BAC Information

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BAC

Clone NameB6Ng01-334J14
Chromosome1 (Build37)
Map Location 49,667,815 - 49,668,351
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
Downstream geneEG666962, EG666970, LOC100041993
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334J14.bB6Ng01-334J14.g
ACCGA120065GA120066
length1,1201,209
definitionB6Ng01-334J14.b B6Ng01-334J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggtttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcaa
tcagcaggcatgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctctcctctttcggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccggttgcctggagt
cgacgatggcgccgcctcagaagctctgtggctctcgccaggaaggtggc
cggccgtctggagctgaagatggcgccgcctcagaagctctgtggctctc
atcaggaaggtggctggttgtctggagctgaagatggcgccgtcccagag
gctctgcgactctcgcccgtaccagaaacagctggcctctgtattccaca
cggtctcccgtgcagcctgccctccgcggagtctatttctttttattagg
tattttcctcttttacattttcaatgctatcccaaaggtcccccataccc
accccaccaatcccctacccacccactccccctttttagccctggcgttc
ccctgtactggggcatataaagtttgcaagtccaatgggcctctctttgc
agtgatggccaactaggccatcttttgatacatatgcagctagagacaaa
gagctccggggtactggtagttcatattgttggttcacctaatagggttg
cagttcccattagctcctggggtaatttctctagctccttcatgggggcc
ggtgtgacccatccgatagatgactggtgatcatccactttctgtgtgga
caaggatcatccattagtctagtggcactatctcctcaaaaaatgaaaat
aaacaatttttgaaatagaa

gaattctttgtttagctctgagctccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatacatattggatattggtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtaaattctcgatcttacagcaaagccattgctgttc
tattcaggaattttttccccctgtgcccatatctttgaggcttttcccca
ttttgtcctctataagtttcacagtctctagttttatgtggagttccttg
atccacttagattggaccttagtacaaggagataggaatggatcaatttg
cattctctacatgttaactcccagtcgtgccagcaccatttgttgaaaat
gctgtcttttttccattggatggttttagctcccttgtcaaatatcaatt
gaccataggtgtgtgggttcatttctgtgtcttcaattctattccattgg
tctacttccctgtcactattccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgacaagagtttttgctattctaggttttttattactacagatg
aatttgcagattgccctttctaattcttgaagaattgagttggaattttg
atggggattgcattggatctgtagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgagcatgggagatctttccatcttc
tgggatctttattttctttcttcagaggcttatcatccagatctttcact
tccttaattagagtcatgccaagtattttatattatttgtgactactgtg
aagggcattgcttccctaatttctttctcagcctgtttatcttttgtgta
gaagaaaggcaattgacttctttgagtattttatatccagctactttact
gtttatcagtttagcaggtcttatagttgaattttagggtcactatatat
taactatccataatcatctgcaaaagtgaattgtggctccttctccatca
tcctggactcttttgttgccgaatgggctctggcgtacgacactttcaac
ttaacgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49667815_49668351
seq2: B6Ng01-334J14.b_630_1168

seq1  AGATGGCGCCGTCCCAGAGGCTCTGCGACTCTCGCCCGTACCAGAAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCGCCGTCCCAGAGGCTCTGCGACTCTCGCCCGTACCAGAAACAG  50

seq1  CTGGCCTCTGTATTCCACACGGTCTCCCGTGCAGCCTGCCCTCCGCGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTGTATTCCACACGGTCTCCCGTGCAGCCTGCCCTCCGCGGAG  100

seq1  TCTATTTCTTTTTATTAGGTATTTTCCTCTTTTACATTTTCAATGCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTTTTTATTAGGTATTTTCCTCTTTTACATTTTCAATGCTATC  150

seq1  CCAAAGGTCCCCCATACCCACCCCACCAATCCCCTACCCACCCACTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGTCCCCCATACCCACCCCACCAATCCCCTACCCACCCACTCCCC  200

seq1  CTTTTTAGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGT  250

seq1  CCAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATAC  300

seq1  ATATGCAGCTAGAGAC-AAGAGCTCCGGGGTACTGGTTAGTTCATATTGT  349
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  ATATGCAGCTAGAGACAAAGAGCTCCGGGGTACTGG-TAGTTCATATTGT  349

seq1  TGTTCCACCT-ATAGGGTTGCAGTTCCCATTAGCTCCTTGGGTAATTTCT  398
      || | ||||| ||||||||||||||||||||||||||| |||||||||||
seq2  TGGTTCACCTAATAGGGTTGCAGTTCCCATTAGCTCCTGGGGTAATTTCT  399

seq1  CTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGATGACT-GTGA  447
      ||||||||| ||| |||| | ||||||||||||| |||||||||| ||||
seq2  CTAGCTCCTTCATGGGGGCCGGTGTGACCCATCCGATAGATGACTGGTGA  449

seq1  TCATCCAC-TTCTGTGTGGACCA-GATCATCCATGAGTCTAGTGCACCTT  495
      |||||||| |||||||||||| | |||||||||| |||||||||   || 
seq2  TCATCCACTTTCTGTGTGGACAAGGATCATCCATTAGTCTAGTGGCACTA  499

seq1  TCTCCTCAAAAAATGAAAATAAAATATTTTTGAAAATTAGAA  537
      |||||||||||||||||||||||  ||||||||||  |||||
seq2  TCTCCTCAAAAAATGAAAATAAACAATTTTTGAAA--TAGAA  539


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