || ||||||| ||| ||||||||||||
seq2  CTTAAAGCAACAGGCGTCTTTTCCTTTAAGAATGGTC-AGGCCTTCTGCT  97

seq1  ACATTATTTCTGAATGTAAAT-CTTGGAGCAAGGG-AATACGGAATGCAT  146
      |||| |||||  ||||||||| || |||||||||| ||||| | ||||||
seq2  ACATGATTTCGAAATGTAAATACTGGGAGCAAGGGAAATAC-GCATGCAT  146

seq1  GGTGTAAGACCCTTCT-CAATA-TCACTCTGCGGCACACTTTGG-AAGAA  193
      ||||| |||||||||| ||||| ||||| ||||||||||||||| |||||
seq2  GGTGT-AGACCCTTCTCCAATATTCACT-TGCGGCACACTTTGGAAAGAA  194

seq1  ACCTTTTT--AGTG-CCTATTCCCTTCTG-CCAATTATTTTGTGTTGTAT  239
      ||| ||||  |||| |||| ||||||||| ||||||||||||||||||||
seq2  ACCCTTTTAAAGTGCCCTAATCCCTTCTGCCCAATTATTTTGTGTTGTAT  244

seq1  TTCAT-AACATCAACTACATGAGAGGACTGTGT--CCCTAAGTAGGTT-G  285
      ||||| |||||||| ||||||||||| ||||||  ||||||||||||| |
seq2  TTCATAAACATCAAATACATGAGAGGGCTGTGTTCCCCTAAGTAGGTTGG  294

seq1  ATGTTATACTAGCCAATCATCAAGCATATTGTAAGATCGATGAGATGAAT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATACTAGCCAATCATCAAGCATATTGTAAGATCGATGAGATGAAT  344

seq1  CCATTTGAACAACCTAGAGTCTAAAACAACCTTGAGTTCTAGTTGAACGT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGAACAACCTAGAGTCTAAAACAACCTTGAGTTCTAGTTGAACGT  394

seq1  GCTTC-AATGTCCTACAGTAGTTGTATTTGGCTCCATCTGGT-GGCAGGC  433
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  GCTTCAAATGTCCTACAGTAGTTGTATTTGGCTCCATCTGGTGGGCAGGC  444

seq1  ATTGTCTAAAAGATTTTTTTTTTTTTTTAATTTAAACAAAG-AAAATATA  482
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTGTCTAAAAGATTTTTTTTTTTTTTTAATTTAAACAAAGAAAAATATA  494

seq1  AAAGGATAACAAAACCATCACTTCGAAGTTGTACAAGGCAAACCATCAGA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATAACAAAACCATCACTTCGAAGTTGTACAAGGCAAACCATCAGA  544

seq1  CAAGAAAGAACCCAAGGAGAAGGAATAAGAATCAGGGACCCACTTATTCA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGAACCCAAGGAGAAGGAATAAGAATCAGGGACCCACTTATTCA  594

seq1  CATGTTCAGGAGTCCCGTAAAAATACTAAACTGAAGCCCCACTTTGTATG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCAGGAGTCCCGTAAAAATACTAAACTGAAGCCCCACTTTGTATG  644

seq1  CAGCGAACCTGGTGTGGACCCAAGTAAGCCCTGTGCTTGCTGCTTCAGTC  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGAACCTGGTGTGGACCCAAGTAAGCCCTGTGCTTGCTGCTTCAGTC  694

seq1  TCTGTGAGTTCACATGAAATTTGCTTAATTAATTAAGATGGCCTTGTTTC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGTTCACATGAAATTTGCTTAATTAATTAAGATGGCCTTGTTTC  744

seq1  TTGGTGCCCTACATCCTCCACACTTTGTCTGCCTCCTCTTCTCTGGAGTT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCCCTACATCCTCCACACTTTGTCTGCCTCCTCTTCTCTGGAGTT  794

seq1  CCCTGAGCTGGTGGTGGAGTCAGGGGGTG  811
      |||||||||||||||||||||||||||||
seq2  CCCTGAGCTGGTGGTGGAGTCAGGGGGTG  823