BAC Information

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BAC

Clone NameB6Ng01-328D09
Chromosome1 (Build37)
Map Location 104,920,871 - 104,922,021
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041056, LOC100041067
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D09.bB6Ng01-328D09.g
ACCGA115537GA115538
length1,1651,149
definitionB6Ng01-328D09.b B6Ng01-328D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tgcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgcggggaaagaggaacactactccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacccgaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaaccctgat
gcccctcaatagaggaatggatacagaaaatgtggtacatctacataatg
gcgtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggtgggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtattcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatccctctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcaggggtctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtacccaaggagctaaaggggtctgcaacccta
taggtggaacatatatgaactattaccctggagctcttgactctagctgc
atatgtatcaaaagatggcctagtcggcgatcactgaagagaggcccatt
ggactgcaaactttatatgcctcagtacaaggggacgccagggccaaaaa
ggaatgggggggggt

gaattcattatctcccactttggttgtctctaaacctgtgtctgcctcag
ggatctaggtaaattgctccttgagtctggagcagaattacagtttcatt
tgcatcactttaatttaaaatgcataactgatctctcctttgtgctcaga
tgtaggatatgagctctggatttaggcaaatctgattttgaaccctactt
cttggtaattttgtaattttgagtagaacttcatgactctggccaataga
accagtgtctaccagatatttttaaagcctacatcagactcagtgggctg
ttttacatggactcctagcattccatacatgggaaaagtgcacaagaaag
gctatttaaatacttacataataaaattatttgaatcccctaagtcatct
tttcttccctcaaatgtaaaatgctaagagtactgtgatattcacactgc
ttaaccagggtgataataaagcaaatgaagtacaggcttggaagaataag
aatctctgctctatcctcagaaacagcattaaaaatggcatttttagtgg
tgcttactgataatcacagcagtggggagaaagaccagtggaaacatggg
gctcaatgaggggctcctttgtgatctcagcctagtgagacctctgcctc
aatacaataaacaaggtagataatgtctgagaaatggcacctgaagttgt
tcctcttatttataggtgtacacaaccaatcccacaagtacatgcataca
agcaaaaatgcactaatgctgttcacatgtctagttgtattctcagagga
caatagcatctgtcgattttagagactaaggaactacttggtgttatgag
aaggaactgaggtcgcaaggatggtttctagattgttgattattcctctg
ctctgattgcttcaggatagagaaatcttctcctattctgatgttactgt
cattttgcaacaatgtcagtgacaagctttctcctggattccacatatct
ggtctgttgctaatagccatgggtgcttagtggtggagtataaatcactg
tgctgtgtcatgacatttcctcactgcagtgatattggttttgctaatac
aacattaatggcatttcatacatccacataagacgtccattggctaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104920871_104922021
seq2: B6Ng01-328D09.g_67_1215 (reverse)

seq1  ATTTAG-CAATGGAATGTCTTATGTGAATTGTATGAAATTGCCA-TAATG  48
      |||||| |||||| | |||||||||| | ||||||||| ||||| |||||
seq2  ATTTAGCCAATGG-ACGTCTTATGTGGA-TGTATGAAA-TGCCATTAATG  47

seq1  TTGTATTAGCAAAAACCAATATCACTGCAGTGA-GAAATGTCAATGACAC  97
      |||||||||| |||||||||||||||||||||| |||||||| |||||||
seq2  TTGTATTAGC-AAAACCAATATCACTGCAGTGAGGAAATGTC-ATGACAC  95

seq1  AGCACAGTGATTTATAACTCCACACCTAAGCACCCATGGCTATTAGCAAC  147
      ||||||||||||||| |||||||  |||||||||||||||||||||||||
seq2  AGCACAGTGATTTAT-ACTCCACCACTAAGCACCCATGGCTATTAGCAAC  144

seq1  AGACCAGATATGTGGAATCCAGGAGAAAGCTTGTCACTGACATTG-TGCA  196
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGACCAGATATGTGGAATCCAGGAGAAAGCTTGTCACTGACATTGTTGCA  194

seq1  AAATGACAGTAACATCAGAATAGGAGAAGATTTCTCTATCCTGAAGCAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGTAACATCAGAATAGGAGAAGATTTCTCTATCCTGAAGCAAT  244

seq1  CAGAGCAGAGGAATAATCAACAATCTAGAAACCATCCTTGCGACCTCAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGAGGAATAATCAACAATCTAGAAACCATCCTTGCGACCTCAGT  294

seq1  TCCTTCTCATAACACCAAGTAGTTCCTTAGTCTCTAAAATCGACAGATGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCATAACACCAAGTAGTTCCTTAGTCTCTAAAATCGACAGATGC  344

seq1  TATTGTCCTCTGAGAATACAACTAGACATGTGAACAGCATTAGTGCATTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCCTCTGAGAATACAACTAGACATGTGAACAGCATTAGTGCATTT  394

seq1  TTGCTTGTATGCATGTACTTGTGGGATTGGTTGTGTACACCTATAAATAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTATGCATGTACTTGTGGGATTGGTTGTGTACACCTATAAATAA  444

seq1  GAGGAACAACTTCAGGTGCCATTTCTCAGACATTATCTACCTTGTTTATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACAACTTCAGGTGCCATTTCTCAGACATTATCTACCTTGTTTATT  494

seq1  GTATTGAGGCAGAGGTCTCACTAGGCTGAGATCACAAAGGAGCCCCTCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAGGCAGAGGTCTCACTAGGCTGAGATCACAAAGGAGCCCCTCAT  544

seq1  TGAGCCCCATGTTTCCACTGGTCTTTCTCCCCACTGCTGTGATTATCAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCCATGTTTCCACTGGTCTTTCTCCCCACTGCTGTGATTATCAGT  594

seq1  AAGCACCACTAAAAATGCCATTTTTAATGCTGTTTCTGAGGATAGAGCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCACTAAAAATGCCATTTTTAATGCTGTTTCTGAGGATAGAGCAG  644

seq1  AGATTCTTATTCTTCCAAGCCTGTACTTCATTTGCTTTATTATCACCCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTATTCTTCCAAGCCTGTACTTCATTTGCTTTATTATCACCCTG  694

seq1  GTTAAGCAGTGTGAATATCACAGTACTCTTAGCATTTTACATTTGAGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCAGTGTGAATATCACAGTACTCTTAGCATTTTACATTTGAGGGA  744

seq1  AGAAAAGATGACTTAGGGGATTCAAATAATTTTATTATGTAAGTATTTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGATGACTTAGGGGATTCAAATAATTTTATTATGTAAGTATTTAA  794

seq1  ATAGCCTTTCTTGTGCACTTTTCCCATGTATGGAATGCTAGGAGTCCATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTTCTTGTGCACTTTTCCCATGTATGGAATGCTAGGAGTCCATG  844

seq1  TAAAACAGCCCACTGAGTCTGATGTAGGCTTTAAAAATATCTGGTAGACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGCCCACTGAGTCTGATGTAGGCTTTAAAAATATCTGGTAGACA  894

seq1  CTGGTTCTATTGGCCAGAGTCATGAAGTTCTACTCAAAATTACAAAATTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCTATTGGCCAGAGTCATGAAGTTCTACTCAAAATTACAAAATTA  944

seq1  CCAAGAAGTAGGGTTCAAAATCAGATTTGCCTAAATCCAGAGCTCATATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGTAGGGTTCAAAATCAGATTTGCCTAAATCCAGAGCTCATATC  994

seq1  CTACATCTGAGCACAAAGGAGAGATCAGTTATGCATTTTAAATTAAAGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTGAGCACAAAGGAGAGATCAGTTATGCATTTTAAATTAAAGTG  1044

seq1  ATGCAAATGAAACTGTAATTCTGCTCCAGACTCAAGGAGCAATTTACCTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATGAAACTGTAATTCTGCTCCAGACTCAAGGAGCAATTTACCTA  1094

seq1  GATCCCTGAGGCAGACACAGGTTTAGAGACAACCAAAGTGGGAGATAATG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGAGGCAGACACAGGTTTAGAGACAACCAAAGTGGGAGATAATG  1144

seq1  AATTC  1151
      |||||
seq2  AATTC  1149


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