BAC Information

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BAC

Clone NameB6Ng01-344N11
Chromosome1 (Build37)
Map Location 178,385,060 - 178,385,854
singlet/doubletsinglet
Overlap genenone
Upstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
Downstream geneCep170, Sdccag8, LOC666235, Akt3, Zfp238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N11.bB6Ng01-344N11.g
ACCGA127223GA127224
length7971,160
definitionB6Ng01-344N11.b B6Ng01-344N11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcattttgttcagaactttcaaatttagagctgcctgcctg
acagtgaactcaatgcttagcacccattaaaacctttgggaaaataagca
tgctagtaaaggaggtgatattttaacacaagagtctacatatgacccac
ctacttatgacccaggagccacaaatgtaagcaactcctgtttccatagg
ctcaagctttctctgtgactccttagaacctaaaagctcacacagcacct
actttaacagtgtgggttttcccagactaaatagagaaggctcattgtct
tgcagaaagcatataaacaggactctgcagagccatgcttctgacaggca
agaagctctacctcagaagtttgtctcttctactgagaacccataatctt
ctcagacagagtattgagtgtctcatcatgcaaggcgcatgatgaaagag
ctgctaaacatggagggtttgggagaaggaagggagctggaggcatatgt
attgctctgaccatctcaaacccacctctagcaaagatgaatctttctgg
gctggaaaatgtagaagttggtagagggctttcctaacatgcccaaagcc
ccagattaggtacccagcactgcataaattttgctgagatagttcatgtc
tgtaatcctggcactgagaaggtgaaagttcaaggtcattctttgaccat
gcaaggaagtagtagaaggtgagataaacataggttggcatgggctgtca
ctaatcagtagaggaagaaagggaaatctaaaaggacatcggggata
gaattcctgagcattcctagttttatttcttgtggagagctgtgccatga
gcaattgccattataagatggccctggcttccgctgtgcctaactagtaa
acaagccttgtgcgcaagtgcgagagtgaactcacgcctagtcactgccc
atctcggggcgtagtaatgaggtgatgggcgagcaacaaaccaggagctg
acatgccacatcaggtgctgaaacgccacgctgagggttatataagcagc
atcattttccggggtctgggtcttccctccttaagaagcaataaagcttg
ccgcagaagaatccggttgtccgagtgtgttcttgctggcaagaatgata
gctcaggacaagtggcgcccagaaacccgggaactgcataccatcaccgg
cgcaagggagatccccagttcgcagggcgggttcagaactgcgggacacg
taaggctctgtaaggtatgttcagtcttgaaatttctcctgtgttagagg
cctttttgtatgttttcacggggctcgttctttttcttttgatcacgtac
tgcttccaccgctggaactgctgactggttctcagtctcgatcaggcacg
gttagataacagggcagcaagcagtgtgggaacttcccactccgtagtga
ccgccttacggtcggtcttgaggcagtgtggcctaaaaatcgccactaag
acaatagagcgttttgttaaagagatagatcacgtagcaccgtggtatgc
atgctcagggtcattaaactatagcctcttgggagaaactgaaaggagat
ctagttagggaacagcagaatggcaaacttaaagcagggaccatgccatt
gtggaaactggtaagatcgtgcttaacagacgaggatgtcagcaaatggt
tgagcgggcagaagatactggaggaggttcaagacagtctatcagagaca
gagcgggagagagattagagtgaacgaacaggtgcatcgagaataaaggc
cttcacggtcttgagctgagaaagaaattagaaaaatgccctgggagagc
tagaaaggatggacggtaagatagaagaatcagctggagccactaggtag
gactatctcgcatgacgagtccagaccgtaatagctcgaatcgatataga
cacctagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_178385060_178385854
seq2: B6Ng01-344N11.b_50_846

seq1  GAATTCAAGGCATTTTGTTCAGAACTTTCAAATTTAGAGCTGCCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCATTTTGTTCAGAACTTTCAAATTTAGAGCTGCCTGCCTG  50

seq1  ACAGTGAACTCAATGCTTAGCACCCATTAAAACCTTTGGGAAAATAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAACTCAATGCTTAGCACCCATTAAAACCTTTGGGAAAATAAGCA  100

seq1  TGCTAGTAAAGGAGGTGATATTTTAACACAAGAGTCTACATATGACCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTAAAGGAGGTGATATTTTAACACAAGAGTCTACATATGACCCAC  150

seq1  CTACTTATGACCCAGGAGCCACAAATGTAAGCAACTCCTGTTTCCATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATGACCCAGGAGCCACAAATGTAAGCAACTCCTGTTTCCATAGG  200

seq1  CTCAAGCTTTCTCTGTGACTCCTTAGAACCTAAAAGCTCACACAGCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTTTCTCTGTGACTCCTTAGAACCTAAAAGCTCACACAGCACCT  250

seq1  ACTTTAACAGTGTGGGTTTTCCCAGACTAAATAGAGAAGGCTCATTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAACAGTGTGGGTTTTCCCAGACTAAATAGAGAAGGCTCATTGTCT  300

seq1  TGCAGAAAGCATATAAACAGGACTCTGCAGAGCCATGCTTCTGACAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAGCATATAAACAGGACTCTGCAGAGCCATGCTTCTGACAGGCA  350

seq1  AGAAGCTCTACCTCAGAAGTTTGTCTCTTCTACTGAGAACCCATAATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCTACCTCAGAAGTTTGTCTCTTCTACTGAGAACCCATAATCTT  400

seq1  CTCAGACAGAGTATTGAGTGTCTCATCATGCAAGGCGCATGATGAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAGAGTATTGAGTGTCTCATCATGCAAGGCGCATGATGAAAGAG  450

seq1  CTGCTAAACATGGAGGGTTTGGGAGAAGGAAGGGAGCTGGAGGCATATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAACATGGAGGGTTTGGGAGAAGGAAGGGAGCTGGAGGCATATGT  500

seq1  ATTGCTCTGACCATCTCAAACCCACCTCTAGCAAAGATGAATCTTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTGACCATCTCAAACCCACCTCTAGCAAAGATGAATCTTTCTGG  550

seq1  GCTGGAAAATGTAGAAGTTGGTAGAGGGCTTTCCTAACATGCCCAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAATGTAGAAGTTGGTAGAGGGCTTTCCTAACATGCCCAAAGCC  600

seq1  CCAGATTAGGTACCCAGCACTGCATAAA-TTTGCTGAGATAGTTCATGTC  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAGATTAGGTACCCAGCACTGCATAAATTTTGCTGAGATAGTTCATGTC  650

seq1  TGTAATCCTGGCACTGAGAAGGTGAAAGTTCAAGGTCATTC-TTGACCAT  698
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTAATCCTGGCACTGAGAAGGTGAAAGTTCAAGGTCATTCTTTGACCAT  700

seq1  GCAAGGAAGTAGTAGAAGGTGAGATAAACATAGGTTGGCAT-GGCTGTCA  747
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCAAGGAAGTAGTAGAAGGTGAGATAAACATAGGTTGGCATGGGCTGTCA  750

seq1  ACAAGAAGTAGAGGAAGAAAAGGGAATCTAAAAGGACATCGTGGGATA  795
        ||  |||||||||||||| || ||||||||||||||||| ||||||
seq2  CTAATCAGTAGAGGAAGAAAGGGAAATCTAAAAGGACATCG-GGGATA  797