BAC Information

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BAC

Clone NameB6Ng01-341L11
Chromosome1 (Build37)
Map Location 52,606,992 - 52,607,507
singlet/doubletsinglet
Overlap geneGm553
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, LOC100042094
Downstream geneEG433305, 5330401P04Rik, 2210010L05Rik, Inpp1, Hibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341L11.bB6Ng01-341L11.g
ACCGA125018GA125019
length1,001510
definitionB6Ng01-341L11.b B6Ng01-341L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgcctaagccaggcatggtggcacacacctttaatcccagc
acttgggaggcagaggcaggtgaatttctgagtttgaggccagcctggtc
tacagagtgagttccaggacagccagggctacacatagaaaccctgtctc
aaaacaaacaaacaaacaaacaaacaaacaaaacaaaacagagaattctt
tgtttagctctgtatctaatttttaataggtttatttggttctctggagt
ctaacttcttgagttctttgtatattttggatatcagccctctattgggt
gtagggttagaaagatcttttcccaatttgcagattgccattttgtccta
ttgacagtgtcatttgccttatagaagctttttaatattatgaggtccca
tttgtcaattgttgatattagagcctgagccattggtattctgttcagga
aaatttccactgtgcttatgtgttcgaggctatttctcactttcttttct
gttaggtaaagcatatctggttttgtgtggaggtccttgatccacttgga
cttgagctttgtacagggagataagaatggatgaatttgcattcttctac
atgttgaatgccagttgaactgaaagatcctgacagaatgtaaaaggtca
cagaagccctgaaattggcaaaatagatttcattgttagcagaactagct
tcactgatttagaaaaatagaggtgcacaatgctctggccactccttgaa
cctgtgtgtctgccaatgttttgaccgttccttgaacccatgtgtgtgcc
cactgatgaagcccattgccaggtgtttgtgatattggttgctgagaaga
gtcagaaaatctccccagcaaccacagcctggccaatcctgagttgctac
acctgcaccagactctttccttgtaccctctcatacccatttcttgagaa
tagacattgtctagatctggaaatccctactctcctcttctctttttccc
c
tactttcttcctctttaacatttcaaagaaagcaaggcttttttgcatta
atcttttcatctcagtagatgtcagatctagaagaaagccacagataatg
aaaggtctactttcaattaccatctcaaagtatcttctttttgacccact
atagtattcactatactttatatttttctgtattgactattgattgattg
attagtgatctgctaagtatcagtcaggagaatgcattaacttccaaaac
ttgaaaacatgctaattttaactttcattttcacttgccttttagagctc
acatctttcatgttcatggcttggcctccaacctggcattgacttacttg
ggtatgtaggaattctgcaaagcagtccagttggtacaagccaggtattc
ataggatttcatgcatcagggtctatgttagaagctttccaagtggaggc
atgtgtaacctatggcaagctggcaaaggtggccaggtctccacttactc
actggctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52606992_52607507
seq2: B6Ng01-341L11.g_70_585 (reverse)

seq1  GGGAGCCAGTGAGTAAGTGGAGACCTGGCCACCTTTGCCAGCTTGCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCAGTGAGTAAGTGGAGACCTGGCCACCTTTGCCAGCTTGCCATA  50

seq1  GGTTACACATGCCTCCACTTGGAAAGCTTCTAACATAGACCCTGATGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACACATGCCTCCACTTGGAAAGCTTCTAACATAGACCCTGATGCAT  100

seq1  GAAATCCTATGAATACCTGGCTTGTACCAACTGGACTGCTTTGCAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCTATGAATACCTGGCTTGTACCAACTGGACTGCTTTGCAGAATT  150

seq1  CCTACATACCCAAGTAAGTCAATGCCAGGTTGGAGGCCAAGCCATGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATACCCAAGTAAGTCAATGCCAGGTTGGAGGCCAAGCCATGAACA  200

seq1  TGAAAGATGTGAGCTCTAAAAGGCAAGTGAAAATGAAAGTTAAAATTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGTGAGCTCTAAAAGGCAAGTGAAAATGAAAGTTAAAATTAGC  250

seq1  ATGTTTTCAAGTTTTGGAAGTTAATGCATTCTCCTGACTGATACTTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCAAGTTTTGGAAGTTAATGCATTCTCCTGACTGATACTTAGCA  300

seq1  GATCACTAATCAATCAATCAATAGTCAATACAGAAAAATATAAAGTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTAATCAATCAATCAATAGTCAATACAGAAAAATATAAAGTATAG  350

seq1  TGAATACTATAGTGGGTCAAAAAGAAGATACTTTGAGATGGTAATTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACTATAGTGGGTCAAAAAGAAGATACTTTGAGATGGTAATTGAAA  400

seq1  GTAGACCTTTCATTATCTGTGGCTTTCTTCTAGATCTGACATCTACTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCTTTCATTATCTGTGGCTTTCTTCTAGATCTGACATCTACTGAG  450

seq1  ATGAAAAGATTAATGCAAAAAAGCCTTGCTTTCTTTGAAATGTTAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGATTAATGCAAAAAAGCCTTGCTTTCTTTGAAATGTTAAAGAG  500

seq1  GAAGAAAGTAGAATTC  516
      ||||||||||||||||
seq2  GAAGAAAGTAGAATTC  516