MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-340A12
Chromosome	1 (Build37)
Map Location	54,580,841 - 54,581,965
singlet/doublet	singlet
Overlap gene	D230012E17Rik
Upstream gene	LOC100042162, Dnahc7, Stk17b, Hecw2, 4930511H11Rik, Gtf3c3, EG627915
Downstream gene	Ankrd44, Sf3b1, Coq10b, Hspd1, Hspe1, LOC381258, Prei3, EG627998, Rftn2, Mars2, LOC666793, Boll, EG632964, LOC667237, LOC626009
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042162 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 14 Proteins

name	Dnahc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627872 MGI:2685838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Stk17b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98267 MGI:2138162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hecw2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329152 MGI:2685817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930511H11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78016 MGI:1925266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf3c3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98488 MGI:2138383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627915 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627915 MGI:3645540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	D230012E17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241062 MGI:2443342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins

name	Ankrd44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329154 MGI:3045243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sf3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81898 MGI:1932339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coq10b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67876 MGI:1915126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hspd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15510 MGI:96242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15528 MGI:104680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC381258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins pseudo : _no_value

name	Prei3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19070 MGI:104899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627998 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627998 MGI:3644721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 286 ESTs, 5 Proteins

name	Rftn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74013 MGI:1921263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212679 MGI:2444136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 474 ESTs, 3 Proteins pseudo : _no_value

name	Boll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75388 MGI:1922638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG632964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632964 MGI:3645964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	LOC667237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins pseudo : _no_value

name	LOC626009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626009
definition	note : aldo-keto reductase family 1, member B3-like pseudo : _no_value

name	LOC100042162 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233838 GeneID:100042162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 14 Proteins product : similar to KIAA0944 protein transcript_id : XM_001477662.1

name	Dnahc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363388 GeneID:627872 MGI:2685838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : dynein, axonemal, heavy chain 7 transcript_id : XM_355197.5

name	Stk17b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559987 GeneID:98267 MGI:2138162
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 17b (apoptosis-inducing) transcript_id : NM_133810.2

name	Hecw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131081 GeneID:329152 MGI:2685817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 transcript_id : NM_001001883.2

name	Hecw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369943 GeneID:329152 MGI:2685817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 transcript_id : NM_172655.1

name	4930511H11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037516 GeneID:78016 MGI:1925266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930511H11 gene transcript_id : NM_030025.1

name	Gtf3c3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802741 GeneID:98488 MGI:2138383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIIC, polypeptide 3 transcript_id : NM_001033194.2

name	EG627915 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233841 GeneID:627915 MGI:3645540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG627915 transcript_id : XM_892615.3

name	D230012E17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233879 GeneID:241062 MGI:2443342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins product : RIKEN cDNA D230012E17 gene transcript_id : XM_892623.2

name	Ankrd44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487460 GeneID:329154 MGI:3045243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 44 transcript_id : NM_001081433.1

name	Sf3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14042920 GeneID:81898 MGI:1932339
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor 3b, subunit 1 transcript_id : NM_031179.1

name	Coq10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337273 GeneID:67876 MGI:1915126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q10 homolog B (S. cerevisiae) transcript_id : NM_001039710.1

name	Coq10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337265 GeneID:67876 MGI:1915126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q10 homolog B (S. cerevisiae) transcript_id : NM_026424.3

name	Hspd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366334 GeneID:15510 MGI:96242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 1 (chaperonin) transcript_id : NM_010477.3

name	Hspe1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892401 GeneID:15528 MGI:104680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 1 (chaperonin 10) transcript_id : NM_008303.3

name	Prei3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347251 GeneID:19070 MGI:104899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : preimplantation protein 3 transcript_id : NM_025283.3

name	EG627998 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233882 GeneID:627998 MGI:3644721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 286 ESTs, 5 Proteins product : predicted gene, EG627998 transcript_id : XM_892716.3

name	Rftn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625980 GeneID:74013 MGI:1921263
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : raftlin family member 2 transcript_id : NM_028713.1

name	Mars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461994 GeneID:212679 MGI:2444136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methionine-tRNA synthetase 2 (mitochondrial) transcript_id : NM_175439.3

name	Boll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375380 GeneID:75388 MGI:1922638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bol, boule-like (Drosophila) transcript_id : NM_029267.2

name	EG632964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233845 GeneID:632964 MGI:3645964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG632964 transcript_id : XM_989174.2

name	LOC100042162 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233839 GeneID:100042162
definition	codon_start : 1 product : similar to KIAA0944 protein protein_id : XP_001477712.1

name	Dnahc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82879258 GeneID:627872 MGI:2685838
definition	codon_start : 1 product : similar to dynein, axonemal, heavy polypeptide 7 protein_id : XP_355197.4

name	Stk17b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559988 CCDS:CCDS14955.1 GeneID:98267 MGI:2138162
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS]; GO:0007243 - protein kinase cascade [Evidence ISS] codon_start : 1 product : serine/threonine kinase 17b (apoptosis-inducing) protein_id : NP_598571.2

name	Hecw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457861 CCDS:CCDS14956.1 GeneID:329152 MGI:2685817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; NEDD4-related E3 ubiquitin ligase NEDL2; HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2, isoform 2 product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 isoform 1 protein_id : NP_001001883.1

name	Hecw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369944 CCDS:CCDS14957.1 GeneID:329152 MGI:2685817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; NEDD4-related E3 ubiquitin ligase NEDL2; HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2, isoform 2 product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 isoform 2 protein_id : NP_766243.1

name	4930511H11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037517 GeneID:78016 MGI:1925266
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC78016 protein_id : NP_084301.1

name	Gtf3c3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677510 CCDS:CCDS14958.1 GeneID:98488 MGI:2138383
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : transcription factor IIIC-gamma subunit; TFIIIC 102 kDa subunit product : general transcription factor 3C polypeptide 3 protein_id : NP_001028366.1

name	EG627915 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233842 GeneID:627915 MGI:3645540
definition	codon_start : 1 product : similar to IIDS6411 protein_id : XP_897708.3

name	D230012E17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233880 GeneID:241062 MGI:2443342
definition	codon_start : 1 product : GPI deacylase protein_id : XP_897716.2

name	Ankrd44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487461 GeneID:329154 MGI:3045243
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : ankyrin repeat domain 44 protein_id : NP_001074902.1

name	Sf3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14042921 GeneID:81898 MGI:1932339
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] [Evidence ISS] codon_start : 1 exception : mismatches in translation note : transforming growth factor alpha regulated gene 4; splicing factor 3b, subunit 1, 155 kDa product : splicing factor 3b, subunit 1 protein_id : NP_112456.1

name	Coq10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89337274 GeneID:67876 MGI:1915126
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : coenzyme Q10 homolog B isoform 1 protein_id : NP_001034799.1

name	Coq10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89337266 CCDS:CCDS14959.1 GeneID:67876 MGI:1915126
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : coenzyme Q10 homolog B isoform 2 protein_id : NP_080700.3

name	Hspd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981679 GeneID:15510 MGI:96242
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 exception : mismatches in translation note : heat shock protein, 60 kDa; heat shock 60kDa protein 1 (chaperonin) product : heat shock protein 1 (chaperonin) protein_id : NP_034607.2

name	Hspe1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680309 GeneID:15528 MGI:104680
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0051087 - chaperone binding [Evidence ISS]; GO:0051082 - unfolded protein binding [Evidence ISS] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock 10 kDa protein 1 (chaperonin 10); mitochondrial chaperonin 10 product : heat shock protein 1 (chaperonin 10) protein_id : NP_032329.1

name	Prei3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254521 CCDS:CCDS14960.1 GeneID:19070 MGI:104899
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : preimplantation protein 3 protein_id : NP_079559.2

name	EG627998 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82879266 GeneID:627998 MGI:3644721
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897809.1

name	Rftn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625981 CCDS:CCDS14962.1 GeneID:74013 MGI:1921263
definition	codon_start : 1 product : raftlin family member 2 protein_id : NP_082989.1

name	Mars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425166 CCDS:CCDS14963.1 GeneID:212679 MGI:2444136
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 product : mitochondrial methionyl-tRNA synthetase protein_id : NP_780648.1

name	Boll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077047 GeneID:75388 MGI:1922638
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence ISS]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 product : bol, boule-like protein_id : NP_083543.1

name	EG632964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233846 GeneID:632964 MGI:3645964
definition	codon_start : 1 product : similar to Btf3 protein protein_id : XP_994268.2

name	(CDS detail)
type	STS
link
xref	UniSTS:165730
definition	standard_name : AW046457

name	(CDS detail)
type	STS
link
xref	UniSTS:498358
definition	standard_name : Stk17b

name	(CDS detail)
type	STS
link
xref	UniSTS:209899
definition	standard_name : RH135901

name	(CDS detail)
type	STS
link
xref	UniSTS:224479
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162180
definition	standard_name : RH125358

name	(CDS detail)
type	STS
link
xref	UniSTS:224299
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:160910
definition	standard_name : RH114823

name	(CDS detail)
type	STS
link
xref	UniSTS:234126
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234128
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:209419
definition	standard_name : BB257479

name	(CDS detail)
type	STS
link
xref	UniSTS:161646
definition	standard_name : RH124824

name	(CDS detail)
type	STS
link
xref	UniSTS:207157
definition	standard_name : AW990637

name	(CDS detail)
type	STS
link
xref	UniSTS:226068
definition	standard_name : Sf3b1

name	(CDS detail)
type	STS
link
xref	UniSTS:167578
definition	standard_name : D8Ertd563e

name	(CDS detail)
type	STS
link
xref	UniSTS:178391
definition	standard_name : AV002237

name	(CDS detail)
type	STS
link
xref	UniSTS:217066
definition	standard_name : RH133783

name	(CDS detail)
type	STS
link
xref	UniSTS:210798
definition	standard_name : RH127488

name	(CDS detail)
type	STS
link
xref	UniSTS:181116
definition	standard_name : AW108200

name	(CDS detail)
type	STS
link
xref	UniSTS:161042
definition	standard_name : RH124220

name	(CDS detail)
type	STS
link
xref	UniSTS:249713
definition	standard_name : AA818419

name	(CDS detail)
type	STS
link
xref	UniSTS:222324
definition	standard_name : RH140245

name	(CDS detail)
type	STS
link
xref	UniSTS:207160
definition	standard_name : AI839641

name	(CDS detail)
type	STS
link
xref	UniSTS:207159
definition	standard_name : AI853746

name	(CDS detail)
type	STS
link
xref	UniSTS:207158
definition	standard_name : AI317354

name	(CDS detail)
type	STS
link
xref	UniSTS:273229
definition	standard_name : PMC34683P1

name	(CDS detail)
type	STS
link
xref	UniSTS:224188
definition

name	LOC381258 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233843 GeneID:381258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033385.1

name	LOC666793 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233887 GeneID:666793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 474 ESTs, 3 Proteins product : similar to ribosomal protein S24 pseudo : _no_value transcript_id : XR_033941.1

name	LOC667237 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233847 GeneID:667237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins product : similar to aldose reductase pseudo : _no_value transcript_id : XR_033419.1

clone name	MSMg01-407J13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263L04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-513L13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-493C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-160O23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-479E01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-232O15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-343L07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-500O12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-095N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140D02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-452L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-054B10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-483E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-097N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379J03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-132G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253B23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-340A12.b	B6Ng01-340A12.g
ACC	GA123861	GA123862
length	728	1,121
definition	B6Ng01-340A12.b	B6Ng01-340A12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcatgaaattcttaggcaaatggatacatctggaggatatcatcct gagtgaggtaacccaatcacaaaagaacactcatgatatgcactcattga taagtggatattaacccagaaacttagaatacccaagatacaattctcaa aacacatgaaactcaagaagaaggaagaccaaagtgtggatacttcattc cttcttagaatggggggaaaatatccatggaaggagttacagagacaaag ttctgagctgagatggaaggaaggaccatccagagactgctccacctggg gatccataccatatacaaccaccaaacccagacactattgcatatgccag caagattttcccaacaggacccagatatagttgtctcttatgaggctatg ccagtgcctggcaaatacagaagtggatgctcacagtcatctattggatg gaacacagagcccctaaagaagaggctagagaaagtacccaaggagctaa agaggtctgcaaccctataggaggaaaaataatatgaactaaccagtacc cacacccccccccagaactgtgtctctagttgcatatgtagcagaggatg gcctagtcggccatcaatgggaggagagaggcccttggtctttcgaagat tatatgccccagtacatgggaatgccagggccaggaagcaggagtaggtg ggttggggagcagggtagggggagggta	gaattcagtaactagcttttaggttaagacatacatctacacatattctc gagctgcattttagaagtctatctggctcttcagcatgatgctgtaacag attcagaaagttggcaacttacagtttttaatctctgaaagtaaacaaaa catggctgtttgctattcctcatcaaatatacttctaaaggaaatactcc caaaatatatttcttaaaaaaaaatgcttttaagactttttacaagagca cagtccagaacatctattagctgattttttttttttacttaaatataaaa ctctaaagctattgtttaccttaattgttggtaacagctcagctttccat gacaaatcaaccccttgccggctttgaaataaatatgaagatataattag agggcaaatgttcaagcattgtaatttgcaaacaaactttagaataaaaa gacagcatctgcagccctgtagacgagaggctgcagttacaatgactatg aagtctaatgtgtaagcccacaaagttcccttggtgaagaaaaaaaaagc tattggtttttcttaacaagcaattagtttgatgtttaaaaaaattacta gtgtataaatttccttgtgttttcatttaagaaacaatgccagaaccagt aagatgagtcagctagaaaaagcacttgtagagcaagcttgacaacctga acccagaataaaagaggagggccaactccaacagctgatctttgaacttc acacatatgtcatggcaagtgtactcttgtatgcacacatatacacatgc atgatgcactcacacacatacatgcaaacacacacagagcacatgtatac attcatatacatgcacatacatatgtatccacatatacatgctcatacat gcacaatacatacacacacacatacacacacaaaaattaaaatttaaaat ataaaattataatctgaaacagtagcataataaacatatgagcatataaa gcttttctagctattttgttgtggttcatgtctgtaatttcaatactggg ggaggctaatgcaaataacagtgtgagttcagctagcaggagcttacaca gtagtcagaacagctgggcta
quality values	Open. Hide. 62 47 27 37 62 39 31 47 62 49 62 37 47 62 62 62 62 59 62 44 62 62 62 62 59 62 62 59 49 51 59 43 28 32 42 49 54 54 62 62 59 39 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 54 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 58 49 58 58 58 58 52 52 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 52 58 31 58 49 35 58 58 42 58 58 58 49 58 58 58 46 39 58 50 58 53 53 53 53 58 58 58 49 37 58 54 40 58 52 58 51 35 20 41 58 54 43 41 48 49 53 58 58 58 50 50 58 58 50 44 41 53 53 53 53 58 58 50 43 58 58 49 51 52 52 53 50 58 58 58 35 54 44 49 54 33 46 37 46 54 54 50 51 45 52 50 54 54 52 53 53 30 54 51 32 49 54 42 54 52 54 54 38 52 53 54 54 49 54 54 54 51 51 28 49 38 27 29 13 25 31 54 54 34 29 40 11 9 6	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr1_54580841_54581965
seq2: B6Ng01-340A12.g_66_1186

seq1  GAATTCAGTAACTAGCTTTTAGGTTAAGACATACATCTACACATATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAACTAGCTTTTAGGTTAAGACATACATCTACACATATTCTC  50

seq1  GAGCTGCATTTTAGAAGTCTATCTGGCTCTTCAGCATGATGCTGTAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCATTTTAGAAGTCTATCTGGCTCTTCAGCATGATGCTGTAACAG  100

seq1  ATTCAGAAAGTTGGCAACTTACAGTTTTTAATCTCTGAAAGTAAACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAAGTTGGCAACTTACAGTTTTTAATCTCTGAAAGTAAACAAAA  150

seq1  CATGGCTGTTTGCTATTCCTCATCAAATATACTTCTAAAGGAAATACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGTTTGCTATTCCTCATCAAATATACTTCTAAAGGAAATACTCC  200

seq1  CAAAATATATTTCTTAAAAAAAAATGCTTTTAAGACTTTTTACAAGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATATTTCTTAAAAAAAAATGCTTTTAAGACTTTTTACAAGAGCA  250

seq1  CAGTCCAGAACATCTATTAGCTGATTTTTTTTTTTTACTTAAATATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAGAACATCTATTAGCTGATTTTTTTTTTTTACTTAAATATAAAA  300

seq1  CTCTAAAGCTATTGTTTACCTTAATTGTTGGTAACAGCTCAGCTTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGCTATTGTTTACCTTAATTGTTGGTAACAGCTCAGCTTTCCAT  350

seq1  GACAAATCAACCCCTTGCCGGCTTTGAAATAAATATGAAGATATAATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCAACCCCTTGCCGGCTTTGAAATAAATATGAAGATATAATTAG  400

seq1  AGGGCAAATGTTCAAGCATTGTAATTTGCAAACAAACTTTAGAATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAATGTTCAAGCATTGTAATTTGCAAACAAACTTTAGAATAAAAA  450

seq1  GACAGCATCTGCAGCCCTGTAGACGAGAGGCTGCAGTTACAATGACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCATCTGCAGCCCTGTAGACGAGAGGCTGCAGTTACAATGACTATG  500

seq1  AAGTCTAATGTGTAAGCCCACAAAGTTCCCTTGGTGAAGAAAAAAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAATGTGTAAGCCCACAAAGTTCCCTTGGTGAAGAAAAAAAAAGC  550

seq1  TATTGGTTTTTCTTAACAAGCAATTAGTTTGATGTTTAAAAAAATTACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTTTTCTTAACAAGCAATTAGTTTGATGTTTAAAAAAATTACTA  600

seq1  GTGTATAAATTTCCTTGTGTTTTCATTTAAGAAACAATGCCAGAACCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAAATTTCCTTGTGTTTTCATTTAAGAAACAATGCCAGAACCAGT  650

seq1  AAGATGAGTCAGCTAGAAAAAGCACTTGTAGAGCAAGCTTGACAACCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGTCAGCTAGAAAAAGCACTTGTAGAGCAAGCTTGACAACCTGA  700

seq1  ACCCAGAATAAAAGAGGAGGGCCAACTCCAACAGCTGATCTTTGAACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAATAAAAGAGGAGGGCCAACTCCAACAGCTGATCTTTGAACTTC  750

seq1  ACACATATGTCATGGCAAGTGTACTCTTGTATGCACACATATACACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGTCATGGCAAGTGTACTCTTGTATGCACACATATACACATGC  800

seq1  ATGATGCACTCACACACATACATGCAAACACACACAGAGCACATGTATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCACTCACACACATACATGCAAACACACACAGAGCACATGTATAC  850

seq1  ATTCATATACATGCACATACATATGTATCCACATATACATGCTCATACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATACATGCACATACATATGTATCCACATATACATGCTCATACAT  900

seq1  GCACAATACATACACACACACATACACACACAAAAATTAAAATTTAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATACATACACACACACATACACACACAAAAATTAAAATTTAAAAT  950

seq1  ATAAAAATTATAATCTGAAACAGTAGCATAATAAACATATGAGCATATAA  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-AAAATTATAATCTGAAACAGTAGCATAATAAACATATGAGCATATAA  999

seq1  AGCTTTTCTAGCTA-TTTGTTGTGGTTCATGTCTGTAATTTCAATACT-G  1048
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  AGCTTTTCTAGCTATTTTGTTGTGGTTCATGTCTGTAATTTCAATACTGG  1049

seq1  GGGAGGCTAATGCAAATAACAGTGTGAGTTCCAGGCTAGCCAGAGC-TAC  1097
      |||||||||||||||||||||||||||||||   ||||||  |||| |||
seq2  GGGAGGCTAATGCAAATAACAGTGTGAGTTC--AGCTAGCAGGAGCTTAC  1097

seq1  ACAGTAAGTTCCAGAACAGCTTGGGCTA  1125
      ||||| |||  ||||||||| |||||||
seq2  ACAGT-AGT--CAGAACAGC-TGGGCTA  1121

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information