BAC Information

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BAC

Clone NameB6Ng01-335F10
Chromosome1 (Build37)
Map Location 97,844,290 - 97,845,305
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335F10.bB6Ng01-335F10.g
ACCGA120600GA120601
length1,0501,017
definitionB6Ng01-335F10.b B6Ng01-335F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataaggaatggctgagaagcacgtgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaactctgggat
tccatctcacatcagtcagaatggctaagatcaaaaactcaggtgagagc
agatgctggcgaggatgtgtagaaagatgaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgacggatactca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatctagaagatgttccacctcggaagaaggacacaagccccactat
gttcacaacagccttatttatatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagttattaaaaatgaatttatgaaattcctaggcaaatgg
atggacgtggtgggcatcatcctgagtgagataacccaatcacaaaagaa
ctcatatgaaatgtactcactgataagtggatagtagcccagaaacttag
aatacccaagatataagatacaatttgcaaaacacatgaaactcaagaag
aatgaagaccaaagtgtggacactttaccccttcttagaattgggaacaa
atcatccatggaaggagttacagaaacaaagtttggagctgagacgaaag
gatggatcatctagagaccgccatacccggggatccatcccataatcagc
ctccaaacgctgacaccattgtacacactagcaagattttgctgaaagga
ccctgatatagctgtgttttgtgaggctatgccggggtctagcaaacaca
gatgtggatgctcacagtcagctattggatggatcacggggcccccatgg
cagagctagagaaaggtacgccagaagctaaggggtctgcaacctatagg
gtgataactacataatgaaactacccagtaccctccccgggaagcttcac

gaattccattgtatctttggtattttttatatgttaccaatcaacaaatg
cagttattcagttaatacagatacaaaagtttaatttgagctgatagaaa
taaaactttacttgttcttagtgtgtttttattatatttatgtacttaat
tgtgttatgaagttgtgggaatacagaaatggtacagtgtggataagtca
gaggacaaatgtaggggagttgggtttttccccctccatgatgttggtac
caggactgaatgcaagcagtatggtttggcagaagataacgttaaccact
gagccagtttgggggctctctttttactatttatgaggtgatttttgcct
tttggtctactctataatggcagacatcccaggcataccatggaaatcca
agacagaaaaataaaatagttaatattattggccaaatatgacctgactg
actattttgagcattattattctaaacactttggtaatagctgaagggca
atatgaaatgtgatgcaaaacattaatgtaatatgccacttttagcatta
tgacacagctttataaaagacaacccatagataaagacctctcacataat
ctaggcagacagtcctcctcagcaggtgatcactcaaacattcaaagtca
agcaatacctaggaaattaaacttcaaactctgagatatgtgtttgctca
aagtacagatagcattgtgaagctttactgaattgtgtattacccctgtt
taaagagagtctctataaacttctgtggctacattgaagatttttttaat
ttatttttttaattagatattttctttatttacattttaaatgttatcct
ctttcctagtttcctccctgaaaatcctctaccccctaccctcttcccct
gctccccaaccaacccagtcctgcttcctggccttggcattcccctattt
ctggggcatagaaccttcacaagaccagggcctctcttctaattggccgg
ctgactagggccatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97844290_97845305
seq2: B6Ng01-335F10.g_71_1087 (reverse)

seq1  AAGATGG-CCTAGTCAGCC-GCCAATTAGAGGAGAGGCCCTTGGTCTTGT  48
      ||||||| ||||||||||| |||||||||| ||||||||| |||||||||
seq2  AAGATGGCCCTAGTCAGCCGGCCAATTAGAAGAGAGGCCC-TGGTCTTGT  49

seq1  GAAGGTTCTATGCCCCAG-AATAGGGGAATGCCAGGGCCAGGAAGCAGGG  97
      |||||||||||||||||| ||||||||||||||| |||||||||||||| 
seq2  GAAGGTTCTATGCCCCAGAAATAGGGGAATGCCAAGGCCAGGAAGCAGGA  99

seq1  CTGGGTGGGTTGGGGAGCAGGGGGAGAGGGTAGGGGGTAGAGGATTTTCA  147
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGGGTTGGTTGGGGAGCAGGGGAAGAGGGTAGGGGGTAGAGGATTTTCA  149

seq1  GGGAGGAAACTAGGAAAGAGGATAACATTTAAAATGTAAATAAAGAAAAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAACTAGGAAAGAGGATAACATTTAAAATGTAAATAAAGAAAAT  199

seq1  ATCTAATTAAAAAAATAAATTAAAAAAAATCTTCAATGTAGCCACAGAAG  247
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCTAATTAAAAAAATAAATT-AAAAAAATCTTCAATGTAGCCACAGAAG  248

seq1  TTTATAGAGACTCTCTTTAAACAGGGGTAATACACAATTCAGTAAAGCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAGACTCTCTTTAAACAGGGGTAATACACAATTCAGTAAAGCTT  298

seq1  CACAATGCTATCTGTACTTTGAGCAAACACATATCTCAGAGTTTGAAGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGCTATCTGTACTTTGAGCAAACACATATCTCAGAGTTTGAAGTT  348

seq1  TAATTTCCTAGGTATTGCTTGACTTTGAATGTTTGAGTGATCACCTGCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCTAGGTATTGCTTGACTTTGAATGTTTGAGTGATCACCTGCTG  398

seq1  AGGAGGACTGTCTGCCTAGATTATGTGAGAGGTCTTTATCTATGGGTTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGACTGTCTGCCTAGATTATGTGAGAGGTCTTTATCTATGGGTTGT  448

seq1  CTTTTATAAAGCTGTGTCATAATGCTAAAAGTGGCATATTACATTAATGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATAAAGCTGTGTCATAATGCTAAAAGTGGCATATTACATTAATGT  498

seq1  TTTGCATCACATTTCATATTGCCCTTCAGCTATTACCAAAGTGTTTAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCACATTTCATATTGCCCTTCAGCTATTACCAAAGTGTTTAGAA  548

seq1  TAATAATGCTCAAAATAGTCAGTCAGGTCATATTTGGCCAATAATATTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGCTCAAAATAGTCAGTCAGGTCATATTTGGCCAATAATATTAA  598

seq1  CTATTTTATTTTTCTGTCTTGGATTTCCATGGTATGCCTGGGATGTCTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTATTTTTCTGTCTTGGATTTCCATGGTATGCCTGGGATGTCTGC  648

seq1  CATTATAGAGTAGACCAAAAGGCAAAAATCACCTCATAAATAGTAAAAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGAGTAGACCAAAAGGCAAAAATCACCTCATAAATAGTAAAAAG  698

seq1  AGAGCCCCCAAACTGGCTCAGTGGTTAACGTTATCTTCTGCCAAACCATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCCCAAACTGGCTCAGTGGTTAACGTTATCTTCTGCCAAACCATA  748

seq1  CTGCTTGCATTCAGTCCTGGTACCAACATCATGGAGGGGGAAAAACCCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCATTCAGTCCTGGTACCAACATCATGGAGGGGGAAAAACCCAA  798

seq1  CTCCCCTACATTTGTCCTCTGACTTATCCACACTGTACCATTTCTGTATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACATTTGTCCTCTGACTTATCCACACTGTACCATTTCTGTATT  848

seq1  CCCACAACTTCATAACACAATTAAGTACATAAATATAATAAAAACACACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACTTCATAACACAATTAAGTACATAAATATAATAAAAACACACT  898

seq1  AAGAACAAGTAAAGTTTTATTTCTATCAGCTCAAATTAAACTTTTGTATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGTAAAGTTTTATTTCTATCAGCTCAAATTAAACTTTTGTATC  948

seq1  TGTATTAACTGAATAACTGCATTTGTTGATTGGTAACATATAAAAAATAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAACTGAATAACTGCATTTGTTGATTGGTAACATATAAAAAATAC  998

seq1  CAAAGATACAATGGAATTC  1016
      |||||||||||||||||||
seq2  CAAAGATACAATGGAATTC  1017