BAC Information

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BAC

Clone NameB6Ng01-347H02
Chromosome1 (Build37)
Map Location 12,325,368 - 12,326,531
singlet/doubletsinglet
Overlap genenone
Upstream geneA830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347H02.bB6Ng01-347H02.g
ACCGA129041GA129042
length1,1621,157
definitionB6Ng01-347H02.b B6Ng01-347H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagggatactgaatggctgagaagcacctgaaaaaaat
gttcagcacccttaatgatcagggaaatgcaaatcaaaacaaccctgaga
tcccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcactctggcagttcctc
agaaaattggacatagtactaccagaggatccctcaatacctctcctggg
catatatccagaagatattccaaatgataggaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtgcatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacga
aagaactcacatgatgtactcactgataagtggatattagcccagatatg
tagaatacccaagatataagatacaatttatgaaactcatgatactaaag
aagaaagaagcccaaagtgtggccactttgccccttcttagaattggaaa
acatgaatggaaggagttacagagacaaagtttggagctgagatgaaaag
atggaccatctagagactgccatatccagggatccatcccataatcagcc
tccaaacgctgacaccattgcatacactagcaagattttgctgaaaggac
cctgatatagctgtctcttgtgagactatgccggggccctagcaaacaca
gaagtgaatgctcacagttaactattggatggatcacaggcccccagtgg
agagctagagaaagtacccaggagctaaaggatctgcacctataggtgac
acaacatgaactacagtactcctggagctcgtatctctagctgcatatat
attcagagatgcctagtcgccatcagtggaaagaaagccattactgtgca
actttaattgcctcagtacggaacccaggctcaaaatgggaataggttgg
catagggaagtg
gaattccaggccagctttgtctgcaatgaaagatggtgcttgaaaaataa
gggaagggatgattaatcagaatagactggggacatcagaacttattgga
gccaggaagatgtgttttcttaaagtagcatcaaaaccatggatcactta
aaattatgattgggagtcctttagatttaagcagtccactaaaaccagtg
gtagtgattaccgcatgcctatagtctctttcaatttcttccaaaaatga
tacagtggctgaaatacataagctattaaaactgaagagcaaacaggcag
ctagaatctaaagtgctaacatgccctttttaaatgggaacacatggcca
actggaatatgagcgtgcaaaatgaatggtactaccagtgactatgaatg
tggctggctgacaaatctagagtcaggatgcaaactgtttagctccttgt
ctagcctgcctcaccataacatcattcttgagccatttctcagtttcatg
ggtttcagcagaagcaacagacaacctcacagaaaacctcaccaattaga
tgatgttttctaaatgaaacttgtgggttgatccatggggtaggtgaagg
caaatgtagttactgtgatatttcacagatggagcaaaggacttatagtc
tttgagcctgcctttcctcacacataacaatatttaaattatttatgaat
tggggaaataaagacatcatggtgacatcatagtaattacattgctactt
atgactattcttttaatgaagacatggttaatattcacttgatgtttttt
gtaaactagaaagtaataatatggcttctcaacttaaacttgagggatgg
agataaacttctctaaaagaggggaaggaattcagatactgggctaattt
tcatatgtgtgtttgttttctgcccctttcttctggagtctaactttcat
gagaataatttatacatgtcttgatctagatagttatagaatgtttaaaa
atgagttaatgcatggattagtcactgagttcctcaacgtctgttagaga
ctgctgggttatgcttggtcaatataatagaccagatataggatggaagg
tgagagaatatttctaagcaaactgtatcaaccactaatctgtctatggc
tgcttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12325368_12326531
seq2: B6Ng01-347H02.g_65_1221 (reverse)

seq1  TTAAGCAGCCATAAGACAGATTTAGTGGTTGAAATACAGTTT-CTTAGGA  49
      |||||||||||| ||||||| ||||||||||  ||||||||| ||||| |
seq2  TTAAGCAGCCAT-AGACAGA-TTAGTGGTTG--ATACAGTTTGCTTAGAA  46

seq1  ATATTCTCTCCACTTTTCAATTCTATATCTGTTCTATTATAATTGA-CAA  98
      ||||||||||  |  ||| || ||||||||| |||||||| ||||| |||
seq2  ATATTCTCTCACC--TTCCATCCTATATCTGGTCTATTAT-ATTGACCAA  93

seq1  GCAT-ACCCAGCAGTCTCTAACAGACGTTGAGGGACTCAGTTGACTAATC  147
      |||| |||||||||||||||||||||||||||| |||||| |||||||||
seq2  GCATAACCCAGCAGTCTCTAACAGACGTTGAGGAACTCAG-TGACTAATC  142

seq1  CATGCATTTAACTCATTTTTAAACATTCTTATACTATCTTAGATTCAAGA  197
      |||||| ||||||||||||||||||||||   |||||| |||| ||||||
seq2  CATGCA-TTAACTCATTTTTAAACATTCTATAACTATC-TAGA-TCAAGA  189

seq1  CATGTATAAATTA-TCTCATGAAAGTTAGACTCCAGAAGAAAGGGGCAGA  246
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATGTATAAATTATTCTCATGAAAGTTAGACTCCAGAAGAAAGGGGCAGA  239

seq1  AAACAAACACACATATGAAAATTAGCCCAGTATCTGAATTCCTTCCCCTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACACATATGAAAATTAGCCCAGTATCTGAATTCCTTCCCCTC  289

seq1  TTTTAGAGAAGTTTATCTCCATCCCTCAAGTTTAAGTTGAGAAGCCATAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGAAGTTTATCTCCATCCCTCAAGTTTAAGTTGAGAAGCCATAT  339

seq1  TATTACTTTCTAGTTTACAAAAAACATCAAGTGAATATTAACCATGTCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTTCTAGTTTACAAAAAACATCAAGTGAATATTAACCATGTCTT  389

seq1  CATTAAAAGAATAGTCATAAGTAGCAATGTAATTACTATGATGTCACCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGAATAGTCATAAGTAGCAATGTAATTACTATGATGTCACCAT  439

seq1  GATGTCTTTATTTCCCCAATTCATAAATAATTTAAATATTGTTATGTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTTATTTCCCCAATTCATAAATAATTTAAATATTGTTATGTGTG  489

seq1  AGGAAAGGCAGGCTCAAAGACTATAAGTCCTTTGCTCCATCTGTGAAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGCAGGCTCAAAGACTATAAGTCCTTTGCTCCATCTGTGAAATA  539

seq1  TCACAGTAACTACATTTGCCTTCACCTACCCCATGGATCAACCCACAAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAACTACATTTGCCTTCACCTACCCCATGGATCAACCCACAAGT  589

seq1  TTCATTTAGAAAACATCATCTAATTGGTGAGGTTTTCTGTGAGGTTGTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAGAAAACATCATCTAATTGGTGAGGTTTTCTGTGAGGTTGTCT  639

seq1  GTTGCTTCTGCTGAAACCCATGAAACTGAGAAATGGCTCAAGAATGATGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTCTGCTGAAACCCATGAAACTGAGAAATGGCTCAAGAATGATGT  689

seq1  TATGGTGAGGCAGGCTAGACAAGGAGCTAAACAGTTTGCATCCTGACTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGAGGCAGGCTAGACAAGGAGCTAAACAGTTTGCATCCTGACTCT  739

seq1  AGATTTGTCAGCCAGCCACATTCATAGTCACTGGTAGTACCATTCATTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTCAGCCAGCCACATTCATAGTCACTGGTAGTACCATTCATTTT  789

seq1  GCACGCTCATATTCCAGTTGGCCATGTGTTCCCATTTAAAAAGGGCATGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCTCATATTCCAGTTGGCCATGTGTTCCCATTTAAAAAGGGCATGT  839

seq1  TAGCACTTTAGATTCTAGCTGCCTGTTTGCTCTTCAGTTTTAATAGCTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTTTAGATTCTAGCTGCCTGTTTGCTCTTCAGTTTTAATAGCTTA  889

seq1  TGTATTTCAGCCACTGTATCATTTTTGGAAGAAATTGAAAGAGACTATAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCAGCCACTGTATCATTTTTGGAAGAAATTGAAAGAGACTATAG  939

seq1  GCATGCGGTAATCACTACCACTGGTTTTAGTGGACTGCTTAAATCTAAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCGGTAATCACTACCACTGGTTTTAGTGGACTGCTTAAATCTAAAG  989

seq1  GACTCCCAATCATAATTTTAAGTGATCCATGGTTTTGATGCTACTTTAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCAATCATAATTTTAAGTGATCCATGGTTTTGATGCTACTTTAAG  1039

seq1  AAAACACATCTTCCTGGCTCCAATAAGTTCTGATGTCCCCAGTCTATTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATCTTCCTGGCTCCAATAAGTTCTGATGTCCCCAGTCTATTCT  1089

seq1  GATTAATCATCCCTTCCCTTATTTTTCAAGCACCATCTTTCATTGCAGAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCATCCCTTCCCTTATTTTTCAAGCACCATCTTTCATTGCAGAC  1139

seq1  AAAGCTGGCCTGGAATTC  1164
      ||||||||||||||||||
seq2  AAAGCTGGCCTGGAATTC  1157