BAC Information

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BAC

Clone NameB6Ng01-335M02
Chromosome1 (Build37)
Map Location 91,120,803 - 91,121,944
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040766, 6430706D22Rik, LOC100038822, Trpm8, Spp2, Glrp1, Arl4c, LOC100040127, 2410088K16Rik, LOC208347, Sh3bp4
Downstream geneLOC383542, EG665688, Centg2, Gbx2, Asb18, Iqca, Cxcr7
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335M02.bB6Ng01-335M02.g
ACCGA120881GA120882
length1,1241,114
definitionB6Ng01-335M02.b B6Ng01-335M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttgcagatattttattgagaattcttgtatctatgttcata
agggaaattggtttgaaactcactctctttgttggctctttatgtggttt
aggtatcagcgtaattgtgacatcataaaacaaagtggatggtgtttatt
ctgtttctatttggtggagtaatttgtaagtctaatagaattctgtacta
aaaccatctggccctgttttgtttgtttgtttgtttgtttataagacttt
tattaccaccaatttcactaaaggttataggtctgtttcaattgcttctc
tgatcttgatttaactttggtaagtgtatgtattgactgaattatccact
tcttttacactttccagtttggtggagtaaaagcttcctaggtatgtcct
tatggctctctagatttcttcagtgtctcttgttattcccgcttcatttc
tgattcagttactttggatactctctttgccttttagttcatttgaatga
gggtttgccaatttcattcattttctcaaagaactaactctttgtttcat
tgattctttggacagggttgttttgttttgtttctattttattgatttca
accctgcaattgattactttttgttttctactccttctaggtgagtgttt
ttcttttcattctaaagctttcaggtctgctgttaagcttctagtatgag
atctttgcattttttctttaaaatacaggcacttagtgctatgaacttac
ctcttagaaccatctttattgtgtcccataagttgtggcatgttgtgtat
tcactgtcattcaattttaggaagtctttaaattctttcttttgtcctga
cccatttttcattcagtagtgcattgttcggtttccatgagtttgtaagc
tttctgttgtctttgttgttgatatccatctttaatctgtgtggtcagat
gggattcaagggagttattcctttttttcttgtactactgaactgattta
tgtccagcctatgtggcatttgagaaagtcacagagaagattgtatattt
gtgtgacggctcgtgggaaattccgtaatctgataggtccacttggatat
ggcagttagacctaccagcgttag

gaattcactctgtagaccaggctggcctcgaactcagagatctgcctgcc
tctgcctcccaagtgctgggattaaaggcatgtcccatcatacccagctt
acagatagtttcatgataattacactgccacagtggggtgagagttcact
gtaatgcctagagtttagatttcaccattcttaaaaataatttaaaaaaa
taaaaacttggctgctcctctctctgccttctaaattagaacaacttgtt
ccaatttatgcttaaaatctcaaagaatttcggtatgtaactcatgggtg
ctggttattagggaaatttatcacataggatcaggatgcacttactcatt
ggtggtaaactagcttactgcttttatttaggcggtgtacagctctttaa
aaatgatttgaagctgttttaaaacttaaaatagaacgaataaaattgaa
acataaaataagaccgaatttaaaagccaggtattgtaacacgtgtctac
aatccagcacttaagaagccgaggtaggaggattgtgagtctgaggttgg
cctggctatataatgagtctcagttgcccctggacatcctgatgctcagg
tcaaatcccaaggacactattttccttgcaatcaaagttctgttgccttt
ttggttggtttgcttgtgtctgtgtatttgtccggctgcattccaacctc
cacacttatttgtttgtttgtttgtttgtaactattgtcttatcttctat
tctgtttaactatttcttctctggagatctataactaaagagtgacaaaa
agaaaaacaaaaatcaaatgttaatcccaccaattgagaataagatgact
accacgattcaagccaaatttgaagcaagctttaattaaacactggccag
gttgatggacctcatcagtccatatctggattcccagggagtgccatgag
tcgttttttgcagtgcttaaagctaaaccacatttaccatttttcccata
catcctaatatatttctgcctcatacctcatatgatcagcacttcggtgt
cacagaaaaacacttggttgggagtgaaacatacatagccttgctgtaac
cttgttttgcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_91120803_91121944
seq2: B6Ng01-335M02.g_67_1180

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAGATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAGATCTGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTCCCATCATACCCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTCCCATCATACCCAGCTT  100

seq1  ACAGATAGTTTCATGATAATTACACTGCCACAGTGGGGTGAGAGTTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAGTTTCATGATAATTACACTGCCACAGTGGGGTGAGAGTTCACT  150

seq1  GTAATGCCTAGAGTTTAGATTTCACCATTCTTAAAAATAATTTAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCCTAGAGTTTAGATTTCACCATTCTTAAAAATAATTTAAAAAAA  200

seq1  TAAAAACTTGGCTGCTCCTCTCTCTGCCTTCTAAATTAGAACAACTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTTGGCTGCTCCTCTCTCTGCCTTCTAAATTAGAACAACTTGTT  250

seq1  CCAATTTATGCTTAAAATCTCAAAGAATTTCGGTATGTAACTCATGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTATGCTTAAAATCTCAAAGAATTTCGGTATGTAACTCATGGGTG  300

seq1  CTGGTTATTAGGGAAATTTATCACATAGGATCAGGATGCACTTACTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTATTAGGGAAATTTATCACATAGGATCAGGATGCACTTACTCATT  350

seq1  GGTGGTAAACTAGCTTACTGCTTTTATTTAGGCGGTGTACAGCTCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAAACTAGCTTACTGCTTTTATTTAGGCGGTGTACAGCTCTTTAA  400

seq1  AAATGATTTGAAGCTGTTTTAAAACTTAAAATAGAACGAATAAAATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTTGAAGCTGTTTTAAAACTTAAAATAGAACGAATAAAATTGAA  450

seq1  ACATAAAATAAGACCGAATTTAAAAGCCAGGTATTGTAACACGTGTCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATAAGACCGAATTTAAAAGCCAGGTATTGTAACACGTGTCTAC  500

seq1  AATCCAGCACTTAAGAAGCCGAGGTAGGAGGATTGTGAGTCTGAGGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCACTTAAGAAGCCGAGGTAGGAGGATTGTGAGTCTGAGGTTGG  550

seq1  CCTGGCTATATAATGAGTCTCAGTTGCCCCTGGACATCCTGATGCTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTATATAATGAGTCTCAGTTGCCCCTGGACATCCTGATGCTCAGG  600

seq1  TCAAATCCCAAGGACACTATTTTCCTTGCAATCAAAGTTCTGTTGCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCAAGGACACTATTTTCCTTGCAATCAAAGTTCTGTTGCCTTT  650

seq1  TTGGTTGGTTTGCTTGTGTCTGTGTATTTGTCCGGCTGCATTCCAACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGTTTGCTTGTGTCTGTGTATTTGTCCGGCTGCATTCCAACCTC  700

seq1  CACACTTATTTGTTTGTTTGTTTGTTTGTAACTATTGTCTTATCTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTATTTGTTTGTTTGTTTGTTTGTAACTATTGTCTTATCTTCTAT  750

seq1  TCTGTTTAACTATTTCTTCTCTGGAGATCTATAACTAAAGAGTGACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTAACTATTTCTTCTCTGGAGATCTATAACTAAAGAGTGACAAAA  800

seq1  AGAAAAACAAAAATCAAATGTTAATCCCACCAATTGAGAATAAGATGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAAAATCAAATGTTAATCCCACCAATTGAGAATAAGATGACT  850

seq1  ACCACGATTCAAAGCCAAATTTGAAGCAAGCTTTAATTAAACACTGGCCA  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCACGATTC-AAGCCAAATTTGAAGCAAGCTTTAATTAAACACTGGCCA  899

seq1  GGTTGATGGACCTCATCAGGTCCATATCTGGATTCCCAGGGAGTGGCCAT  950
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  GGTTGATGGACCTCATCA-GTCCATATCTGGATTCCCAGGGAGT-GCCAT  947

seq1  GAGTCGTTTTTTGCAGGTGCTTAAAAGGCTAAACCCACAATTTACCATTT  1000
      ||||||||||||||| |||||||||  |||||| |||| |||||||||||
seq2  GAGTCGTTTTTTGCA-GTGCTTAAA--GCTAAA-CCAC-ATTTACCATTT  992

seq1  TTCCCATACATCCT-ATATATTTCCTGCCCTCATACCTCATATGATCAAG  1049
      |||||||||||||| |||||||| ||| ||||||||||||||||||| ||
seq2  TTCCCATACATCCTAATATATTT-CTG-CCTCATACCTCATATGATC-AG  1039

seq1  CACTTCCGGTGTCAACAGGAAAAAAACAAACTTGTTTTGGGGAGTGAAAA  1099
      ||||| ||||||| ||||   ||||||  ||||| ||  ||||||| |||
seq2  CACTT-CGGTGTC-ACAG---AAAAAC--ACTTGGTT--GGGAGTG-AAA  1079

seq1  CATAAACAATAGCCTCTGCTGTTAAACTTTGTTTTTTGCAAAA  1142
      ||||    ||||||| ||||||  ||| |||  ||||||||||
seq2  CATA---CATAGCCT-TGCTGT--AACCTTG--TTTTGCAAAA  1114


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