MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-342N01
Chromosome	1 (Build37)
Map Location	14,061,281 - 14,131,638
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Prdm14, Ncoa2, LOC665341, LOC100039812, EG621685, Tram1, Lactb2, Xkr9, LOC100039843, EG433273, LOC100039859, LOC100039869
Downstream gene	Eya1, LOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949
Link	Open Mouse BAC browser

Click to get alignment info.

name	Prdm14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncoa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG621685 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621685 MGI:3647915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Tram1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72265 MGI:1919515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lactb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212442 MGI:2442551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xkr9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381246 MGI:2686466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG433273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433273 MGI:3649089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 131 ESTs, 16 Proteins

name	LOC100039859 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039859
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins

name	LOC100039869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Eya1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14048 MGI:109344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Msc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17681 MGI:1333884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smt3h2-ps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114607 MGI:2149598
definition	note : SMT3 suppressor of mif two 3 homolog 2, pseudogene 4 (S. cerevisiae) pseudo : _no_value

name	EG665407 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665407 MGI:3647110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1781 ESTs, 11 Proteins

name	Trpa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277328 MGI:3522699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG269105 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269105 MGI:3642999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 221 ESTs, 1 Protein

name	LOC100039949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Prdm14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487082 GeneID:383491 MGI:3588194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 14 transcript_id : NM_001081209.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026943 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_001077695.1

name	Ncoa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026939 GeneID:17978 MGI:1276533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 2 transcript_id : NM_008678.2

name	EG621685 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233610 GeneID:621685 MGI:3647915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG621685 transcript_id : XM_886085.3

name	Tram1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802711 GeneID:72265 MGI:1919515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocating chain-associating membrane protein 1 transcript_id : NM_028173.2

name	Lactb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130117 GeneID:212442 MGI:2442551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactamase, beta 2 transcript_id : NM_145381.2

name	Xkr9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131129 GeneID:381246 MGI:2686466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X Kell blood group precursor related family member 9 homolog transcript_id : NM_001011873.2

name	LOC100039859 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233612 GeneID:100039859
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins product : hypothetical protein LOC100039859 transcript_id : XM_001473671.1

name	Eya1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579836 GeneID:14048 MGI:109344
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eyes absent 1 homolog (Drosophila) transcript_id : NM_010164.2

name	Msc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130167 GeneID:17681 MGI:1333884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : musculin transcript_id : NM_010827.2

name	EG665407 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233616 GeneID:665407 MGI:3647110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1781 ESTs, 11 Proteins product : predicted gene, EG665407 transcript_id : XM_976689.2

name	Trpa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348024 GeneID:277328 MGI:3522699
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily A, member 1 transcript_id : NM_177781.3

name	EG269105 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362765 GeneID:269105 MGI:3642999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 221 ESTs, 1 Protein product : predicted gene, EG269105 transcript_id : XM_886378.2

name	Prdm14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487083 GeneID:383491 MGI:3588194
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : PR domain containing 14 protein_id : NP_001074678.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026944 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform b protein_id : NP_001071163.1

name	Ncoa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026940 GeneID:17978 MGI:1276533
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; glucocorticoid receptor interacting protein 1; transcriptional intermediary factor 2; TIF2/GRIP-1; glucocorticoid receptor-interacting protein 1 product : nuclear receptor coactivator 2 isoform a protein_id : NP_032704.2

name	EG621685 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233611 GeneID:621685 MGI:3647915
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_891178.3

name	Tram1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794386 CCDS:CCDS14822.1 GeneID:72265 MGI:1919515
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocating chain-associating membrane protein 1 protein_id : NP_082449.1

name	Lactb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703764 CCDS:CCDS14823.1 GeneID:212442 MGI:2442551
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : lactamase, beta 2 protein_id : NP_663356.1

name	Xkr9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59676597 CCDS:CCDS14824.1 GeneID:381246 MGI:2686466
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : XK-related protein 9 protein_id : NP_001011873.1

name	LOC100039859 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233613 GeneID:100039859
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473721.1

name	Eya1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579837 GeneID:14048 MGI:109344
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IDA] GO_process : GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0001656 - metanephros development [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006470 - protein amino acid dephosphorylation [Evidence IDA]; GO:0045664 - regulation of neuron differentiation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IGI] codon_start : 1 product : eyes absent 1 protein_id : NP_034294.2

name	Msc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754740 CCDS:CCDS14825.1 GeneID:17681 MGI:1333884
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : musculin protein_id : NP_034957.1

name	EG665407 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362762 GeneID:665407 MGI:3647110
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981783.1

name	Trpa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244298 GeneID:277328 MGI:3522699
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0009409 - response to cold [Evidence IDA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0050955 - thermoception [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ANKTM1 product : transient receptor potential cation channel, subfamily A, member 1 protein_id : NP_808449.1

name	EG269105 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82795451 GeneID:269105 MGI:3642999
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891471.1

name	LOC665341 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665341
definition	number : 1 pseudo : _no_value

name	LOC100039812 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039812
definition	number : 1 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 7 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 6 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 5 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 4 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 3 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 2 pseudo : _no_value

name	LOC100039843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039843
definition	number : 1 pseudo : _no_value

name	LOC100039869 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039869
definition	number : 2 pseudo : _no_value

name	LOC100039869 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039869
definition	number : 1 pseudo : _no_value

name	LOC665391 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665391
definition	number : 1 pseudo : _no_value

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 1 pseudo : _no_value

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 2 pseudo : _no_value

name	LOC100039949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039949
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:234072
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207126
definition	standard_name : C86124

name	(CDS detail)
type	STS
link
xref	UniSTS:167273
definition	standard_name : RH127265

name	(CDS detail)
type	STS
link
xref	UniSTS:158775
definition	standard_name : AF000582

name	(CDS detail)
type	STS
link
xref	UniSTS:271621
definition	standard_name : PMC170950P3

name	(CDS detail)
type	STS
link
xref	UniSTS:270698
definition	standard_name : PMC133972P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128926
definition	standard_name : D1Mit67

name	(CDS detail)
type	STS
link
xref	UniSTS:128925
definition	standard_name : D1Mit66

name	(CDS detail)
type	STS
link
xref	UniSTS:128927
definition	standard_name : D1Mit68

name	(CDS detail)
type	STS
link
xref	UniSTS:123253
definition	standard_name : 15.MMHAP20FRE9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:234070
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128538
definition	standard_name : A26

name	(CDS detail)
type	STS
link
xref	UniSTS:123042
definition	standard_name : 10.MMHAP67FLD1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:214443
definition	standard_name : RH131160

name	(CDS detail)
type	STS
link
xref	UniSTS:158776
definition	standard_name : U61110

name	(CDS detail)
type	STS
link
xref	UniSTS:185431
definition	standard_name : C86010

name	(CDS detail)
type	STS
link
xref	UniSTS:124145
definition	standard_name : 35.MMHAP50FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128799
definition	standard_name : D1Mit430

name	(CDS detail)
type	STS
link
xref	UniSTS:125958
definition	standard_name : mHAa23g1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124196
definition	standard_name : RH118238

name	(CDS detail)
type	STS
link
xref	UniSTS:128650
definition	standard_name : D1Mit297

name	EG433273 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233614 GeneID:433273 MGI:3649089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 131 ESTs, 16 Proteins product : predicted gene, EG433273 transcript_id : XR_001547.2

clone name	MSMg01-383H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-317H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-342N01.b	B6Ng01-342N01.g
ACC	GA125779	GA125780
length	1,124	1,092
definition	B6Ng01-342N01.b	B6Ng01-342N01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(14,130,516 - 14,131,638)	(14,061,281 - 14,062,115)
sequence	gaattccaagcagtggccataagtcagtcattgattataggcagatctgt ttaattccatggtttggcaaatacagaattttttagcttgttccattttt aagtttaattttatttgaaacaaacttccttgtctcctctgattgtcctg ctccatgaacttccaggcatacctatatttgctgagagataacaaggctt cgaggtacacatttccctttctcaccctgtttcttctgcagcttcccagc tgagtggggcttcctttgcaacttcttggaaatgtgggagtgtttcccag ggctgtgctgagaattagccacagttggaaaagcactaggagagattttg atgaaagtctccatgggcctacaacagaatgcaacagaatgtttagaaag tcatgtagcttggctccactcttcagattggcgaggctctgttctaaagt gactactgtgcttccattccaatggatcacagtccagtgctggtcacagc acggaaacagtttgagtgggaagagactggagaagagcctggaggctgct cacttcagtctctgtgctaacctgggggcaggggacacaccaatatggta aatagctaaatgaaaagtgagattcaaagaggctgggggcagataaaaga acagtgactgctctccttttatggcctacttaggattgaactgccccccc ccttttctctcagccttgtttatagatgttaaatgacagtgaggaccctt ttatttttaaaaaggttcttaatggagaattcatttgatcatggttgaga ggtgattaaagttaggtcaaaccttgtgatctcaaagtcattttaattaa agatcctaacatttgtcccacaaatgtggagtgtcagagaatggtgtttt ctttagaacacttaataaccgtcatattaacaattaccttacattcaatg atatttgggaactctgcatgttcatattaatggagctattagaatacctc acctgtgccctagccaggtcataaacccatatttatccccatataacgaa taagccattacctcagtatgaaaaggcagatgaagtaaccccttgacttc ctgtctattgtagcctgaattgaa	gaattcactccctagactgtagactctgtagattgagttcaaggtcagat cttgaactcatagagatctgcctgcctctgccttgctagtgctgggatta aagcatcactcaactagagactggatactttaaagagactgaaattttaa tgtgtttgaatttgtaaagactgaaggacttttaaagttatctatgtttt ttaatgtgagatcttggggatgaataagaaaggaaaggtgtggctcaata gtgatgtgcttggatatcaagttaacacagtgtcagttgtactggctagt cttatgccagcctgacgaacaagaattatctgaaagaagggcatcttaat taagaaaatgcctccataagttctgactgtaaggcatgttcttaattaat gattgactggggaggccccagtctattgtagttgggcaggtagtactggg ttctataagaaagcaggcagagcaagctatggaaagcgaggcagtaaaca gcacacacacacacacacacacacacacacacacacacacacacacatac acatacacacacacacacacacacacacacacacggtctctgctgttttc ataagctcctgcctctaggttcctgcctgcttgagttcctgtcctgactt cattcaatgacgaacagcaatatgaaagtataaaccaaataaacccgttc ctccccaactggcttttttggtcatggcgtttttgatgcagcagtagaca cactaactaagaaggcctgtagatctgtcgattgatctgtctgtctgtct gtctatctgtctgcctgcctgcctgcttgcctgtccgtccgtccatccat ccatccatccatccatccatccatccatccatccatccatccatccatct atctatctatctatctatctatctatctatctatctatcaatctatcacc tatctatctatctaggttttggtagtagagtgatactagcttttatagga gtttggtagtgcttgctttgtttctttctcattgatgacatattataata gattaaggactgatgtcctctttgagtgtctattagaactct
quality values	Open. Hide. 58 42 31 31 58 58 28 12 42 58 54 42 58 58 62 47 47 39 41 62 62 62 47 62 49 41 54 62 48 62 47 62 62 37 47 54 56 62 49 62 49 62 49 62 54 59 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 54 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 49 58 58 58 54 58 58 54 45 58 58 58 58 52 58 58 52 58 54 54 58 58 58 58 58 49 58 54 58 58 58 58 54 54 54 58 58 54 49 52 58 58 58 58 58 58 58 58 58 54 52 54 54 58 58 58 58 58 58 58 52 54 49 58 58 58 58 50 52 58 53 58 51 49 58 58 51 58 58 49 50 58 58 58 53 45 42 58 51 58 58 52 51 58 58 38 29 58 41 39 58 58 47 36 25 58 51 51 58 49 49 58 32 51 40 53 51 58 58 58 58 50 52 41 51 53 39 58 58 58 50 58 50 50 53 41 39 58 39 50 51 58 50 54 52 53 52 51 52 58 58 52 42 39 44 54 37 54 33 37 29 58 43 32 28 58 33 19 50 49 52 49 45 53 51 42 54 54 54 54 54 54 54 54 50 54 54 37 37 34 41 42 40 33 29 52 54 30 35 42 37 54 32 42 53 31 52 42 33 53 35 44 37 54 49 40 52 52 45 39 29 37 39 51 24 51 34 18 54 51 52 54 54 37 37 26 54 54 54 53 33 54 54 49 33 32 51 29 28 39 42 31 32 30 40 52 31 41 32 35 46 32 31 32 31 53 53 53 45 31 40 34 33 32 31 36 25 22 32 51 23 33 7 38 28 31 27 23 31 33 46 31 31 36 31 28 41 42 36 41 38 51 31 26 31 36 38 41 25 35 32 31 32 31 34 31 48 33 25 31 32 33 43 48 48 42 27 22 35 30 9 47 46 32 31 30 27 27 28 31 30 31 22 37 48 43 42 22 16 46 41 35 31 25 41 23 21 41 25 22 26 37 17 30 36 12 30 38 19 33 9 33 35 28 34 33 14 28 32 46 48 33 31 18 46 31 25 7 38 31 27 25 32 8 24 12 14 15 7 35 14 10 31 31 36 26 31 21 31 31 26 21 22 7 31 9 14 21 13 33 14 24 18 12 13 22 29 20 8 29 16 21 8 6 8 7 31 24 6 36 13 29 29 9 9 22 31 32 34 31 14 32 10 25 11 9 32 21 11 38 12 10 16 6 6 14 10 24 25 12 8 27 19 6 6 24 14 18 25 9 13 19 11 9 9 10 33 10 20 15 40 27 17 15 20 24 8 25 12 20 13 26 13 10 7 31 16 24 21 15 12 3 3 3 3 10 11 5 18 23 25 18 20 13 8 25 6 6 6 6 8 20 27 13 21 7 10 7 30 5 5 14 4 4 7 17 10 6 6 6 16 15 12 20 23 15 4 9 8 5 7 17 10 10 14 14 2 3 12 10 10 28 17 22 4 8 11 11 9 17 17 6 8 6 18 16 17 23 8 5 4 3 3 5 4 15 15 10 6 2 3 11 14 6 4 17	Open. Hide. 62 49 56 42 62 37 31 54 62 62 62 62 44 47 56 44 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 51 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 54 54 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 42 54 62 62 62 62 62 54 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 56 62 62 62 62 62 62 62 49 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 54 58 49 54 58 52 58 52 54 58 58 58 54 58 52 47 48 52 49 48 48 52 52 52 52 52 52 54 52 52 48 54 52 54 52 54 52 54 54 58 54 58 54 54 52 49 50 51 51 54 50 58 53 58 51 49 48 49 49 51 37 51 47 48 50 50 46 45 42 58 50 51 50 49 42 52 52 54 50 49 48 54 50 49 48 49 50 51 51 58 51 58 51 58 50 58 49 51 54 58 54 51 54 51 48 49 50 54 51 53 51 41 46 32 49 53 51 58 50 58 49 51 51 50 44 27 44 50 53 46 41 43 49 43 40 33 58 50 50 50 51 49 58 49 53 53 51 58 50 51 50 39 39 50 54 40 31 42 44 44 31 38 49 54 41 33 54 54 52 41 44 50 54 51 52 39 54 54 35 40 49 52 39 50 54 52 51 51 51 51 51 40 53 52 53 40 54 46 47 54 37 54 41 51 38 51 53 54 46 42 34 28 32 42 54 42 40 54 54 33 32 39 33 30 41 40 29 47 53 53 49 46 32 33 49 31 45 33 32 28 46 32 47 40 40 51 53 46 35 42 32 37 34 28 26 32 52 24 33 42 23 33 31 22 14 14 18 17 14 33 30 31 25 31 13 33 45 7 22 18 51 23 46 31 45 16 36 35 43 31 51 30 41 15 28 26 34 40 41 38 42 31 46 19 38 37 46 31 42 42 46 24 42 31 31 27 31 31 42 43 42 31 46 26 24 31 43 25 20 19 43 31 33 24 39 19 46 18 36 21 27 16 39 18 44 29 39 28 29 19 38 21 13 33 39 36 44 30 27 39 18 35 26 36 33 24 21 28 31 23 20 36 17 34 31 38 29 31 29 35 38 12 10 36 19 24 30 38 18 37 25 32 27 27 25 32 11 16 7 10 19 25 20 31 30 18 9 30 22 22 29 19 19 6 32 17 30 7 33 24 32 16 22 12 31 9 33 31 31 16 34 20 17 8 34 13 28 9 34 23 29 5 19 31 27 5 22 32 28 7 34 16 17 7 7 5 33 6 4 5 4 4 9 27 9 22 20 11 11 27 28 28 21 13 5 9 15 28 13 13 20 27 28 17 13 3 3 5 20 8 20 19 26 8 7 14 8 5 14 27 24 26 23 26 25 27 21 14 11 7 7 13 21 14 7 21 28 9 19 13 5 16 11 7 21 24 7 17 13 6 5 11 6 4 3 12 14 13 13 17 10 7 6 9 16 10 9 16 4 11 11 14 6 12 19 9 14 22 18 8 5 3 5 12 5 5 13 7 14 10 9 11 18 10 9 23 23 8 13 3 8 7 11 11 11 19 15 6 11 6 5 12 8 14 7 5 2 11 15 4 5 20 7 12 5 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_14130516_14131638
seq2: B6Ng01-342N01.b_48_1171 (reverse)

seq1  TTCAATCCAGGCTACCACTAAGACAGAAAGTCCAGGGGTTACTTTCATCT  50
      |||||| |||||||| |   |||||| ||||| ||||||||| |||||||
seq2  TTCAATTCAGGCTACAA--TAGACAGGAAGTCAAGGGGTTAC-TTCATCT  47

seq1  GCCTTTTCATACTGAGTTTATTGCTTTATCTGTAATATGGGGATTAAAAT  100
      |||||||||||||||| | || || ||||  || ||||||||||  ||||
seq2  GCCTTTTCATACTGAGGTAATGGC-TTATTCGTTATATGGGGAT--AAAT  94

seq1  ATTGGGTTTATGACCTTGCTAGGGCACA-GTGA-GTA-TCTAATAGCTC-  146
      | |||||||||||||| ||||||||||| |||| ||| ||||||||||| 
seq2  A-TGGGTTTATGACCTGGCTAGGGCACAGGTGAGGTATTCTAATAGCTCC  143

seq1  -ATAATATGAACATGCAGAGTT-CCAAATATCATTGAATGTAAGGT-ATT  193
        |||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  ATTAATATGAACATGCAGAGTTCCCAAATATCATTGAATGTAAGGTAATT  193

seq1  GTTAATATGAC-GTTATTAAGTGTTCTAAAGAAAACACCATTCTCTGACA  242
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATGACGGTTATTAAGTGTTCTAAAGAAAACACCATTCTCTGACA  243

seq1  CTCCACATTTGTGGGACAAATGTTAGGATCTTTAATTAAAATGACTTTGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATTTGTGGGACAAATGTTAGGATCTTTAATTAAAATGACTTTGA  293

seq1  GATCACAAGGTTTGACCTAACTTTAATCACCTCTCAACCATGATCAAATG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAAGGTTTGACCTAACTTTAATCACCTCTCAACCATGATCAAATG  343

seq1  AATTCTCCATTAAGAACCTTTTTAAAAATAAAAGGGTCCTCACTGTCATT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCATTAAGAACCTTTTTAAAAATAAAAGGGTCCTCACTGTCATT  393

seq1  TAACATCTATAAACAAGGCTGAGAGAAAAGGGGGGGGGCAGTTCAATCCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTATAAACAAGGCTGAGAGAAAAGGGGGGGGGCAGTTCAATCCT  443

seq1  AAGTAGGCCATAAAAGGAGAGCAGTCACTGTTCTTTTATCTGCCCCCAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGCCATAAAAGGAGAGCAGTCACTGTTCTTTTATCTGCCCCCAGC  493

seq1  CTCTTTGAATCTCACTTTTCATTTAGCTATTTACCATATTGGTGTGTCCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAATCTCACTTTTCATTTAGCTATTTACCATATTGGTGTGTCCC  543

seq1  CTGCCCCCAGGTTAGCACAGAGACTGAAGTGAGCAGCCTCCAGGCTCTTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCAGGTTAGCACAGAGACTGAAGTGAGCAGCCTCCAGGCTCTTC  593

seq1  TCCAGTCTCTTCCCACTCAAACTGTTTCCGTGCTGTGACCAGCACTGGAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTCTTCCCACTCAAACTGTTTCCGTGCTGTGACCAGCACTGGAC  643

seq1  TGTGATCCATTGGAATGGAAGCACAGTAGTCACTTTAGAACAGAGCCTCG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCATTGGAATGGAAGCACAGTAGTCACTTTAGAACAGAGCCTCG  693

seq1  CCAATCTGAAGAGTGGAGCCAAGCTACATGACTTTCTAAACATTCTGTTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGAAGAGTGGAGCCAAGCTACATGACTTTCTAAACATTCTGTTG  743

seq1  CATTCTGTTGTAGGCCCATGGAGACTTTCATCAAAATCTCTCCTAGTGCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTTGTAGGCCCATGGAGACTTTCATCAAAATCTCTCCTAGTGCT  793

seq1  TTTCCAACTGTGGCTAATTCTCAGCACAGCCCTGGGAAACACTCCCACAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACTGTGGCTAATTCTCAGCACAGCCCTGGGAAACACTCCCACAT  843

seq1  TTCCAAGAAGTTGCAAAGGAAGCCCCACTCAGCTGGGAAGCTGCAGAAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGAAGTTGCAAAGGAAGCCCCACTCAGCTGGGAAGCTGCAGAAGA  893

seq1  AACAGGGTGAGAAAGGGAAATGTGTACCTCGAAGCCTTGTTATCTCTCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGTGAGAAAGGGAAATGTGTACCTCGAAGCCTTGTTATCTCTCAG  943

seq1  CAAATATAGGTATGCCTGGAAGTTCATGGAGCAGGACAATCAGAGGAGAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAGGTATGCCTGGAAGTTCATGGAGCAGGACAATCAGAGGAGAC  993

seq1  AAGGAAGTTTGTTTCAAATAAAATTAAACTTAAAAATGGAACAAGCTAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTTTGTTTCAAATAAAATTAAACTTAAAAATGGAACAAGCTAAA  1043

seq1  AAATTCTGTATTTGCCAAACCATGGAATTAAACAGATCTGCCTATAATCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGTATTTGCCAAACCATGGAATTAAACAGATCTGCCTATAATCA  1093

seq1  ATGACTGACTTATGGCCACTGCTTGGAATTC  1123
      |||||||||||||||||||||||||||||||
seq2  ATGACTGACTTATGGCCACTGCTTGGAATTC  1124

seq1: chr1_14061281_14062115
seq2: B6Ng01-342N01.g_331_1158

seq1  TATCAAGTTAACACAGTGTCAGTTGTACTGGCTAGTCTTATGCCAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTTAACACAGTGTCAGTTGTACTGGCTAGTCTTATGCCAGCCTG  50

seq1  ACGAACAAGAATTATCTGAAAGAAGGGCATCTTAATTAAGAAAATGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACAAGAATTATCTGAAAGAAGGGCATCTTAATTAAGAAAATGCCTC  100

seq1  CATAAGTTCTGACTGTAAGGCATGTTCTTAATTAATGATTGACTGGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTCTGACTGTAAGGCATGTTCTTAATTAATGATTGACTGGGGAG  150

seq1  GCCCCAGTCTATTGTAGTTGGGCAGGTAGTACTGGGTTCTATAAGAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGTCTATTGTAGTTGGGCAGGTAGTACTGGGTTCTATAAGAAAGC  200

seq1  AGGCAGAGCAAGCTATGGAAAGCGAGGCAGTAAACAGCACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGCAAGCTATGGAAAGCGAGGCAGTAAACAGCACACACACACAC  250

seq1  ACACACACACACACACACACACACACACACACATACACATACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACATACACATACACACACAC  300

seq1  ACACACACACACACACACACGGTCTCTGCTGTTTTCATAAGCTCCTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACGGTCTCTGCTGTTTTCATAAGCTCCTGCCT  350

seq1  CTAGGTTCCTGCCTGCTTGAGTTCCTGTCCTGACTTCATTCAATGACGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTCCTGCCTGCTTGAGTTCCTGTCCTGACTTCATTCAATGACGAA  400

seq1  CAGCAATATGAAAGTATAAACCAAATAAACCCGTTCCTCCCCAACTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATATGAAAGTATAAACCAAATAAACCCGTTCCTCCCCAACTGGCT  450

seq1  TTTTTGGTCATGGCGTTTTTGATGCAGCAGTAGACACACTAACTAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTCATGGCGTTTTTGATGCAGCAGTAGACACACTAACTAAGAAG  500

seq1  GCCTGTAGATCTGTCGATTGATCTGTCTGTCTGTCTGTCTATCTGTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTAGATCTGTCGATTGATCTGTCTGTCTGTCTGTCTATCTGTCTGC  550

seq1  CTGCCTGCCTGCTTGCCTGTCCGTCCGTCCATCCATCCATCCATCCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCTGCTTGCCTGTCCGTCCGTCCATCCATCCATCCATCCATCC  600

seq1  ATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTAT  650

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTACCTATCTATCT  700
      ||||||||||||||||||||||||| |||||||     ||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCAATCTATC-----ACCTATCTATCT  695

seq1  ATCTA-GTTTTGGTAGTAGAGTGATACTAGC-TTTATAGGAGTTTGGTAG  748
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTAGGTTTTGGTAGTAGAGTGATACTAGCTTTTATAGGAGTTTGGTAG  745

seq1  TGC-TGCTTTGGTTTCTTTCTCATTGTTGACATTATTTATTAATAGTTTA  797
      ||| |||||| ||||||||||||||| ||||| ||||   |||||| |||
seq2  TGCTTGCTTT-GTTTCTTTCTCATTGATGACA-TATT--ATAATAGATTA  791

seq1  AGGACTGATGGTCCTCTTTGAGTGTCTATTAGAACTCT  835
      ||||||||| ||||||||||||||||||||||||||||
seq2  AGGACTGAT-GTCCTCTTTGAGTGTCTATTAGAACTCT  828

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Alignment Information