BAC Information

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BAC

Clone NameB6Ng01-328A07
Chromosome1 (Build37)
Map Location 81,250,835 - 81,252,034
singlet/doubletsinglet
Overlap gene9430031J16Rik
Upstream geneCul3, EG620899, 1700016L21Rik, Dock10, LOC665092
Downstream geneEG621020, LOC433328, EG665145, Irs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328A07.bB6Ng01-328A07.g
ACCGA115391GA115392
length1,2551,178
definitionB6Ng01-328A07.b B6Ng01-328A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgaagaactgagtgggagaatctgtagattgcttttgttaag
atggccattttcactatgttaatcctatgtatccatgagcatgggagatc
ttttcttttcatcttctcatatgttcctcaattttgttcttcagagacct
gattttttttgtttttccttcttttttattagataatctttatttatatt
tcaaatgttatcccttttcctagtttcccccctccctgaaaattccctct
cccactctccccctgctccccaacacacacactgtcattcctagtcctgg
catttccctatactggggcatagagccttcacaggaccaagggcctctct
ttccattgatgcccaagtaggccaatctatcccacaaatatagctagagc
cataagttccaccatgtgttttctttgattggtggtatagttcccaggac
ttctgagggtactggttagttcatattggtgttccttctatgggcttcag
tccccttcagctccctgggtatttctctggctccttcattgaggaccttg
tgctctgtccaataaatgactgtgagcatcagggttagagacttgaagtt
cttgtcaaacaggtctttcacttgcttaaaccacatgatattggcataga
aacagacaggttgattaatggaatagaatctaaaacccagaaataaaccc
aaaaacctatggtcacttgatttttgacaaagaagccaaagctatatagt
tgaaaaaagaatcttcaaaaagtggtgttggtctaactatatacaaatag
atccgtatatttcctcacacaaaactcaagttcaagtagatcaaagacct
caacataaacctggatacactaaatcaaatagaagagaaactggggaatt
gccttgaacacattggcctaggcacaataacttcctgaacagaataccaa
cagatcagcactagatcacaattaataaatgagacctcaggaaagcttct
gtaagcaaaggacaccattaataggacaaatgacagcctacaaatgggaa
aagattcttcacacatacatcttgacagagacctatatcttaattataga
ctagtagtgacaccaaaaacccaaataactcataaatgggccaaaacata
ccgaaatctcttatggcaagactaagaatttcaatacttgactcagatgg
atcgaacctgaattcactgatcttcggaatgtttagaatcacaaaacatc
agtga

gaattcaatggagagcttcaaagaactggtaaacagctgacatttaaggg
agccagctcgtaatctgtgttgctgttaaatatgtttccctggcttaggt
tatcagatctctcctccctatcttcttccctcccccaaccccctttcatc
tcctcccgttacttttctcccacccctcatccctctgcctttccttcatg
ctactctaacacccaagaaggctacagtaactgtggagtcctagaagcga
agtcatgccacaattatgggtcccccgggagtagtgagctcagagacata
tggtttctaattaagtctgatgctgaaggcgaacaagagtctaagccctc
tgctcctttcacataaccatatcacaggtgaatttcagctatttagtgtc
ccaaggtcttcagagtaggaacaagatcagcactagctagatggagaagt
aatggtccttcttgactaaggagtaaatagagtcaaaatcaaagcaggag
ctctcttataggggagcatgtaaggttcccattaaagggcaatgagcact
cacacagagggttagtatgaaactctttgcttagatcctggagtttagcc
tccttctaaacttcatcgtaatgaatctagattgagagactcatagggaa
aagagggaaattcagctactaagcccatctatgaaaggagtcttcaaagg
cccagtgatttctgttatagctgaaaggcaaacatcaaaggtaggaatca
gctttattgcttgtcatttgtttatgctaatcctatgacccacataagta
caagtacacatgtctatatactgtggtaaattctaaggaatattcaactt
atgattttaatagttttaagtatataattggataccagtcagtaaattac
cacagtatgcaaccatcaacattgaacatctccagagatatttttgctgt
tacgctggtgatgtgtgttgttgtgtgctgctgctgctgctgctgctgtg
ctgcttcatctatctgtcttctgaactgaaactctacttcacaaaacagt
aaccactagtcttgtctgacatgattccatatgtctggtttttcagaacc
atctggcttaactcaaataatgtaccacacaatttttttttactctggct
gaaatactttgcctcagctcagtcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81250835_81252034
seq2: B6Ng01-328A07.g_64_1241

seq1  GAATTCAATGGAGAGCTTCAAAGAACTGGTAAACAGCTGACATTTAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAGAGCTTCAAAGAACTGGTAAACAGCTGACATTTAAGGG  50

seq1  AGCCAGCTCGTAATCTGTGTTGCTGTTAAATATGTTTCCCTGGCTTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTCGTAATCTGTGTTGCTGTTAAATATGTTTCCCTGGCTTAGGT  100

seq1  TATCAGATCTCTCCTCCCTATCTTCTTCCCTCCCCCAACCCCCTTTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATCTCTCCTCCCTATCTTCTTCCCTCCCCCAACCCCCTTTCATC  150

seq1  TCCTCCCGTTACTTTTCTCCCACCCCTCATCCCTCTGCCTTTCCTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCGTTACTTTTCTCCCACCCCTCATCCCTCTGCCTTTCCTTCATG  200

seq1  CTACTCTAACACCCAAGAAGGCTACAGTAACTGTGGAGTCCTAGAAGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTAACACCCAAGAAGGCTACAGTAACTGTGGAGTCCTAGAAGCGA  250

seq1  AGTCATGCCACAATTATGGGTCCCCCGGGAGTAGTGAGCTCAGAGACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGCCACAATTATGGGTCCCCCGGGAGTAGTGAGCTCAGAGACATA  300

seq1  TGGTTTCTAATTAAGTCTGATGCTGAAGGCGAACAAGAGTCTAAGCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTAATTAAGTCTGATGCTGAAGGCGAACAAGAGTCTAAGCCCTC  350

seq1  TGCTCCTTTCACATAACCATATCACAGGTGAATTTCAGCTATTTAGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTTCACATAACCATATCACAGGTGAATTTCAGCTATTTAGTGTC  400

seq1  CCAAGGTCTTCAGAGTAGGAACAAGATCAGCACTAGCTAGATGGAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTCTTCAGAGTAGGAACAAGATCAGCACTAGCTAGATGGAGAAGT  450

seq1  AATGGTCCTTCTTGACTAAGGAGTAAATAGAGTCAAAATCAAAGCAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCCTTCTTGACTAAGGAGTAAATAGAGTCAAAATCAAAGCAGGAG  500

seq1  CTCTCTTATAGGGGAGCATGTAAGGTTCCCATTAAAGGGCAATGAGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTATAGGGGAGCATGTAAGGTTCCCATTAAAGGGCAATGAGCACT  550

seq1  CACACAGAGGGTTAGTATGAAACTCTTTGCTTAGATCCTGGAGTTTAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGGGTTAGTATGAAACTCTTTGCTTAGATCCTGGAGTTTAGCC  600

seq1  TCCTTCTAAACTTCATCGTAATGAATCTAGATTGAGAGACTCATAGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTAAACTTCATCGTAATGAATCTAGATTGAGAGACTCATAGGGAA  650

seq1  AAGAGGGAAATTCAGCTACTAAGCCCATCTATGAAAGGAGTCTTCAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAAATTCAGCTACTAAGCCCATCTATGAAAGGAGTCTTCAAAGG  700

seq1  CCCAGTGATTTCTGTTATAGCTGAAAGGCAAACATCAAAGGTAGGAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGATTTCTGTTATAGCTGAAAGGCAAACATCAAAGGTAGGAATCA  750

seq1  GCTTTATTGCTTGTCATTTGTTTATGCTAATCCTATGACCCACATAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTGCTTGTCATTTGTTTATGCTAATCCTATGACCCACATAAGTA  800

seq1  CAAGTACACATGTCTATATACTGTGGTAAATTCTAAGGAATATTCAACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACACATGTCTATATACTGTGGTAAATTCTAAGGAATATTCAACTT  850

seq1  ATGATTTTAATAGTTTTAAGTATATAATTGGATACCAGTCAGTAAATTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAATAGTTTTAAGTATATAATTGGATACCAGTCAGTAAATTAC  900

seq1  CACAGTATGCAACCATCAACATTGAACATCTCCAGAGATATTTTTGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATGCAACCATCAACATTGAACATCTCCAGAGATATTTTTGCTGT  950

seq1  TACGGCTGGTGATGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTG  1000
      ||| |||||||||||   |||||||||   ||||||||||||||||||||
seq2  TAC-GCTGGTGATGT--GTGTTGTTGT--GTGCTGCTGCTGCTGCTGCTG  995

seq1  CTGTTGCTGCTTTCATCTTATTCTTGTTCTTTCTGAACTGAAACTCTACT  1050
      ||| |||||| |||||| |||   |||   ||||||||||||||||||||
seq2  CTG-TGCTGC-TTCATC-TAT--CTGT--CTTCTGAACTGAAACTCTACT  1038

seq1  TCACAAAACAGTAACCACTAGTCTTGTCTTGACATGATTCCAATAATTGT  1100
      |||||||||||||||||||||||||||| |||||||||||| |||  || 
seq2  TCACAAAACAGTAACCACTAGTCTTGTC-TGACATGATTCC-ATA--TG-  1083

seq1  TCTGGTTTTTCAGACCATTCTGGC-TAACTCAAATAAATGTAACCACACA  1149
      |||||||||||||| |  |||||| |||||||||| ||||| ||||||||
seq2  TCTGGTTTTTCAGAACCATCTGGCTTAACTCAAAT-AATGT-ACCACACA  1131

seq1  TTTTTTTTTTCCTTCTGTGCCTGAAATACTTTG-CTCAGCTCAATGTCTT  1198
       ||||||||   | || || ||||||||||||| |||||||||  |||||
seq2  ATTTTTTTT---TACTCTGGCTGAAATACTTTGCCTCAGCTCA--GTCTT  1176

seq1  CC  1200
      ||
seq2  CC  1178


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