BAC Information

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BAC

Clone NameB6Ng01-343D08
Chromosome1 (Build37)
Map Location 69,910,382 - 69,911,490
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneErbb4, LOC667842, EG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343D08.bB6Ng01-343D08.g
ACCGA126048GA126049
length1,2261,102
definitionB6Ng01-343D08.b B6Ng01-343D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaggtggactccagaaactcaaataaccccattaaaaaatg
gggctcagagctaaacaaaaaattctcacctgaggaatactgaatggcaa
agaagcacctgaaaaaatgttcaacatccttaatcatcagagaaatgcaa
atcaaaacaaccctgagattccatctcacaccagtcagaacggctaagat
caaaaattcaggtgacagcaggtgctggcaaggatgtggagaaagaggaa
cactcctccattgttggtgggattgcaagcttatacaatcactctggaaa
tcagtctggcagttcctcagaaaattggacacagtactactggaggatct
tgcaatacctctcctgggcatatatccagatgatgtcccaactggtaaga
aggacacatattccactatgttcatagcagccttatttataatagccaga
agctggaaagaacccagatgtccctcaacagaggaatggatacaaaaaat
gtgatacatttacacaatggagtactactcagctattaaaaggaatgaat
ttatgaaattcctaggcaaatgtttggacctggagggcatcatcctgagt
gaggtaacacaatcacaaaagaactcaaatgatatatgctcactgataaa
tggatattagcccagaaacttagtatacctgagatataagatacaatttg
caaaacacatgaatctgaagaagaaggaagaccaaagtgttgacactttg
ccccttcttagaattggaaacaatcacccatggaaggagttacagagaca
aaatttggagctgagtcaaaaggatggaccatctagagactgccatatcc
agggatccatcccataattagcctccaaacgatgacaccattgcatacac
tagcaagcatttgctgaaaggaccctgatataactgtctcttttgagact
aggctggcgcctagcaaacacataagtggatgctcacaggcagctattgg
atggatcacatggccccaatggaggagctagagaaaggtatcaggagcta
aggagatctgcaaccctgtagtgcacacatatgactacagtaccacggag
ctctgtctctagctgcatatggtatcaaagatggctagtcggcattcact
tggaaaaggagaggcattggactggctcttttattgccaggtcaggagaa
cgcctctaagggtccaaaaagtgtga

gaattctatactggcagtgtgtgagaattctatttgctccccaaacccca
aaagagaattggtagttttttctactttagcctttactcgatttgatagt
gatgtcttgtggttttgatatgcgatttgccaagagcaggtgataataaa
tgcaatattttgtgcttcttgtcccctttgcatttttggtatcagtattg
ccctttcatttaaagccatttgcctaattttgattaggtttttaattttg
ttattggattttatgattttttttctctttgagatactagacactttgta
tattgtatttcccttcagactgtggttttacattttacttcattactatg
atcttttaagagatttgattaaaagacttatatgcatatctgtgtgctgt
ggtatttgtatctgggttcttccctcagatgtgttggttatttatagatt
ctttgctttttcacataaaatttacaatcaatagaaaaaacacaagtgag
gtctagactaataagggcttgaacatagatctcgctagtgcatttctgtg
tgtatgtatatacatacatcttatggagggagaggtcgatgccttggtaa
ctctgagtcttctttctgcatggcactctatatagttatttcagtctatc
taatagtaaatatttatgaaacatcttgaaatgtgcacttttcacattga
cttaacatctatgtgcttcatgtaatgaagggcggccctcctgactgttg
tcccaggcagggcctgtcattgtgattttgctttagctgcagttggtgct
tatatgatatgctactatactttatgtttactgttaataatgtttagagt
agttgatgggttttatcttcataatacttttgggattaggctttgtttcc
ttcccatggtgggaatttaagcaactttttctaaggataaatgttgttcc
atttagaggattgttttctatttcagaatctttacactaatgaaatatta
tgcagactagaaaggctgtataaagagcccaaatatgtgatggagaaata
ctgagatccaacagaagtgtacctctttcttaacgaggcgacaacacttt
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69910382_69911490
seq2: B6Ng01-343D08.g_67_1168

seq1  GAATTCTATACTGGCAGTGTGTGAGAATTCTATTTGCTCCCCAAACCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACTGGCAGTGTGTGAGAATTCTATTTGCTCCCCAAACCCCA  50

seq1  AAAGAGAATTGGTAGTTTTTTCTACTTTAGCCTTTACTCGATTTGATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAATTGGTAGTTTTTTCTACTTTAGCCTTTACTCGATTTGATAGT  100

seq1  GATGTCTTGTGGTTTTGATATGCGATTTGCCAAGAGCAGGTGATAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTGTGGTTTTGATATGCGATTTGCCAAGAGCAGGTGATAATAAA  150

seq1  TGCAATATTTTGTGCTTCTTGTCCCCTTTGCATTTTTGGTATCAGTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTTTGTGCTTCTTGTCCCCTTTGCATTTTTGGTATCAGTATTG  200

seq1  CCCTTTCATTTAAAGCCATTTGCCTAATTTTGATTAGGTTTTTAATTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCATTTAAAGCCATTTGCCTAATTTTGATTAGGTTTTTAATTTTG  250

seq1  TTATTGGATTTTATGATTTTTTTTCTCTTTGAGATACTAGACACTTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGATTTTATGATTTTTTTTCTCTTTGAGATACTAGACACTTTGTA  300

seq1  TATTGTATTTCCCTTCAGACTGTGGTTTTACATTTTACTTCATTACTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATTTCCCTTCAGACTGTGGTTTTACATTTTACTTCATTACTATG  350

seq1  ATCTTTTAAGAGATTTGATTAAAAGACTTATATGCATATCTGTGTGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAAGAGATTTGATTAAAAGACTTATATGCATATCTGTGTGCTGT  400

seq1  GGTATTTGTATCTGGGTTCTTCCCTCAGATGTGTTGGTTATTTATAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGTATCTGGGTTCTTCCCTCAGATGTGTTGGTTATTTATAGATT  450

seq1  CTTTGCTTTTTCACATAAAATTTACAATCAATAGAAAAAACACAAGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTTTTCACATAAAATTTACAATCAATAGAAAAAACACAAGTGAG  500

seq1  GTCTAGACTAATAAGGGCTTGAACATAGATCTCGCTAGTGCATTTCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGACTAATAAGGGCTTGAACATAGATCTCGCTAGTGCATTTCTGTG  550

seq1  TGTATGTATATACATACATCTTATGGAGGGAGAGGTCGATGCCTTGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATATACATACATCTTATGGAGGGAGAGGTCGATGCCTTGGTAA  600

seq1  CTCTGAGTCTTCTTTCTGCATGGCACTCTATATAGTTATTTCAGTCTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCTTCTTTCTGCATGGCACTCTATATAGTTATTTCAGTCTATC  650

seq1  TAATAGTAAATATTTATGAAACATCTTGAAATGTGCACTTTTCACATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTAAATATTTATGAAACATCTTGAAATGTGCACTTTTCACATTGA  700

seq1  CTTAACATCTATGTGCTTCATGTAATGAAGGGCGGCCCTCCTGACTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATCTATGTGCTTCATGTAATGAAGGGCGGCCCTCCTGACTGTTG  750

seq1  TCCCAGGCAGGGCCTGTCATTGTGATTTTGCTTTAGCTGCAGTTGGTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAGGGCCTGTCATTGTGATTTTGCTTTAGCTGCAGTTGGTGCT  800

seq1  TATATGATATGCTACTATACTTTATGTTTACTGTTAATAATGTTTAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATATGCTACTATACTTTATGTTTACTGTTAATAATGTTTAGAGT  850

seq1  AGTTGATGGGTTTTATCTTCATAATACTTTTGGGATTAGGCTTTGTTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATGGGTTTTATCTTCATAATACTTTTGGGATTAGGCTTTGTTTCC  900

seq1  TTCCCATGGTGGGAATTTAAGCAACTTTTTCTAAGGATAAATGTTGTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGGTGGGAATTTAAGCAACTTTTTCTAAGGATAAATGTTGTTCC  950

seq1  ATTTAGAGGATTGTTTTCTATTTCAGAATCTTTACACTAATGAAATATAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTAGAGGATTGTTTTCTATTTCAGAATCTTTACACTAATGAAATATTA  1000

seq1  TGCAGACTAGAAAGGCTGTATAAAGAGCCCCAAATATGTGATGGAGAAAT  1050
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCAGACTAGAAAGGCTGTATAAAGAG-CCCAAATATGTGATGGAGAAAT  1049

seq1  ACTGAGAACCCAAACAGAAGTGTA-CTC-TTCTTAAAACAAAACAAAACA  1098
      ||||||| ||  |||||||||||| ||| |||||  ||| |  |     |
seq2  ACTGAGATCC--AACAGAAGTGTACCTCTTTCTT--AACGAGGC----GA  1091

seq1  AAACACTTTAT  1109
       ||||||||||
seq2  CAACACTTTAT  1102


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