BAC Information

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BAC

Clone NameB6Ng01-337N08
Chromosome1 (Build37)
Map Location 71,799,691 - 71,942,681
singlet/doubletdoublet
Overlap geneLOC675667, EG667931
Upstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528
Downstream geneEG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337N08.bB6Ng01-337N08.g
ACCGA122331GA122332
length9541,092
definitionB6Ng01-337N08.b B6Ng01-337N08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,941,733 - 71,942,681)(71,799,691 - 71,800,569)
sequence
gaattcctgttggcatgcatatgcatccctataaggagaaaggtaccagg
cagtgtcttcccagaaacagccatgagatgcagttagattgcatctaccc
atttacagagttccaagaggaagggatgaagggaaggtcaactctgaggg
atgtttgaggttcctttatttacactcacgttatgacttgccgtttaaga
acaatggaggagaatatgagtcatatttagtaggagaaaaacaggagaat
acattgaggagctgatttctacaaattcttggtgaaccatgttttattgg
tggggagatatgtgaatagataccttaaataattcagcatctttaagcat
gaaaatggagaattaaaaacgccaacatctttttgctaaattggttctgc
ttttattcaaaattttaaaaagtcagaaagggccatctttaccttttggc
ctggtgaattgtgtgtaaactgacctgcagagacagggagggcaactgct
ctgtggtaccggcttacaaactgagagatcaacgtcagcttctccgtgtg
tgaggacagagttttatagtttataaatgttaagttcacctctgtggagc
aaacataaccttcagctattatttataaaactgttaatgggataaagcaa
tctgacagtgcctgtggttgtctgctggtctaacgaccttaagacctcag
ggttttcactgttttactaggtacggtgaatctgcaaagaagggagagaa
ggcacgtgaaaaatccgatttctcctgtgattctctggtttggtgggaaa
gaagattcaagagctcagctaaggtccagcttgggatgaggtcattttga
cggctttcctttcgcctttgatgctaacctggtggcgggttgactgaaca
gtattggtctaccgaacagagttcttgctgcaattgttaagtgtggtgcg
agga
gaattccttgctactgacatacatgtattggtctgccttacactgcatag
ttgagctgcatttgttgggactctatagagagaaacacatggaaaaactt
ctggtaatgtgcttgctgagtcctcacagtccttgggctgattgttgatt
ggcagaataatgtcagctgagacaaattcacgtgctgagacaagacacat
gctgaggtaagacctgtggaggacacatgatgttttggagcgagtttaga
aaggacttgacagacagtgacagaggctcagctaaccttgctgtgcaacg
gttgttggtctcatgtctttgctgatcttcatttctgagagaggcacagc
tgagaacttctggcgttccttctggtcccttctgctgactcctgctgagg
ctgaggcttggctgtctctgctaggcagtgtcactgctgctgatttgtgt
ttgttatcccgagtctacccaactggactgctgatatatccttgaaatgt
ttgtgagtggatcaagctgctgctgttgtcctgagatttgaactaccaat
ttccagacaacccagatgggagttgctccaaagaacctttctaaacaggt
tcacttccctcatatcctttcttttctactacctgtggtgagtagtgggc
taaaaggaaggttaaagcatttaagaactaccattaaaagtagactttga
aaaaattaaagttacacatgaccattatcttttgtgcccagtcacaccat
ctttgataccttcctgcctgtagtttcatccatttcaaattactctttct
acaatgaggggaagcatgttggaattctactcacacatagattaggaagc
ttatagtccttgggacaggtagcagcctgaactaaaagataatctataag
agagctgcattatgactttcataggaggttattaggacatgacttttctc
ctatcaactttgtgtgttgaagtcctcaatgcccagcacttaaagtatga
taaaattgagataggatctttaaagatatattatggctaaattaggattt
attggacatgtggtggcagacagagaggcgtgtaagatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71941733_71942681
seq2: B6Ng01-337N08.b_49_1002 (reverse)

seq1  TCCTCACACCACACTTAACAA-TGCAGCAAGAACTCTG-TCCGTAGACCA  48
      ||||| ||||||||||||||| |||||||||||||||| || ||||||||
seq2  TCCTCGCACCACACTTAACAATTGCAGCAAGAACTCTGTTCGGTAGACCA  50

seq1  ATACTG-TCAGTCAACCCGCCACCAGGTTAGCATC-AAGGCG-AAGGAAA  95
      |||||| |||||||||||||||||||||||||||| |||||| |||||||
seq2  ATACTGTTCAGTCAACCCGCCACCAGGTTAGCATCAAAGGCGAAAGGAAA  100

seq1  GCCGTCAAAATGACCTCATCCCAAGCTGGACCTTAGCTGAGCTCTTGAAT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCAAAATGACCTCATCCCAAGCTGGACCTTAGCTGAGCTCTTGAAT  150

seq1  CTTCTTTCCCACCAAACCAGAGAACCACAGGAGAAATCGGATTTTTCACG  195
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTCTTTCCCACCAAACCAGAGAATCACAGGAGAAATCGGATTTTTCACG  200

seq1  TGCCTTCTCTCCCTTCTTTGCAGATTCACCGTACCTAGTAAAACAGTGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTCTCCCTTCTTTGCAGATTCACCGTACCTAGTAAAACAGTGAA  250

seq1  AACCCTGAGGTCTTAAGGTCGTTAGACCAGCAGACAACCACAGGCACTGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAGGTCTTAAGGTCGTTAGACCAGCAGACAACCACAGGCACTGT  300

seq1  CAGATTGCTTTATCCCATTAACAGTTTTATAAATAATAGCTGAAGGTTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGCTTTATCCCATTAACAGTTTTATAAATAATAGCTGAAGGTTAT  350

seq1  GTTTGCTCCACAGAGGTGAACTTAACATTTATAAACTATAAAACTCTGTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTCCACAGAGGTGAACTTAACATTTATAAACTATAAAACTCTGTC  400

seq1  CTCACACACGGAGAAGCTGACGTTGATCTCTCAGTTTGTAAGCCGGTACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACACGGAGAAGCTGACGTTGATCTCTCAGTTTGTAAGCCGGTACC  450

seq1  ACAGAGCAGTTGCCCTCCCTGTCTCTGCAGGTCAGTTTACACACAATTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGTTGCCCTCCCTGTCTCTGCAGGTCAGTTTACACACAATTCA  500

seq1  CCAGGCCAAAAGGTAAAGATGGCCCTTTCTGACTTTTTAAAATTTTGAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCAAAAGGTAAAGATGGCCCTTTCTGACTTTTTAAAATTTTGAAT  550

seq1  AAAAGCAGAACCAATTTAGCAAAAAGATGTTGGCGTTTTTAATTCTCCAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGAACCAATTTAGCAAAAAGATGTTGGCGTTTTTAATTCTCCAT  600

seq1  TTTCATGCTTAAAGATGCTGAATTATTTAAGGTATCTATTCACATATCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTTAAAGATGCTGAATTATTTAAGGTATCTATTCACATATCTC  650

seq1  CCCACCAATAAAACATGGTTCACCAAGAATTTGTAGAAATCAGCTCCTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAATAAAACATGGTTCACCAAGAATTTGTAGAAATCAGCTCCTCA  700

seq1  ATGTATTCTCCTGTTTTTCTCCTACTAAATATGACTCATATTCTCCTCCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCTCCTGTTTTTCTCCTACTAAATATGACTCATATTCTCCTCCA  750

seq1  TTGTTCTTAAACGGCAAGTCATAACGTGAGTGTAAATAAAGGAACCTCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAAACGGCAAGTCATAACGTGAGTGTAAATAAAGGAACCTCAA  800

seq1  ACATCCCTCAGAGTTGACCTTCCCTTCATCCCTTCCTCTTGGAACTCTGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTCAGAGTTGACCTTCCCTTCATCCCTTCCTCTTGGAACTCTGT  850

seq1  AAATGGGTAGATGCAATCTAACTGCATCTCATGGCTGTTTCTGGGAAGAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTAGATGCAATCTAACTGCATCTCATGGCTGTTTCTGGGAAGAC  900

seq1  ACTGCCTGGTACCTTTCTCCTTATAGGGATGCATATGCATGCCAACAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTGGTACCTTTCTCCTTATAGGGATGCATATGCATGCCAACAGGA  950

seq1  ATTC  949
      ||||
seq2  ATTC  954

seq1: chr1_71799691_71800569
seq2: B6Ng01-337N08.g_286_1159

seq1  GAGGACACATGATGTTTTGGAGCGAGTTTAGAAAGGACTTGACAGACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACATGATGTTTTGGAGCGAGTTTAGAAAGGACTTGACAGACAGT  50

seq1  GACAGAGGCTCAGCTAACCTTGCTGTGCAACGGTTGTTGGTCTCATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGCTCAGCTAACCTTGCTGTGCAACGGTTGTTGGTCTCATGTCT  100

seq1  TTGCTGATCTTCATTTCTGAGAGAGGCACAGCTGAGAACTTCTGGCGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATCTTCATTTCTGAGAGAGGCACAGCTGAGAACTTCTGGCGTTC  150

seq1  CTTCTGGTCCCTTCTGCTGACTCCTGCTGAGGCTGAGGCTTGGCTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTCCCTTCTGCTGACTCCTGCTGAGGCTGAGGCTTGGCTGTCTC  200

seq1  TGCTAGGCAGTGTCACTGCTGCTGATTTGTGTTTGTTATCCCGAGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCAGTGTCACTGCTGCTGATTTGTGTTTGTTATCCCGAGTCTAC  250

seq1  CCAACTGGACTGCTGATATATCCTTGAAATGTTTGTGAGTGGATCAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGGACTGCTGATATATCCTTGAAATGTTTGTGAGTGGATCAAGCT  300

seq1  GCTGCTGTTGTCCTGAGATTTGAACTACCAATTTCCAGACAACCCAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTTGTCCTGAGATTTGAACTACCAATTTCCAGACAACCCAGATG  350

seq1  GGAGTTGCTCCAAAGAACCTTTCTAAACAGGTTCACTTCCCTCATATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGCTCCAAAGAACCTTTCTAAACAGGTTCACTTCCCTCATATCCT  400

seq1  TTCTTTTCTACTACCTGTGGTGAGTAGTGGGCTAAAAGGAAGGTTAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTACTACCTGTGGTGAGTAGTGGGCTAAAAGGAAGGTTAAAGC  450

seq1  ATTTAAGAACTACCATTAAAAGTAGACTTTGAAAAAATTAAAGTTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAACTACCATTAAAAGTAGACTTTGAAAAAATTAAAGTTACACA  500

seq1  TGACCATTATCTTTTGTGCCCAGTCACACCATCTTTGATACCTTCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTATCTTTTGTGCCCAGTCACACCATCTTTGATACCTTCCTGCC  550

seq1  TGTAGTTTCATCCATTTCAAATTACTCTTTCTACAATGA-GGGAAGCATG  599
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTAGTTTCATCCATTTCAAATTACTCTTTCTACAATGAGGGGAAGCATG  600

seq1  TTGGAATTCTACTCACACATAGATTAGGAAGCTTATAGTCCTTGGGACAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCTACTCACACATAGATTAGGAAGCTTATAGTCCTTGGGACAG  650

seq1  GTAGCAGCCTGAACTAAAAGATAATCTATAAGAGAGCTGCATTATGACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCCTGAACTAAAAGATAATCTATAAGAGAGCTGCATTATGACTT  700

seq1  TCATAGGAGGTTATTAGGACATGAC-TTTCTCCTTATCAACTTTGTGTGT  748
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  TCATAGGAGGTTATTAGGACATGACTTTTCTCC-TATCAACTTTGTGTGT  749

seq1  TGAAGT-CTCAATGCCCAGCACTTAAAAGTATGATAAAATTGAGATAGGA  797
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAAGTCCTCAATGCCCAGCACTT-AAAGTATGATAAAATTGAGATAGGA  798

seq1  TCTTTAAAGATATAATTATGGTTAAATTAAGATTTATTTGACAAATGTGT  847
      ||||||||||||| ||||||| ||||||| |||||||| |||  ||||| 
seq2  TCTTTAAAGATAT-ATTATGGCTAAATTAGGATTTATTGGAC--ATGTGG  845

seq1  GGGCAGAGAGGAGAGGCCGTGTAAGGGTATTG  879
       |||||| | |||||| ||||||| | |||||
seq2  TGGCAGACA-GAGAGG-CGTGTAA-GATATTG  874