BAC Information

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BAC

Clone NameB6Ng01-342P07
Chromosome1 (Build37)
Map Location 51,642,712 - 51,643,719
singlet/doubletsinglet
Overlap genenone
Upstream geneTmeff2, Sdpr, LOC383504, Obfc2a
Downstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342P07.bB6Ng01-342P07.g
ACCGA125875GA125876
length1,0051,179
definitionB6Ng01-342P07.b B6Ng01-342P07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaggcatcagcctaccttagcctcccagcacaattaaagatgt
acaccaccacacctggcctgagttgttttcttctcatcatgaaccagtag
cgcctcatcacctgaggctctgtagaggccccacagttctgttcctcaga
ctgtaaggtcagcagtcgccatgtagctggccctagtgcactcatgggag
cactctcaattcatactgttctggttgtagcctctgtggcttcacagaga
gcagaacttcttctcttggggtttgatgagtcttagatcctgccaaagat
gaaaataccttgtcttcctcttggtcctgacaactttttaaaagtctaga
tctagttttcctgtcttaaaataatgggttaaccagggacagtccaaaga
gtctgaggctttggctggcaggagctctgtccagacagttgagctagacc
aaccacacagcctgaaggagaacctaacatagatttatttttcctgtctc
atcttgtttgattgatcaaagacttaacaatgaagatttggatgttactt
tctaatgcttggttctcaaatgaaagttgaataaaacctgacagttgtga
tgtcttccaaacttttaaatggtgattctaattcctcattagctccaatg
cacagccttagttttaccatgcaacagagaataaataagaggtacacaga
agtcttcataatgcttagactaaacaatgaatgcctactgaatatttgga
tattctatgtttggaattgtagacacagtttaacagaaacttgttattca
tagcaggagtagagacaacacaggaaacatcgtccggggcatcaacttat
gttggtcttttacagttagaatgaacacttaggcccaattcttttatcat
ctaggaatgccttgtggggagtgggtatctgatagagagatagactggac
tcatggagagctgctttcagatgtcagctggtccttctcttctctttttt
ttttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcttggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagctctatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
tagtatacccaagatataagatacaatttcctaaacagatgaaactcaag
aaaaatgaatactgaagtgtggacactatgcccctctttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgaccattgcatacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggagagctagagaagtaccaaggagctaaagggatctgcaacctataggt
gaacaacattatgaactaaccagtacccggagctctgactctagctgcat
atgtatcaaagatggctagtcagcatcactgcaagagagccattggaacc
gcaaatttatatgtccaatcaggtacgcagcaaggaaaggtgtgtaaggg
agtgcgcctctcacagaacatactgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_51642712_51643719
seq2: B6Ng01-342P07.b_49_1053 (reverse)

seq1  AAAAAAAAAAAGAAGAAGAAGAAGGAACCAGCTGACATCTGGAAGCAGCT  50
      |||||||||||| ||||| |||||| ||||||||||||||| ||||||||
seq2  AAAAAAAAAAAG-AGAAG-AGAAGG-ACCAGCTGACATCTGAAAGCAGCT  47

seq1  CTCCTAGGAGTCCAGTCTTATCTCTCTATCAGATACCCACT-CCCACCAG  99
      |||| | |||||||||| ||||||||||||||||||||||| ||||| ||
seq2  CTCC-ATGAGTCCAGTC-TATCTCTCTATCAGATACCCACTCCCCACAAG  95

seq1  GCATTCCTAGATGATAAAAGAATTGGGCCTAGGTGTTCATTCTAACTGTA  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCATTCCTAGATGATAAAAGAATTGGGCCTAAGTGTTCATTCTAACTGTA  145

seq1  AAAGACCAACATAAGTTGATGCCCCGGACGATGTTTCCTGTGTTGTCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCAACATAAGTTGATGCCCCGGACGATGTTTCCTGTGTTGTCTCT  195

seq1  ACTCCTGCTATGAATAACAAGTTTCTGTTAAACTGTGTCTACAATTCCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCTATGAATAACAAGTTTCTGTTAAACTGTGTCTACAATTCCAA  245

seq1  ACATAGAATATCC-AATATTCAGTAGGCATTCATTGTTTAGTCTAAGCAT  298
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACATAGAATATCCAAATATTCAGTAGGCATTCATTGTTTAGTCTAAGCAT  295

seq1  TATGAAGACTTCTGTGTACCTCTTATTTATTCTCTGTTGCATGGTAAAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGACTTCTGTGTACCTCTTATTTATTCTCTGTTGCATGGTAAAAC  345

seq1  TAAGGCTGTGCATTGGAGCTAATGAGGAATTAGAATCACCATTTAAAAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGTGCATTGGAGCTAATGAGGAATTAGAATCACCATTTAAAAGT  395

seq1  TTGGAAGACATCACAACTGTCAGGTTTTATTCAACTTTCATTTGAGAACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGACATCACAACTGTCAGGTTTTATTCAACTTTCATTTGAGAACC  445

seq1  AAGCATTAGAAAGTAACATCCAAATCTTCATTGTTAAGTCTTTGATCAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTAGAAAGTAACATCCAAATCTTCATTGTTAAGTCTTTGATCAAT  495

seq1  CAAACAAGATGAGACAGGAAAAATAAATCTATGTTAGGTTCTCCTTCAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAGATGAGACAGGAAAAATAAATCTATGTTAGGTTCTCCTTCAGG  545

seq1  CTGTGTGGTTGGTCTAGCTCAACTGTCTGGACAGAGCTCCTGCCAGCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGTTGGTCTAGCTCAACTGTCTGGACAGAGCTCCTGCCAGCCAA  595

seq1  AGCCTCAGACTCTTTGGACTGTCCCTGGTTAACCCATTATTTTAAGACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGACTCTTTGGACTGTCCCTGGTTAACCCATTATTTTAAGACAG  645

seq1  GAAAACTAGATCTAGACTTTTAAAAAGTTGTCAGGACCAAGAGGAAGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAGATCTAGACTTTTAAAAAGTTGTCAGGACCAAGAGGAAGACA  695

seq1  AGGTATTTTCATCTTTGGCAGGATCTAAGACTCATCAAACCCCAAGAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTTCATCTTTGGCAGGATCTAAGACTCATCAAACCCCAAGAGAA  745

seq1  GAAGTTCTGCTCTCTGTGAAGCCACAGAGGCTACAACCAGAACAGTATGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTGCTCTCTGTGAAGCCACAGAGGCTACAACCAGAACAGTATGA  795

seq1  ATTGAGAGTGCTCCCATGAGTGCACTAGGGCCAGCTACATGGCGACTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGTGCTCCCATGAGTGCACTAGGGCCAGCTACATGGCGACTGCT  845

seq1  GACCTTACAGTCTGAGGAACAGAACTGTGGGGCCTCTACAGAGCCTCAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTACAGTCTGAGGAACAGAACTGTGGGGCCTCTACAGAGCCTCAGG  895

seq1  TGATGAGGCGCTACTGGTTCATGATGAGAAGAAAACAACTCAGGCCAGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGCGCTACTGGTTCATGATGAGAAGAAAACAACTCAGGCCAGGT  945

seq1  GTGGTGGTGTACATCTTTAATTGTGCTGGGAGGCTAAGGTAGGCTGATGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTGTACATCTTTAATTGTGCTGGGAGGCTAAGGTAGGCTGATGC  995

seq1  CTGTGAATTC  1008
      ||||||||||
seq2  CTGTGAATTC  1005