BAC Information

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BAC

Clone NameB6Ng01-345N21
Chromosome1 (Build37)
Map Location 98,757,922 - 98,758,880
singlet/doubletsinglet
Overlap geneSlco4c1
Upstream geneGm1833
Downstream geneEG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346, D1Ertd622e, Hisppd1, Zh2c2, Pam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345N21.bB6Ng01-345N21.g
ACCGA127931GA127932
length1,142574
definitionB6Ng01-345N21.b B6Ng01-345N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggctgatggaaaggcatttgggagaaaaggcttgaggaatgga
tacgtctggggggtgatgcaaagatcatgctaggaaagaacaggattcct
ttgggggaaaatttgatgtcaaacaatcctttgttggggaaatggggaag
gatgactagtggaacaaagggcatgccaagagagaagcgcctgaggtggg
ttcaatgggaataacccccaaatggttcatatttaaattttaaaacggaa
ctatttgggagaaattacaaggagtgggcatgttacctgaggggtgtctc
tgaagctgggttttgagatttcgaaggcctagggtaacccaatgtcttct
tctctgcctcattctggtggagcagatgtaagctctcctccactactgct
ccagcgcctgcctgccatgctcctgatatgggtaaaccctctgaaacccc
aaagaaacctcttcttctttaaattaccttgtttgtgacattctgtcatg
gcaatagtaatataactaagacaacctctggtacgccaaaccataatttc
atctgaggcatttactagccctgaaagcgagccctagtctttttattgca
tatatttaaactaaaagtatttgttacattatattaggaagaagcctaaa
taaagatgagttccattaaaaaaaaaaaaaaaagaggtatcaaagaaaga
atcctcatggtcagacaaaatcatagcacctgtacagaattgacagctga
aataccttagaacttttttatgtcatgctttctttaatatagatgaacaa
atattccatatttcaactgaacaaacaagaaaactctgcccaagtataag
ataaaagacaagataaaaattagaaatcaactttcattatactccctttc
ttagagcaattgtttaaagtggggacaaccaacatcctatgtacaaactt
ctttctaacctacttatctttttttttaacattaagtatttatcactata
acatcccaatcactggcttgcaatccctctctcttcagtcccttccctcc
tcacgtctaacttcagctccaatgcactcatctcccttctagacgagggg
gctaaccctgaatacagcaggccttggcattccaagctacag

tcccaacatttcgacttccggcctagacctaggtcaaactgatggctaat
ggtcagcatatgaacccatccaacaagaggcggggcagattgggagtact
agagctcagctacctaactacaccaagccctacccaaactctgctgaagc
acgaagagatgaacttcaatctaatcttattaaaatcataatctcttaaa
gaggaaacgaataagacttttaaagaaatacagaaaaacacaatcaagca
ggtgaggaaaattaataataaaacagctcaagacatgaaaatggaaatag
aaacaataaagaaaacacaaactgagggtattctggagatggaagacata
aggaagagaagaggaattatagacccaattatcaccaatggaatacaaag
gatagaaaagagaattgtagtcatagaagatataattgaaaactgataca
tcagtcaatgaaaatgttaaatctaaaaagttcctgacaacatctaagaa
atctgggacaatatgaagaacaaacctaagaatactaagaatagaagagg
aggaggaggaggaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98757922_98758880
seq2: B6Ng01-345N21.b_233_1185

seq1  CCTGTGGTGGTTTCAATGAGAATAGCCCCCAAATGGTTCATATTTGAATT  50
      |||| ||||| ||||||| ||||| |||||||||||||||||||| ||||
seq2  CCTGAGGTGGGTTCAATGGGAATAACCCCCAAATGGTTCATATTTAAATT  50

seq1  TTTAAATGGAACTATCTGGTAAGAATTAGAAGGTGTGGTCTTGTTACATG  100
      || ||| |||||||| ||| |  ||||| |||| |||| | |||||| ||
seq2  TTAAAACGGAACTATTTGGGAGAAATTACAAGGAGTGGGCATGTTACCTG  100

seq1  AGGTGTGTCTCTGAAGCTGGGTTTTGAGATTTCAAAGGCCTAGGGTAACC  150
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGGGTGTCTCTGAAGCTGGGTTTTGAGATTTCGAAGGCCTAGGGTAACC  150

seq1  CAATGTCTTCTTCTCTGCCTCATTCTGGTGGAGCAGATGTAAGCTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTTCTTCTCTGCCTCATTCTGGTGGAGCAGATGTAAGCTCTCCT  200

seq1  CCACTACTGCTCCAGCGCCTGCCTGCCATGCTCCTGATATGGGTAAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACTGCTCCAGCGCCTGCCTGCCATGCTCCTGATATGGGTAAACCC  250

seq1  TCTGAAACCCCAAAGAAACCTCTTCTTCTTTAAATTACCTTGTTTGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCCCAAAGAAACCTCTTCTTCTTTAAATTACCTTGTTTGTGAC  300

seq1  ATTCTGTCATGGCAATAGTAATATAACTAAGACAACCTCTGGTACGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCATGGCAATAGTAATATAACTAAGACAACCTCTGGTACGCCAA  350

seq1  ACCATAATTTCATCTGAGGCATTTACTAGCCCTGAAAGCGAGCCCTAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAATTTCATCTGAGGCATTTACTAGCCCTGAAAGCGAGCCCTAGTC  400

seq1  TTTTTATTGCATATATTTAAACTAAAAGTATTTGTTACATTATATTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTGCATATATTTAAACTAAAAGTATTTGTTACATTATATTAGGA  450

seq1  AGAAGCCTAAATAAAGATGAGTTCCATTAAAAAAAAAAAAAAAAGAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTAAATAAAGATGAGTTCCATTAAAAAAAAAAAAAAAAGAGGTA  500

seq1  TCAAAGAAAGAATCCTCATGGTCAGACAAAATCATAGCACCTGTACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAGAATCCTCATGGTCAGACAAAATCATAGCACCTGTACAGAA  550

seq1  TTGACAGCTGAAATACCTTAGAACTTTTTTATGTCATGCTTTCTTTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCTGAAATACCTTAGAACTTTTTTATGTCATGCTTTCTTTAATA  600

seq1  TAGATGAACAAATATTCCATATTTCAACTGAACAAACAAGAAAACTCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAACAAATATTCCATATTTCAACTGAACAAACAAGAAAACTCTGC  650

seq1  CCAAGTATAAGATAAAAGACAAGATAAAAATTAGAAATCAACTTTCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTATAAGATAAAAGACAAGATAAAAATTAGAAATCAACTTTCATTA  700

seq1  TACTCCCTTTCTTAGAGCAATTGTTTAAAGT-GGGACAACCAACATCCTA  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TACTCCCTTTCTTAGAGCAATTGTTTAAAGTGGGGACAACCAACATCCTA  750

seq1  TGTACAAACTTCTTTCTAACCTACTTATCTTTTTTTTT-ACATTAAGTTA  798
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TGTACAAACTTCTTTCTAACCTACTTATCTTTTTTTTTAACATTAAG-TA  799

seq1  TTTATTCACTAT-ACATCCCAATCACT-GCTTGCCATCCCTCCTCTCTTT  846
      |||| ||||||| |||||||||||||| |||||| |||||| ||||||| 
seq2  TTTA-TCACTATAACATCCCAATCACTGGCTTGCAATCCCT-CTCTCTT-  846

seq1  CCAGTCCC-TCCCT-CTCACCTCTACTTTCAGCTCCCCATGCACTCATCC  894
       ||||||| ||||| ||||| ||||  ||||||| || ||||||||||| 
seq2  -CAGTCCCTTCCCTCCTCACGTCTAACTTCAGCT-CCAATGCACTCATC-  893

seq1  TCCCCTTCTTAGACGAGGGGAGGCCTACCCTGAATATCACCCAGCCTTGG  944
        |||||| ||||||||||  |||  |||||||||| || |  |||||||
seq2  -TCCCTTC-TAGACGAGGG--GGCTAACCCTGAATA-CAGCAGGCCTTGG  938

seq1  CATTTCAAGCTACAG  959
      |||| ||||||||||
seq2  CATTCCAAGCTACAG  953


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