BAC Information

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BAC

Clone NameB6Ng01-332F08
Chromosome1 (Build37)
Map Location 49,182,035 - 49,183,174
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik
Downstream geneLOC666924, C230029F24Rik, LOC627430, LOC100041981, EG666962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332F08.bB6Ng01-332F08.g
ACCGA118465GA118466
length1,1281,190
definitionB6Ng01-332F08.b B6Ng01-332F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatattttcaaaactcacttcttactagaattttaaatttttat
ttagtatgatttcattagttacaattcttcactgtaaaatctctaaatgt
atattgacatatttatgatatagcttatttataaacttaattttataatc
ttcagaactttctaatagatatttcttcaaatatgtggctttgtgcttaa
ttgtaatatttaagttttgcttcatgaaatttaatgtaatttccctataa
tgtaatttcccaaagctacttcacaataacttatatagtatagtcaaata
atatcaacaggcattggggacaaacttacattaataaaagaatatgtagt
attaacctgagatatacaaaagacttccctggtcatgatttcatttgccc
aatgaggactttgttcctgattgacttcaatgaaacgtcatcaaaatatc
atctgatatatttaatgttataaagcagagcctcaagtaagtcttgaaat
aatccatcaccattttttctatgaccatatcatggagagtgccttaatat
ttatgcagacattcaaactcatcctgctgctttgaaattttgggatacac
acatgggtgtgtgatgtgatttattttctttgtcatagtaatagagaaag
aaaatgaatcctggttttgagtcttccatataatattgtacagagttttc
tttaacttctgaaaaaaaattacttattatattcaatagtattattacta
ttcatttttttcctgtcatgacgtataactcattcacaatcatttcttta
ttacactatacatactatccagggaaattttgaaaaacaaagcaaaaaat
ttcaccaaacaaccttattctgattttctacacatgtatcttccacacac
caaagtaactacttatttatattttttaacaaaattacatattattcctc
actaatactgcatatttattaactactttgatatttctatgattataggt
ttttctatatattttaaccatactatgatttagagcgctatgtacagatc
ataacatttttcaaaatacaatctagtcactaaattgcagcactacatat
cattttcttaacactaagaaaatataaa

gaattctcacctgtggaatactgaatggccgagaagcagctcaaaaatgt
ttaaaacccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctgaggaggatgtggagaaagaggaacacttctccattgttggtgg
gattgctagcttgtacaagcactctggaaagcagtctggcagttcctcag
aaaattggacatagtactactggaggatcctgtaatacctctcctgggca
tatatccagaagaggtcccaaccggtaagaaggacacatgatccactata
ttcatggcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaatgtggtacatttattcaatga
agtactactcagctattaaaaagaataaatttatgaaattcctaggcaaa
tggatgtacctggagggcatcatcctgagtgaggtaacccaatcaccaag
gaactcacacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaacacatgaaatttaag
aagaacgaagaccaaagtgtggacactttgcctcttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaaatttggagctgcgacga
aaggatggaccatctagtgattgccatatccggggatctatcccataatc
agtttcccaacgctgacaccattgcatacactagcaagattttgctgaat
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattagatggatcacaggccctaat
ggaggagctagaagaaaatatccaaggagctaagagatctgcaatcctgt
aagtgcaacaacattatgaaatacagtaccctgagctctgactctagctg
catatgttatcaaaagatgcctagtggccatcactgaaagagagcccatg
acttgcaacttatatggcccagtaaggaacaccatgcaaagaatgttgct
aggaagcctcctactggagctacgtatatactactgtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49182035_49183174
seq2: B6Ng01-332F08.b_42_1169 (reverse)

seq1  TTTATATTTTCTTTAGTGTTAAGAAAATGAATATGTAGTTGCTTGCAATT  50
      ||||||||||| ||||||||||||||||| |||||||| ||| |||||||
seq2  TTTATATTTTC-TTAGTGTTAAGAAAATG-ATATGTAG-TGC-TGCAATT  46

seq1  TAGTGACTTAAGAATTTGTATTTTGAAAATTGTTATGATCTGTACATAGC  100
      ||||||||  |||  |||||||||||||| ||||||||||||||||||||
seq2  TAGTGACT--AGA--TTGTATTTTGAAAAATGTTATGATCTGTACATAGC  92

seq1  GGCTTCTAAATCATAGTATGGTTAAAATATATAAGAAAAACCTATAATCA  150
      |   |||||||||||||||||||||||||||| |||||||||||||||||
seq2  G--CTCTAAATCATAGTATGGTTAAAATATAT-AGAAAAACCTATAATCA  139

seq1  TAGAAAATATCAAAGTAGTTAATAAATATGCAGTATTAGTGAGGAATAAT  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAG-AAATATCAAAGTAGTTAATAAATATGCAGTATTAGTGAGGAATAAT  188

seq1  ATGTAATTTTGTTAAAAAATATAAATAAGTAGTTACTTTGGTGTGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTTTGTTAAAAAATATAAATAAGTAGTTACTTTGGTGTGTGGAA  238

seq1  GATACATGTGTAGAAAATCAGAATAAGGTTGTTTGGTGAAATTTTTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATGTGTAGAAAATCAGAATAAGGTTGTTTGGTGAAATTTTTTGCT  288

seq1  TTGTTTTTCAAAATTTCCCTGGATAGTATGTATAGTGTAATAAAGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTCAAAATTTCCCTGGATAGTATGTATAGTGTAATAAAGAAATG  338

seq1  ATTGTGAATGAGTTATACGTCATGACAGGAAAAAAATGAATAGTAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAATGAGTTATACGTCATGACAGGAAAAAAATGAATAGTAATAAT  388

seq1  ACTATTGAATATAATAAGTAATTTTTTTTCAGAAGTTAAAGAAAACTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGAATATAATAAGTAATTTTTTTTCAGAAGTTAAAGAAAACTCTG  438

seq1  TACAATATTATATGGAAGACTCAAAACCAGGATTCATTTTCTTTCTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATTATATGGAAGACTCAAAACCAGGATTCATTTTCTTTCTCTAT  488

seq1  TACTATGACAAAGAAAATAAATCACATCACACACCCATGTGTGTATCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGACAAAGAAAATAAATCACATCACACACCCATGTGTGTATCCCA  538

seq1  AAATTTCAAAGCAGCAGGATGAGTTTGAATGTCTGCATAAATATTAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAAAGCAGCAGGATGAGTTTGAATGTCTGCATAAATATTAAGGC  588

seq1  ACTCTCCATGATATGGTCATAGAAAAAATGGTGATGGATTATTTCAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCATGATATGGTCATAGAAAAAATGGTGATGGATTATTTCAAGAC  638

seq1  TTACTTGAGGCTCTGCTTTATAACATTAAATATATCAGATGATATTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGAGGCTCTGCTTTATAACATTAAATATATCAGATGATATTTTGA  688

seq1  TGACGTTTCATTGAAGTCAATCAGGAACAAAGTCCTCATTGGGCAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTTTCATTGAAGTCAATCAGGAACAAAGTCCTCATTGGGCAAATGA  738

seq1  AATCATGACCAGGGAAGTCTTTTGTATATCTCAGGTTAATACTACATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGACCAGGGAAGTCTTTTGTATATCTCAGGTTAATACTACATATT  788

seq1  CTTTTATTAATGTAAGTTTGTCCCCAATGCCTGTTGATATTATTTGACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTAATGTAAGTTTGTCCCCAATGCCTGTTGATATTATTTGACTA  838

seq1  TACTATATAAGTTATTGTGAAGTAGCTTTGGGAAATTACATTATAGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATATAAGTTATTGTGAAGTAGCTTTGGGAAATTACATTATAGGGAA  888

seq1  ATTACATTAAATTTCATGAAGCAAAACTTAAATATTACAATTAAGCACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTAAATTTCATGAAGCAAAACTTAAATATTACAATTAAGCACAA  938

seq1  AGCCACATATTTGAAGAAATATCTATTAGAAAGTTCTGAAGATTATAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATATTTGAAGAAATATCTATTAGAAAGTTCTGAAGATTATAAAA  988

seq1  TTAAGTTTATAAATAAGCTATATCATAAATATGTCAATATACATTTAGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTATAAATAAGCTATATCATAAATATGTCAATATACATTTAGAG  1038

seq1  ATTTTACAGTGAAGAATTGTAACTAATGAAATCATACTAAATAAAAATTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAGTGAAGAATTGTAACTAATGAAATCATACTAAATAAAAATTT  1088

seq1  AAAATTCTAGTAAGAAGTGAGTTTTGAAAATATAGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTAGTAAGAAGTGAGTTTTGAAAATATAGAATTC  1128


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